Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001640265.1_202016-
05-08] 1,098 sequences; 22,339,351 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq17 109 5e-19
seq155 107 2e-18
seq99 107 2e-18
seq147 96.9 3e-15
seq111 95.1 1e-14
seq61 87.8 2e-12
seq41 82.4 8e-11
>seq17
Length=175543
Score = 109 bits (120), Expect = 5e-19
Identities = 159/221 (72%), Gaps = 4/221 (2%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| ||| | |||||||||||||| | || |||||||| || |||||||| |
Sbjct 134277 CCACCTCTCAATCTCAAAACTAAATGTAAAGTGGATTCCTTTTGGATATTGTAGTCAGAC 134336
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || | ||| || | ||| ||||| | | |||||| | |||||||| |||||
Sbjct 134337 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGAGGA 134396
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG--TTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565
|||||||| ||||| ||| | |||| || |||| || | |||||| | || || |
Sbjct 134397 ATACCTTCCTTGTC-TTGAATCTTTGACTTGACATTG-TCAATGGTGTCAGAAGATTCAA 134454
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAA 138606
| || | || | || |||||||||| |||||| ||||||
Sbjct 134455 CTTCCAAAGTGATGGTCTTACCAGTCAAAGTTTTGACAAAA 134495
>seq155
Length=44513
Score = 107 bits (118), Expect = 2e-18
Identities = 291/437 (67%), Gaps = 9/437 (2%)
Strand=Plus/Minus
Query 52404 GTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTTAC 52463
|| |||||||| |||| || || || || ||||| ||| ||| ||||||| |
Sbjct 43584 GTCGCCTTCGCGTCCATCGAAGGTGTTTTCTTCTCCGGGTCCTTCGCCTCCATCTTCTGG 43525
Query 52464 ATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCGAC 52523
| || | || ||| || |||||||| |||| ||| |||||||||||| | | |||
Sbjct 43524 TTGAAGAAGAGAGGTATGATGCCCGGGTTGACCTTCTCCAACGAGTTGATCTGCAGAGAC 43465
Query 52524 GAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAAGACGCGCGTGACCGAAAAATTG 52583
||||| ||||||| |||||||| || | | | | | | ||| | || |
Sbjct 43464 GAAGGTTTGCACACCGACTTTGCCTGTTTGTTGTTC---GCCCATTTGAAGAACAAGCCG 43408
Query 52584 GATTCGGACACGATCCTGAGCATGTTCAAGGAGGCGGTGGCTATCGAA-AAGGAGTTTTT 52642
|| | | || || || || ||| ||||| || | |||||| || || | ||
Sbjct 43407 GACCCAGCCATCGTCGAGAAAATCGTCACCGAGGCCGTCGAGATCGAACAAAGA-TACTT 43349
Query 52643 TACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCATGTGCGAGTACAT 52702
| ||| |||| |||| |||| || ||||| || | | ||| | ||||| |
Sbjct 43348 CCTAGACGCCTTGCCAGTCGCCTTGCTAGGTATGAATGCCGACTTGATGAACCAGTACGT 43289
Query 52703 CGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCA-AAGTACTTCAACGCTC 52761
|||||| || || || | |||||||| | || || | | | ||||||| ||| | ||
Sbjct 43288 CGAGTTCGTCGCAGACAGACTGTTGGT-CGCCTTCGGTAACAAGAAGTACTACAA-GGTC 43231
Query 52762 G-CAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTTCGAG 52820
| ||| || || || || ||| | |||||||| | | || ||||||||||| |||||
Sbjct 43230 GACAACCCCTTCGATTTCATGGAAAACATTTCCTTGGCCGGTAAGACCAACTTCTTCGAA 43171
Query 52821 AAGCGAGTCGGCGAGTA 52837
||| ||||| ||| ||
Sbjct 43170 AAGAGAGTCTCCGACTA 43154
>seq99
Length=71790
Score = 107 bits (118), Expect = 2e-18
Identities = 158/220 (72%), Gaps = 4/220 (2%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| ||| | ||| |||||||||| | || ||||||||||||||||||||| |
Sbjct 32471 CCACCTCTCAATCTCAAGACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGAC 32412
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || | ||| || | ||| ||||| | | |||| | | |||||||| || ||
Sbjct 32411 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 32352
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565
|||||||||||||| ||| | || | ||| | |||| | | |||||| | || || |
Sbjct 32351 ATACCTTCTTTGTCT-TGAATCTTGGATTTGACATTGT-CAATGGTGTCAGAAGATTCAA 32294
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAA 138605
| || | || | ||||||||||||| ||| || || ||
Sbjct 32293 CTTCTAGAGTGATGGTTTTACCAGTCAAAGTCTTAACGAA 32254
>seq147
Length=47883
Score = 96.9 bits (106), Expect = 3e-15
Identities = 161/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| ||| | ||| || || || | | || ||||| ||||||||||| || |
Sbjct 16037 CCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTCTGAATGTTGTAATCAGAC 16096
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || | ||| || || || ||||||| | |||| | | ||||| || |||||
Sbjct 16097 AGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGG 16156
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565
|||||||| ||||| ||| |||| | |||| ||| || | ||| |||| || || |
Sbjct 16157 ATACCTTCCTTGTC-TTGAATTTTCGACTTAACGTTG-TCGATGGTATCGGAAGATTCAA 16214
