Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001640265.1_202016-
05-08] 1,098 sequences; 22,339,351 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq147 120 7e-22
seq58 104 6e-17
seq61 96.9 8e-15
>seq147
Length=47883
Score = 120 bits (132), Expect = 7e-22
Identities = 146/198 (74%), Gaps = 6/198 (3%)
Strand=Plus/Plus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| |||||||| || ||||| | | || | ||||||||||| || || || || ||
Sbjct 16300 TTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCGTCTTCTAACTGCTTACCGGCAAA 16359
Query 288342 GATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398
||||| | ||||| |||| ||||| ||||| || || || ||||||| || ||
Sbjct 16360 GATCAATCTTTGTTG---ATCTGGAGGGATACCTTCCTTGTCTTGAATTTTCGACTTAAC 16416
Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458
||| || || | |||| ||||| ||||| | || || || || ||||||| ||||||
Sbjct 16417 GTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTT 16476
Query 288459 GACGAATATCTGCATTAT 288476
|||||| |||||||| ||
Sbjct 16477 GACGAAAATCTGCATAAT 16494
>seq58
Length=101919
Score = 104 bits (114), Expect = 6e-17
Identities = 138/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| |||||||| || ||||||| | || | || ||||| ||||| || || || ||
Sbjct 8589 TTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAA 8530
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
||||| | ||||| | ||| || ||||| || || ||||| || | || || ||
Sbjct 8529 GATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTGGACTTGACATT 8470
Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
|| |||| || ||||| ||||| || || || ||||| ||||| | |||||||||
Sbjct 8469 GTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGAC 8410
Query 288462 GAATATCTGCAT 288473
||| || |||||
Sbjct 8409 GAAAATTTGCAT 8398
>seq61
Length=97283
Score = 96.9 bits (106), Expect = 8e-15
Identities = 136/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| |||||||| || ||||| | | || | |||||||| ||||| || || || |||
Sbjct 94372 TCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCGTCTTCCAATTGCTTACCAGCAAAG 94431
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|||| | ||||| | ||| || ||||| || || || || || | || || ||
Sbjct 94432 ATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGAATCTTAGACTTGACATTG 94491
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| |||| || ||||| ||||| || || || ||||| ||||| | ||||||||||
Sbjct 94492 TCAATAGTGTCTGAAGATTCAACTTCAAGGGTAATAGTCTTACCGGTTAAAGTCTTGACG 94551
Query 288463 AATATCTGCAT 288473
|| || |||||
Sbjct 94552 AAAATTTGCAT 94562
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179637804474444
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |