Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001640265.1_202016- 05-08] 1,098 sequences; 22,339,351 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq155 237 2e-57 seq166 113 5e-20 >seq155 Length=44513 Score = 237 bits (262), Expect = 2e-57 Identities = 562/836 (67%), Gaps = 21/836 (3%) Strand=Plus/Plus Query 132604 TTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGC 132663 ||||| || ||| || | || || || || || || || || ||||||||||| Sbjct 43148 TTTTGGTAGTCGGAGACTCTCTTTTCGAAGAAGTTGGTCTTACCGGCCAAGGAAATGTTT 43207 Query 132664 GTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTG---CCGATCAGGTCGACG 132720 ||| ||||| ||||||||| | ||||||| ||| || |||| ||| |||| Sbjct 43208 TCCATGAAATCGAAGGGGTTGTCGACCTTGTAGTACTTCTTGTTACCGA--AGG-CGACC 43264 Query 132721 AGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGC 132780 | ||| ||||| || |||||||||| ||| || ||| ||| ||| | || ||| Sbjct 43265 AACAGTCTGTCTGCGACGAACTCGACGTACTGGTTCATCAAGTCGGCATTCATACCTAGC 43324 Query 132781 AGACGC-ACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGAC 132839 | | || || |||| || || || | | ||| ||||| |||| || |||||||| Sbjct 43325 A-AGGCGACTGGCAAGGCGTCTAGGAAGTATCTTTGTTCGATCTCGACGGCCTCGGTGAC 43383 Query 132840 GATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGC 132899 ||||| | ||| || | | |||| | | |||||| ||||| ||| || || Sbjct 43384 GATTTTCTCGACGATGGCTGGGTCCGGCTTGTTCTTCAAATGGGCGAACAACAAACAGGC 43443 Query 132900 AAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGG 132959 ||||||| ||||| || ||||| ||| | || | |||||| ||| ||||| ||||| Sbjct 43444 AAAGTCGGTGTGCAAACCTTCGTCTCTGCAGATCAACTCGTTGGAGAAGGTCAACCCGGG 43503 Query 132960 CATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCC 133019 ||| | || | || || | ||| || |||| |||||| || || ||||| || || Sbjct 43504 CATCATACCTCTCTTCTTCAACCAGAAGATGGAGGCGAAGGACCCGGAGAAGAAAACACC 43563 Query 133020 CTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTG-CTGGCGATCC 133078 |||| || |||||| || || || | || |||||| || ||| | || | ||||| Sbjct 43564 TTCGATGGACGCGAAGGCGACTAGTCTTTCACCGAACAGCGCGTCTGCGTCTTG-GATCC 43622 Query 133079 AGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACA 133138 | | || |||||||||||||| || | || || || ||||||||||| |||| Sbjct 43623 ATCTAAGGGCCCATTCGGCCTTCTCGCAAATTTCTGGGATGGTGTCGATGGCGTTGAACA 43682 Query 133139 AACGGAGTTTCTCTTCCGAGGAAC--GCACGTAGGTGTCGATGAGGGTCGAATACATTTC 133196 | | | | || | | ||| | | |||||| ||||| | || || |||| Sbjct 43683 A--GAATTCACTTTCCTTTGGATCCTTGATGTAGGTATCGATCAACAAGGAGTAGGTTTC 43740 Query 133197 CGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTG 133256 || || | ||| || || |||||||| || ||||| || | | || || | ||| Sbjct 43741 GGAATGAATGTTTTCGATAGCGATTTGGAAACCGTAGAAACTCTTGGCTTCCGGGATCTG 43800 Query 133257 CACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAA 133316 || || | |||| |||||||| ||||||||||| || |||||| ||||||||| Sbjct 43801 GACCTCGGTGGAGAAATTCTCGACCAAGTTTTCGTTGACAATACCGTCGGAGGCGGCGAA 43860 Query 133317 AAAGGCCAGCACGTGCTT--GATGAAATGGCGCTCGTTGTCGTTCA---AGCGCTCCCAG 133371 ||||| || || ||| |||||| | ||||| ||||||| | | |||| Sbjct 43861 GAAGGCAAGGAC--TCTTGAGATGAAGAACCTTTCGTTTTCGTTCATTCTGTTGTTCCAG 43918 Query 133372 TCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGC 133427 || | | |||||||||| || | |||||| | ||||| || || |||||||| Sbjct 43919 TCATGGATATCCTTGGACAAATCGATTTCCTCGGCAGTCCAGAAAGAGGCCTCGGC 43974 >seq166 Length=41989 Score = 113 bits (124), Expect = 5e-20 Identities = 522/816 (64%), Gaps = 23/816 (3%) Strand=Plus/Plus Query 132625 TTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTT- 132683 || || || || ||||| || || ||||||| ||| ||| ||||| |||||||| Sbjct 6635 TTTTCGAAGAAGTTAGTCTTACCGGCCAAGGAGATGTTTTCCATGAAATCGAAGGGGTTT 6694 Query 132684 --GGCTGTGTTGTAGTGCTTGGTGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAAC 132741 | | ||| ||| | |||| | |||| || | || | ||| |||||||| |||||| Sbjct 6695 TCGACCTTGTAGTATTTCTTGTTACCGAA-AG--CAACCAACAGTCTGTCGGCGACGAAC 6751 Query 132742 TCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCAGACGCACCGGCAGCGCTTCG 132801 || | |||||| ||| || || | || |||| | || || | || || Sbjct 6752 TCAACGTATTGGTTCATTAAGTCAGCGTTCATACCTAGCAAAGCAACTGGTAAGGCGTCC 6811 Query 132802 GTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCG 132861 || | | ||| || || | || || |||||||| |||| ||| || | | Sbjct 6812 AAGAAGTATCTTTGTTCAATTTCCACAGCCTCGGTGACAATTTTTTCAACAATGGCTGGG 6871 Query 132862 -CTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTC 132920 || | ||| | |||||| ||||| |||||| ||||||||| ||||| || || Sbjct 6872 TCTGGTTTGTT-CTTCAAATGGGCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTC 6930 Query 132921 GTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAG 132980 ||| || | || | ||||||| || || || |||||||| | || | ||||| | Sbjct 6931 GTCTCTACAGATCAATTCGTTGGAAAAGGTTAAACCGGGCATCATACCTCTCTTTTTCAA 6990 Query 132981 CCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCAC 133040 ||| || |||| ||| || || || || ||||| || || | || || || || || Sbjct 6991 CCAGAAAATGGAGGCAAAGGAACCGGAGAAAAAGACACCTTCAATGGAGGCAAAGGCAAC 7050 Query 133041 CAGGCGCTCGCCGAACGTGGCTTCTTTG-CTGGCGATCCAGCGCAGCGCCCATTCGGCCT 133099 || | || || ||| ||| || | || | ||||| | | ||||||||||||| Sbjct 7051 TAGTCTTTCACCAAACAAGGCGTCAGCGTCTTGA-ATCCATCTTAAAGCCCATTCGGCCT 7109 Query 133100 TTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACGGAGTT---TCTCTTCCG 133156 | || || || || || | ||||| || ||||| || || | |||| | Sbjct 7110 TCTCACCGATTTCTGGGATGGTGTGAATGGCATTGAACAA---GAATTCACTTTCTTTAG 7166 Query 133157 AGGAACGCACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGG 133216 | | |||||| ||||| | || || |||| ||||| | || || || Sbjct 7167 GGTCCTTGATGTAGGTATCGATCAACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCA 7226 Query 133217 CGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCT 133276 |||||| || ||||| || | | ||||| | || ||||| | ||| | Sbjct 7227 TGATTTGGAAACCGTAGAAACTCTTTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTT 7286 Query 133277 CGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTG- 133335 | |||| ||||| || || || ||||| |||||||||||||| || || || | Sbjct 7287 CAACCAAGTTTTCATTAACAATACCGTCAGAAGCGGCGAAAAAGGCAAGAAC--TCTGGA 7344 Query 133336 -ATGAAATGGCGCTCGTTGTCGTTCA---AGCGCTCCCAGTCGCGCGTGTCCTTGGACAG 133391 |||||| | |||||| ||||||| | | |||||| | | ||||| |||| Sbjct 7345 AATGAAAAATCTCTCGTTCTCGTTCATTCTGTTGTTCCAGTCATGGATATCCTTAGACAA 7404 Query 133392 GTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGC 133427 || | || || ||||||| || || || ||||| Sbjct 7405 ATCAATTTCTTCAGCGGTCCAGAAAGAAGCTTCGGC 7440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500165935128320