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
| || | || | |||||||| |||| ||| || ||||| ||||||||
Sbjct 16215 CTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 16263
Score = 96.9 bits (106), Expect = 3e-15
Identities = 161/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| ||| | ||| || || || | | || |||||||| ||||||||||| |
Sbjct 16265 CCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 16324
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || | ||| || | || ||||||| | |||| | | ||||| || |||||
Sbjct 16325 AAGGTTCTACCGTCTTCTAACTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGG 16384
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565
|||||||| ||||| ||| |||| | |||| ||| || | ||| |||| || || |
Sbjct 16385 ATACCTTCCTTGTC-TTGAATTTTCGACTTAACGTTG-TCGATGGTATCGGAAGATTCAA 16442
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
| || | || | |||||||| |||| ||| || || |||||||||||
Sbjct 16443 CTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 16491
Score = 91.5 bits (100), Expect = 1e-13
Identities = 140/196 (71%), Gaps = 4/196 (2%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||||||||| |||||||| || || | || || ||||| ||||||| |
Sbjct 15614 GACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTCTAGTTGCTTACCGGCA 15673
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539
| || | | || ||||| ||||| |||||||| ||||| ||| |||| | ||||
Sbjct 15674 AAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTC-TTGAATTTTCGACTTAAC 15732
Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598
||| || | ||||||| || || ||||| | || | || || || || |||||||
Sbjct 15733 GTTG-TCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTT 15791
Query 138599 TTACAAAAATCTGCAT 138614
| || ||||| |||||
Sbjct 15792 TGACGAAAATTTGCAT 15807
>seq111
Length=63476
Score = 95.1 bits (104), Expect = 1e-14
Identities = 137/191 (72%), Gaps = 2/191 (1%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
||||||||||||||||| ||||| || ||| | ||| || ||||| ||||||| |
Sbjct 63287 GACTCCTTTTGAATGTTATAGTCCGACAAAGTTCTGCCGTCTTCCAGTTGCTTACCGGCA 63346
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGT-CGGTGATTTTTTGTTTTAA 138539
| || | | ||||||||||||||| || || ||||| | | || || | ||| |
Sbjct 63347 AAAATCAACCTCTGTTGGTCCGGAGGAATGCCCTCTTTATCCTGTATCTTACTCTTTACA 63406
Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599
||| || | ||||||| ||||| ||||| | || | || ||||| || | ||| ||
Sbjct 63407 TTG-TCGATCGTGTCGGAGGACTCGACCTCCAAAGTAATGGTCTTACCGGTTAAAGTCTT 63465
Query 138600 TACAAAAATCT 138610
|| |||||||
Sbjct 63466 GACGAAAATCT 63476
>seq61
Length=97283
Score = 87.8 bits (96), Expect = 2e-12
Identities = 159/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| ||| | |||||| || |||| | ||||||||||| ||||||||||| |
Sbjct 94336 CCACCTCTCAATCTCAAAACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 94395
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||| | ||| || | ||| ||||| | | |||| | | |||||||| || ||
Sbjct 94396 AAAGTTCTGCCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 94455
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG--TTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565
|||||||| ||||| ||| | || | || |||| || | ||||| | || || |
Sbjct 94456 ATACCTTCCTTGTC-TTGAATCTTAGACTTGACATTG-TCAATAGTGTCTGAAGATTCAA 94513
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
| || | || | || ||||| || | ||| || || ||||| |||||
Sbjct 94514 CTTCAAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 94562
>seq41
Length=123922
Score = 82.4 bits (90), Expect = 8e-11
Identities = 153/221 (69%), Gaps = 4/221 (2%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| ||| | ||| ||||| || | | || || ||||||||||||||||| |
Sbjct 80807 CCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 80866
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || | ||| || | ||| ||||| | | |||| | | |||||||| || ||
Sbjct 80867 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 80926
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG--TTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565
|||||||| ||||| ||| | |||| || |||| || | ||||| | || || |
Sbjct 80927 ATACCTTCCTTGTC-TTGAATCTTTGACTTGACATTG-TCAATAGTGTCAGAAGATTCAA 80984
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAA 138606
| || | || | || |||||||||| ||| || ||||||
Sbjct 80985 CTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAAA 81025
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496255588798560
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