Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001640265.1_202016- 05-08] 1,098 sequences; 22,339,351 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq131 183 4e-41 seq26 170 2e-37 >seq131 Length=54043 Score = 183 bits (202), Expect = 4e-41 Identities = 829/1301 (64%), Gaps = 36/1301 (3%) Strand=Plus/Minus Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962 || || |||| ||| ||| || || || ||||| | |||||| ||||||| |||||| Sbjct 49156 TACATATTGGAAGTGACTGGTTCGAAACATTCATTATAACCCAATATTTGGGATGTGGAT 49097 Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATG-CGTTC 116021 || || ||||| ||||||||| | | || | | ||| | | | || | || Sbjct 49096 GCAGTAGGCATTGGTGCCATGGTCAAGGAATTTCTAATACCATGCTTCATGATATCTTTT 49037 Query 116022 CTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAG 116081 ||| ||| |||||| || | || | | | ||||||||||||||||| || Sbjct 49036 CTTAAGGT-GTCCCAATCCCACATGCCGTAGGGTTTTTGGTCCCACATATCAAACTGTAG 48978 Query 116082 GATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAA 116141 |||||||| || || || ||||| | || || || ||||| || || || || | Sbjct 48977 TATACCTTGAGAAGCAGGAGATCCTTGGAAAGTTTCGTATGGACCGTCCTTCTGAGCTAG 48918 Query 116142 TTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGC 116201 ||| | || || | || || ||||| || || ||||| || | ||| | Sbjct 48917 TTCACAAGAAGCTTCCATGGAGGCATGATAAATAGTTTCAAAGATTTGGATATTTAGCAA 48858 Query 116202 CTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTG 116261 ||| || || |||||||| | | ||| ||| || || || ||||||||||| Sbjct 48857 ACGGGCTTCCTCAGAATCAAATGGCAAACGTAACAGCATGAAAGTGTCAGCGAGACCTTG 48798 Query 116262 GACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATA 116321 ||||| | ||||||| | |||||||||||| || |||| || || || || || Sbjct 48797 AACACCCAAAGCAATTGGTCTATGTCTCATATTGGATTTTCTCGCTTCTTCAACAGGGTA 48738 Query 116322 AAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAG 116381 |||| | ||| || || || |||| ||| || ||||| || | |||||||| | Sbjct 48737 GTAATTACGATCAATGACTCTGTTTAAATTACGAGTAACAACTTTAGCAATTTCATGTAA 48678 Query 116382 CTTTTCGTAATCAAAACTGCGAGTCT---------------CTTCATTGACATACTTAGG 116426 |||| | | | | || ||||| |||| ||| || || || Sbjct 48677 TTTTTTGAAGTTGTATGTGGAAGTCTTACCATCCTCAGAAGTTTCAATGA-ATGCT--GG 48621 Query 116427 AAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAAT 116486 | ||| | || |||| ||||| |||| || ||||| | | | ||| || | ||| Sbjct 48620 TAAGGCAACGGAAGCCAAGTTACAAACAGCAGTTTCATCTGGAGCTGAGTATTCAACAAT 48561 Query 116487 TTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTT 116546 ||| || || ||||| ||| ||| || ||||| |||||||| || ||| |||| Sbjct 48560 TTCACAGCATAAGTTTGATGACTTGATGACACCTAAGTTTTTTTGATTAGATTTTCTGTT 48501 Query 116547 ACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGC 116606 ||| ||||||||||| | | | || || || || || ||||| | | | ||| | Sbjct 48500 ACAAGCATCCTTGTAAACAACGAAAGGTGTACCAGTTTCAGTTTGAGCTTCCAAAATGGA 48441 Query 116607 CTTCCATACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGT 116666 | ||||| | |||| | ||| || | || || || | |||||| || Sbjct 48440 ATACCATAATTTTTGGGCTTTGATAGT---CTTACCACGACCTTCTTTCTCGTAGCGGGT 48384 Query 116667 GTAGAGGGCCTCAAACTCTTCACC--CACAGCCTCTGAGAGCCCTGGTGCCTTAT-CTGG 116723 || || ||||||||||| ||||| ||| | || | | || || | || || ||| Sbjct 48383 ATATAGAGCCTCAAACTCGTCACCGTAACAATCGCTTAAA--CCAGGAG-CTGATGTTGG 48327 Query 116724 ACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCA 116783 | |||| | | ||| ||| || || || ||||||||||| || || || ||||| Sbjct 48326 AGAGAATAATGTCCAGGTCCCATTTTCTTCGACACGCTTCATGAAAAGATCAGGAATCCA 48267 Query 116784 GAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTC 116843 || || | ||| | ||| | ||| ||| || | || || || | | || Sbjct 48266 TAGAGCAGGGAACAAATCTCTTGCACGAATTTCCTCTTTACCGTGGTTCTTCCTAATATC 48207 Query 116844 CAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACC---CCT 116899 | ||| || | ||||| || ||||| ||||||||||| | || | | ||| || Sbjct 48206 AATAAAATCAAATATATCAGCATGCCATGGTTCCAGGTAAAGGGCAAACGCACCAGGTCT 48147 Query 116900 TGCGACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAA 116959 | | |||| |||||| ||||| | || || || || || |||| ||| |||| Sbjct 48146 T-TTATTACCACCCTGGTCAACATAACGGGCAGTGTTATTGAAAACACGAATCATAGGAA 48088 Query 116960 TGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAG-ACTTGTTGGCTCTGACATCG 117018 | | ||| | ||| || ||||| || ||| || || ||| | | | | Sbjct 48087 TTAAACCGTTAGAAGTACCGTTTGTACCAGCAATGTAAGAACCAGTT-GAACGAATGTTA 48029 Query 117019 TGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTG 117078 ||||| || | ||||||||| || || || || || || || ||| | | || Sbjct 48028 TGGATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAGGTG 47969 Query 117079 CCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGT 117138 |||| ||||| ||||| ||||| |||| | || | | ||| || |||||||| Sbjct 47968 TCGTAAATCCCCTCGATAGAGTCCTCCTTCATGGCAACCAAGAAACAAGAGGACATTTGA 47909 Query 117139 GGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTG 117179 || |||| ||||| || ||||| | ||||| | ||||| Sbjct 47908 GGTTTTGGAGTACCGGCATTGAACAACGTTGGAGAGGCGTG 47868 >seq26 Length=155086 Score = 170 bits (188), Expect = 2e-37 Identities = 820/1292 (63%), Gaps = 34/1292 (3%) Strand=Plus/Plus Query 115902 ATAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGA 115961 ||| ||||||| || ||| || || ||||| |||| ||| ||||| || | |||||| Sbjct 131663 ATACATGTTGGAAGTAACTGGTTCGAAACACTCGTTGTAACCTAAGATCTGAGATGTGGA 131722 Query 115962 GGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTC 116021 || || ||||| ||||||||| | ||| | | ||| | || | ||| | Sbjct 131723 TGCAGTAGGCATAGGTGCCATGGTCAAAGAGTTTCTAATACCATGCTCCATGATGTTATT 131782 Query 116022 CTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAG 116081 | || | |||||| || | | | || | |||||||| || || || || Sbjct 131783 TCTCAGAGTGTCCCAATCCCACATACCGTATGGTTTTTGGTCCCACATGTCGAATTGAAG 131842 Query 116082 GATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAA 116141 |||||||| || || || || || | ||| || || |||||||| || | || || Sbjct 131843 TATACCTTGAGAAGCCGGGGAGCCTTTAAAGGTTTCGTATGGGCCATCTCTTTGAGCTAA 131902 Query 116142 TTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATT-- 116199 ||| | || || | || || || || || || || || || || ||| | | Sbjct 131903 TTCACAAGAAGCTTCCATGGAGGCATGGTAGATAGTTTCGAAGATTTGAATATTTAGTAA 131962 Query 116200 GCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCT 116259 || | || || || || || || | | ||| |||| || || || || | |||| Sbjct 131963 GCGT--GCTTCTTCTGAGTCGAATGGCAAACGCAACAACATGAAAGTGTCAGCCAAACCT 132020 Query 116260 TGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGA 116319 |||||||| | |||| || | ||||||||||||||| ||| || ||| || ||| Sbjct 132021 