Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001640265.1_202016-
05-08] 1,098 sequences; 22,339,351 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq34 149 7e-31
seq13 111 2e-19
>seq34
Length=134357
Score = 149 bits (164), Expect = 7e-31
Identities = 338/504 (67%), Gaps = 12/504 (2%)
Strand=Plus/Minus
Query 159277 ATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGAGTATGCA 159336
|| ||||| || ||| ||| || |||||||| || |||| | || ||||| ||| |
Sbjct 129220 ATTACAGGTTTCGATGGTATTTCTTTACAACCAAATTCAGGTGCTCAAGGTGAATATACT 129161
Query 159337 GGACTGTTAGCAATCCAAGCATACCATCAAGGATCAGGAGATGATAAAAGAAATGTATGT 159396
|| ||| || |||| | | |||| || | ||| || || | | || || |||
Sbjct 129160 GGTCTGAGAGTAATCAGATCCTACCTGGAAAGCAAAGGTGAAAATCATCGTAACGTGTGT 129101
Query 159397 TTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGGCAGGGATGAAA 159456
|| || || | || || ||||| || ||||| || || || | ||||| || | |||
Sbjct 129100 TTAATCCCTGTATCCGCTCATGGTACAAATCCGGCTTCTGCCGCTATGGCGGGTTTAAAA 129041
Query 159457 GTTGTAGGTGTCAAGTGTGATGATGATGGCAACATAGACATCAAAGATCTAGAGAAGAAA 159516
||||| |||||| ||| | |||||| |||| | || || |||| ||
Sbjct 129040 GTTGTTCCTGTCAACTGTTTGCAGGATGGCTCATTAGATCTGGTTGACTTAAAGAATAAG 128981
Query 159517 GCAATCATGAATA-CATTT----GAACTGTCATGTATTATGATTACATATCCATCTACAC 159571
|| |||| | |||| ||||| | | ||||| || ||||| |||||
Sbjct 128980 GC-----TGAACAACATTCTAAAGAACTAGCCGCCGTAATGATCACCTATCCTTCTACTT 128926
Query 159572 ATGGTGTATTTGAAACAAACATCAGACA-GATATGTAAGATTGTTCATGAGAATGGTGGT 159630
| ||| |||||||| || |||| ||| | ||| | | || || ||| ||||||
Sbjct 128925 ACGGTTTATTTGAACCAGGCATCCAACATGCTAT-TGATATCGTACATTCTTTTGGTGGA 128867
Query 159631 CAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAACCATGTGAC 159690
|| || ||| | |||||||| ||| | ||||| ||||| || ||| | ||| | ||
Sbjct 128866 CAAGTCTATTTGGATGGTGCTAATATGAATGCGCAGGTTGGGCTAACTTCACCCGGAGAT 128807
Query 159691 TATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACATGGAGGT 159750
|||||||||||| || || | || |||||||||||||||| ||||| ||||| |||
Sbjct 128806 CTTGGTGCAGATGTTTGCCACTTGAATTTACATAAGACATTCTCCATTCCTCATGGTGGT 128747
Query 159751 GGAGGTCCTGGCGTAGGTCCTATT 159774
|| ||||| | | || ||| |||
Sbjct 128746 GGTGGTCCAGCTGGAGCTCCCATT 128723
>seq13
Length=201911
Score = 111 bits (122), Expect = 2e-19
Identities = 158/220 (72%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 158443 CAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCATGCTGCATTCTTTGCAACAACA 158502
|||||||| ||| |||| ||||| || || |||||||||||||| || || || |
Sbjct 28757 CAAAGGTTCGGTGTTCCAATGGGTTATGGTGGTCCTCATGCTGCCTTTTTCGCCGTTATT 28816
Query 158503 GACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGATAGCGAAGGT 158562
|| || || ||||| || |||||||||||||| ||| || || || ||||
Sbjct 28817 GATAAACTGAACAGAAAAATTCCTGGCAGAATTGTTGGTATCTCCAAGGACCGCCTAGGT 28876
Query 158563 AATAAAG-CATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAAGC 158621
||| | | ||| | ||||| |||| |||||||| ||||| || | | | || |||||
Sbjct 28877 AATCCTGCCCTAC-GTTTAGCTTTACAAACTAGAGAACAGCACATTAAACGTGATAAAGC 28935
Query 158622 AACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAAT 158661
||| ||||| ||||| || ||||| || ||||||||
Sbjct 28936 AACTTCAAACATTTGCACCGCTCAAGCCCTTTTGGCTAAT 28975
Score = 102 bits (112), Expect = 1e-16
Identities = 179/258 (69%), Gaps = 2/258 (1%)
Strand=Plus/Plus
Query 157880 TTATAGGTCAAGGATACTATGGAACCATCACACCCCCAGTCATACAGCGAAACGTTCTTG 157939
|||| ||| | |||||||| || || || || ||||| || || ||||| | | |
Sbjct 28173 TTATTGGTAAGGGATACTACGGCACGATTTTGCCGCCAGTTATTCAAAGAAACCTATTGG 28232
Query 157940 AGAATCCTAGT-TGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGA 157998
| || || || |||||||| ||||| ||||| || || |||| ||||||||||| |||
Sbjct 28233 A-AAGCCCAGAATGGTACACTTCTTATACTCCATACCAGCCTGAAATATCTCAGGGTAGA 28291
Query 157999 TTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCGATAGCA 158058
|||||||| ||| | || | |||||| | | | || | || || | || | |||
Sbjct 28292 TTGGAAGCATTACTAAACTTCCAAACAGTAGTTTCCGATTTGACTGGTTTGCCTGTGGCA 28351
Query 158059 AACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATGCTGTTAGCATATAAT 158118
||||| || | || ||||||| || || || | ||||| ||||| | ||| ||||
Sbjct 28352 AACGCCTCATTGTTGGATGAAGGTACCGCGGCTGGTGAAGCTATGCTACTGTCATTTAAT 28411
Query 158119 TCTACAAGAGATAAGAAG 158136
| | ||| | || |||
Sbjct 28412 ATTTCCAGAAAGAAAAAG 28429
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588043128997280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |