Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001640265.1_202016- 05-08] 1,098 sequences; 22,339,351 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq147 208 2e-48 seq61 185 2e-41 seq17 172 1e-37 seq99 158 3e-33 seq41 158 3e-33 seq72 145 2e-29 seq111 123 6e-23 >seq147 Length=47883 Score = 208 bits (230), Expect = 2e-48 Identities = 175/215 (81%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 194926 CTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCA 194985 ||||| |||||||||||||||||||| |||||||||||||| || | || ||||| ||| Sbjct 15593 CTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCA 15652 Query 194986 TCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTG 195045 ||||| || |||||||| || || || | || ||| |||||||||||||| ||||| ||| Sbjct 15653 TCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTG 15712 Query 195046 TCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACC 195105 ||||||||||| ||| ||||| ||||| ||||| ||| ||| || || ||||| | Sbjct 15713 TCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATA 15772 Query 195106 GTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| ||||| | |||||| ||||| | |||||| Sbjct 15773 GTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 15807 Score = 170 bits (188), Expect = 4e-37 Identities = 171/222 (77%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | |||||| || | || | || |||||||| ||||| || ||||| | || || Sbjct 15814 TCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGACAGCGT 15873 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| || ||||| || |||||||| || || || | || |||||| ||||||||||| || Sbjct 15874 TCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGAATACC 15933 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| |||||||||||||| |||||||| ||||| ||||| ||| ||| || || || Sbjct 15934 TTCCTTGTCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAG 15993 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| | ||||| ||||| | |||||| ||||| | |||||| Sbjct 15994 GGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 16035 Score = 167 bits (184), Expect = 5e-36 Identities = 170/222 (77%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | |||||| || | ||||||||| || || || ||||| |||||||| | || || Sbjct 16042 TCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTCTGAATGTTGTAATCAGACAGCGT 16101 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| || ||||| ||||||||||| || ||||| | || |||||| |||||||| || || Sbjct 16102 TCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACC 16161 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| |||||||||||||| ||| ||||| || ||||| || ||| ||| ||||| | Sbjct 16162 TTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAA 16221 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | || || || |||||||| || || || | ||||| Sbjct 16222 TGTTATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 16263 Score = 161 bits (178), Expect = 2e-34 Identities = 171/223 (77%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAG 194977 ||| | |||||| || | ||||||||| || || ||||| || ||||| || | |||| | Sbjct 16270 TCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAG-G 16328 Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037 |||| || ||||| | ||||||||| || ||||| | || |||||| |||||||| || | Sbjct 16329 TTCTACCGTCTTCTAACTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATAC 16388 Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAA 195097 |||| |||||||||||||| ||| ||||| || ||||| || ||| ||| ||||| | Sbjct 16389 CTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCA 16448 Query 195098 GGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | || || || |||||||| || ||||| | ||||| Sbjct 16449 ATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 16491 >seq61 Length=97283 Score = 185 bits (204), Expect = 2e-41 Identities = 174/222 (78%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||||||||| | ||| | ||||||||| ||||| || ||||| || | | ||| Sbjct 94341 TCTCAATCTCAAAACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGT 94400 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| || ||||| | |||||||| || ||||| | || ||||||||| || ||||| || Sbjct 94401 TCTGCCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACC 94460 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| ||||||||||| || |||||| || ||||| ||||| ||| ||| |||||||| Sbjct 94461 TTCCTTGTCTTGAATCTTAGACTTGACATTGTCAATAGTGTCTGAAGATTCAACTTCAAG 94520 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| ||||| || || ||||| || ||||| | |||||| Sbjct 94521 GGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 94562 >seq17 Length=175543 Score = 172 bits (190), Expect = 1e-37 Identities = 168/214 (79%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAG 194977 ||| | ||||||||| | || | |||||| || ||||| |||||||| || | |||| | Sbjct 134282 TCTCAATCTCAAAACTAAATGTAAAGTGGATTCCTTTTGGATATTGTAGTCAGACAAG-G 134340 Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037 |||| || ||||| | |||||||| || ||||| | || ||||||||| |||||||| | Sbjct 134341 TTCTACCGTCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGAGGAATAC 134400 Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAA 195097 |||| ||||||||||| ||| |||||| || ||||||||||| ||| ||| ||||| | Sbjct 134401 CTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCA 134460 Query 195098 GGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131 || | ||||| || ||||||||||| || || Sbjct 134461 AAGTGATGGTCTTACCAGTCAAAGTTTTGACAAA 134494 >seq99 Length=71790 Score = 158 bits (174), Expect = 3e-33 Identities = 165/214 (77%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAG 194977 ||| | |||||| || | || | |||||| || |||||||| ||||| |||| |||| | Sbjct 32466 TCTCAATCTCAAGACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGACAAG-G 32408 Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037 |||| || ||||| | |||||||| || ||||| | || ||||||||| || || || | Sbjct 32407 TTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATAC 32348 Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAA 195097 |||||||||||||||| || ||||| || ||||||||||| ||| ||| ||||| | Sbjct 32347 CTTCTTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCTA 32288 Query 195098 GGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131 | || | || || || |||||||| || ||||| Sbjct 32287 GAGTGATGGTTTTACCAGTCAAAGTCTTAACGAA 32254 >seq41 Length=123922 Score = 158 bits (174), Expect = 3e-33 Identities = 165/214 (77%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATC-GGCAAGAG 194977 ||| | |||||| || | ||| | |||||| ||||||||||| ||||| || | |||| | Sbjct 80812 TCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAG-G 80870 Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037 |||| || ||||| | |||||||| || ||||| | || ||||||||| || || || | Sbjct 80871 TTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATAC 80930 Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAA 195097 |||| ||||||||||| ||| |||||| || ||||| ||||| ||| ||| ||||| | Sbjct 80931 CTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCA 80990 Query 195098 GGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131 || | ||||| || |||||||| || || || Sbjct 80991 AAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 81024 >seq72 Length=88957 Score = 145 bits (160), Expect = 2e-29 Identities = 160/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | |||||| || | || | |||||| || ||||| || ||||| || | ||||| Sbjct 27048 TCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGT 26989 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| || ||||| | |||||||| || ||||| | || |||||| || || || || || Sbjct 26988 TCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGGATACC 26929 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| |||||||| || || |||||| || ||||||||||| ||| ||| ||||| | Sbjct 26928 TTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAA 26869 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131 || | ||||| || |||||||| || ||||| Sbjct 26868 AGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 26836 >seq111 Length=63476 Score = 123 bits (136), Expect = 6e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| ||||| | || | ||| ||||||||||| |||||||| || || || | | ||| Sbjct 63259 TCTTAGTCTTAGGACCAAGTGCAGAGTGGACTCCTTTTGAATGTTATAGTCCGACAAAGT 63318 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| || ||||| || |||||||| || || || | | |||||||| ||||||||||| Sbjct 63319 TCTGCCGTCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCCGGAGGAATGCC 63378 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||||| || || || || ||| || || || || ||||| || || || || | Sbjct 63379 CTCTTTATCCTGTATCTTACTCTTTACATTGTCGATCGTGTCGGAGGACTCGACCTCCAA 63438 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131 |||| ||||| || || ||||| || ||||| Sbjct 63439 AGTAATGGTCTTACCGGTTAAAGTCTTGACGAA 63471 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109465991674166