Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001640265.1_202016- 05-08] 1,098 sequences; 22,339,351 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq245 132 1e-25 seq219 91.5 3e-13 >seq245 Length=26884 Score = 132 bits (146), Expect = 1e-25 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 334137 TCGAGATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAGC 334196 |||| |||||||||||| ||| |||| | ||||| || ||||||||| |||| Sbjct 24243 TCGATATCGTGTTCCACATAAACAGTGCGACATTCATCCTGAGTGGGGAACCCGTCAACT 24302 Query 334197 TGACCGTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCCGTTTGGCCCACACAGA 334256 || || || |||| | ||||| ||||| ||||| || || || || || ||||| ||| Sbjct 24303 TGGCCATTAGCAATGGATCGCATTAGAGTGGATTTTCCGGCACCATTAGGACCACATAGA 24362 Query 334257 CCGTAGCGGTTTCCACGCTTCAGATTGAACCGCGTATTGTTCAGAAGAATTTTTCCACCA 334316 || || | | || ||||||| | || | || ||||| || | ||||| ||||| Sbjct 24363 CCATATCTCCTACCTCGCTTCAACCTCAATTGAGTCTTGTTTAGTAATATTTTGGCACCA 24422 Query 334317 TATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 334354 ||||||| ||||||||||||| ||||| ||| ||||| Sbjct 24423 TATGCCAAGGAAAATTCACAATTACACAAATCTTCACC 24460 >seq219 Length=30728 Score = 91.5 bits (100), Expect = 3e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 334137 TCGAGATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAGC 334196 |||| ||||||||||| ||| | || | |||| || |||||| || |||| Sbjct 5503 TCGATGTCGTGTTCCACATAAACGGTGCGACATTCATCTTGAGTGGGGAAGCCGTCAACT 5444 Query 334197 TGACCGTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCCGTTTGGCCCACACAGA 334256 ||||| || ||| | ||||| ||||| ||||| || || || || |||||||| ||| Sbjct 5443 TGACCATTGGCAACCGAACGCATTAGAGTGGATTTCCCAGCACCATTAGGCCCACATAGA 5384 Query 334257 CCGTAGCGGTTTCCACGCTTCAGATTGAACCGCGTATTGTTCAGAAGAATTTTTCCACCA 334316 || || | | || | |||| | | | || ||||| || | || || ||||| Sbjct 5383 CCATACCTTCTACCCCTTTTCAACCTTAGTTGAGTTTTGTTTAGCAAGATCTTGGCACCA 5324 Query 334317 TATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 334354 ||||||| |||||| ||||| | ||| | ||| ||||| Sbjct 5323 TATGCCAAAGAAAACTCACAGTTACATAAATCTTCACC 5286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102864484546300