TGGACACCCAAAGCAATCGGCCTATGTCTCATATTAGATCTTCTTGCTTCCTCGACAGGA 132080 Query 116320 TAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGA 116379 ||| | || | || ||||| | |||| || || | ||| || | |||||||| Sbjct 132081 TAATAGTTACGGTCAATAACGTTGTTTAAGTTACGAGTAATAACTTTAGAAATTTCATGT 132140 Query 116380 AGCTTTTCGTAATCAAAACTGCGAGTCT------CTTCA----TTGACATACTTA--GGA 116427 ||||||| | | | | | ||| | ||||| || ||| | || Sbjct 132141 AGCTTTTTGAAGTTGTATGTAGAAGTTTTGCCGTCTTCAGATGTTTCAATAAATGCTGGC 132200 Query 116428 AGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATT 116487 | || | || |||| ||||| |||| |||||||| | ||| ||| || | |||| Sbjct 132201 AAAGCAACAGAAGCCAAGTTACAAACAGCAGTCTCATCTGGAGCAGAGTATTCAACAATT 132260 Query 116488 TCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTA 116547 || |||||||| || ||| || |||||||||||||| || || || ||||| Sbjct 132261 TCACAGCACAAATTAGATGACTTGATAACACCCAAGTTCTTTTGGTTGGATTTCCTGTTA 132320 Query 116548 CACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCC 116607 || ||||||||||| | | | |||| || || || |||||||| | | | |||| Sbjct 132321 CAAGCATCCTTGTAAACAACAAATGGTGTACCAGTTTCCGTTTGTGCTTCCAAGATAGAG 132380 Query 116608 TTCCATACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTG 116667 | ||||| | ||| | ||| || | || || || | ||||| || Sbjct 132381 TACCATAATTTTTGGGCCTTGATAGT---CTTACCACGACCTTCTTTTTCGTAACGGGTA 132437 Query 116668 TAGAGGGCCTCAAACTCTTCACC--CACAGCCTCTGAGAGCCCTGGTGCCTTATCT-GGA 116724 || ||||| || || || ||||| |||| | || | || ||||| | | || | ||| Sbjct 132438 TATAGGGCTTCGAATTCATCACCGTAACAGTCACTCA-AG-CCTGG-GGCAGATGTAGGA 132494 Query 116725 CAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAG 116784 |||| | || ||| || || || || ||||||||||| || ||||| | ||| Sbjct 132495 GAGAATAAAGTCCAAGTGCCGTTTTCTTCGACACGCTTCATGAAAAGATCTGGAACCCAT 132554 Query 116785 AGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCC 116844 || || | ||| | ||| | || |||||| | || ||||| | | || Sbjct 132555 AGAGCAGGGAATAAATCTCTCGCACGGATTTCTTCCTTACCGTGATTCTTTCTAATGTCG 132614 Query 116845 AAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-AC-----CCC 116898 | ||||| | |||||| |||||||| || |||| || | || | | || | | Sbjct 132615 ATGAAGTCGAAGATATCAGCGTGCCATGGCTCCAAATATAGAGCAAAGGCACCAGGTCTC 132674 Query 116899 TTGCGACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGA 116958 ||| |||| | |||| ||||| | || || ||| || || || | ||| ||| Sbjct 132675 TTG---TTACCACCTTGGTCAACATAACGGGCAGTATTGTTGAAGACACGGATCATAGGA 132731 Query 116959 ATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTGTTGGCTCTGACATCG 117018 || | || | ||| || ||||| || ||| ||| | | || | | | | Sbjct 132732 ATTAACCCGTTAGAAGTCCCGTTTGTACCAGCAATGTAAGAGCCGGTTGCACGAATGTTG 132791 Query 117019 TGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTG 117078 ||||| || | ||||||||| || || || || || || || ||| | | | | Sbjct 132792 TGGATATGTAGACCAATACCTCCAGCAGTTTTAGAAATCAAAGCACATTCCTTCAAAGTA 132851 Query 117079 CCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGT 117138 |||| || || || || || ||| |||| |||| | | ||| ||| |||||||| Sbjct 132852 TCGTAAATACCTTCAATGGAATCATCCTTCATTGCAACTAAGAAACAGGAGGACATTTGA 132911 Query 117139 GGCCTTGGTGTACCAGCGTTGAAGAGGGTTGG 117170 ||| |||| |||||||||||||| | ||||| Sbjct 132912 GGCTTTGGAGTACCAGCGTTGAATAAAGTTGG 132943 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613498779613680