Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001640265.1_202016- 05-08] 1,098 sequences; 22,339,351 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq58 152 4e-32 seq99 145 6e-30 seq17 145 6e-30 seq61 143 2e-29 seq41 136 3e-27 seq147 131 1e-25 seq72 127 2e-24 seq111 125 6e-24 >seq58 Length=101919 Score = 152 bits (168), Expect = 4e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| || | || || || || || |||||||| ||||| || ||||| |||| Sbjct 8624 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 8565 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | |||||| |||| |||||||||||||| ||||| ||||| | ||||| || || ||| Sbjct 8564 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 8505 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| || ||||| || || || ||| | || | ||||||||| | ||| ||| Sbjct 8504 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 8445 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || || | || || ||||||||||| || || || || ||||| Sbjct 8444 TCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 8398 >seq99 Length=71790 Score = 145 bits (160), Expect = 6e-30 Identities = 163/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| || | || |||||||| | || ||||| ||||| || ||||| |||| Sbjct 32471 CCACCTCTCAATCTCAAGACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGAC 32412 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||||| | || |||||||||||||| ||||| ||||| | ||||| || || || Sbjct 32411 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 32352 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || |||||||| |||||||| || ||| ||| | || | |||||||| | ||| ||| Sbjct 32351 ATACCTTCTTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCAGAAGATTCAACT 32292 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAA 101460 || ||||||| ||||| || || ||||| || || || Sbjct 32291 TCTAGAGTGATGGTTTTACCAGTCAAAGTCTTAACGAA 32254 >seq17 Length=175543 Score = 145 bits (160), Expect = 6e-30 Identities = 163/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| || | ||||||||||| | || ||||| ||||| |||||||| || | Sbjct 134277 CCACCTCTCAATCTCAAAACTAAATGTAAAGTGGATTCCTTTTGGATATTGTAGTCAGAC 134336 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||||| | || |||||||||||||| ||||| || || | ||||| || || ||| Sbjct 134337 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGAGGA 134396 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| || |||||||| ||| || ||| | || | |||||||| | ||| ||| Sbjct 134397 ATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATGGTGTCAGAAGATTCAACT 134456 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAA 101460 || | ||||| || || || || |||||||| ||||| Sbjct 134457 TCCAAAGTGATGGTCTTACCAGTCAAAGTTTTGACAAA 134494 >seq61 Length=97283 Score = 143 bits (158), Expect = 2e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| || | ||||| || || | || || || ||||| || ||||| || | Sbjct 94336 CCACCTCTCAATCTCAAAACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 94395 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||||||| | || |||||||||||||| ||||| ||||| | ||||| || || ||| Sbjct 94396 AAAGTTCTGCCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 94455 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| || |||||||| || || ||| | || | |||||| || | ||| ||| Sbjct 94456 ATACCTTCCTTGTCTTGAATCTTAGACTTGACATTGTCAATAGTGTCTGAAGATTCAACT 94515 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| || | || || ||||||||||| || || || || ||||| Sbjct 94516 TCAAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 94562 >seq41 Length=123922 Score = 136 bits (150), Expect = 3e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| || | || ||||| || | || ||||||||||| || ||||| || | Sbjct 80807 CCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 80866 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||||| | || |||||||||||||| ||||| ||||| | ||||| || || || Sbjct 80867 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 80926 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| || |||||||| ||| || ||| | || | ||||||||| | ||| ||| Sbjct 80927 ATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 80986 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAA 101460 || | ||||| || || || || ||||| || ||||| Sbjct 80987 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 81024 >seq147 Length=47883 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| || | || || ||||| | ||||| ||||| || || || ||||| | Sbjct 15809 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 15868 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||||| | || |||| ||||||||| ||||| ||||| | |||||||| || ||| Sbjct 15869 AGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGA 15928 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| || ||||||||||| ||| || | || | |||||| || | ||| || Sbjct 15929 ATACCTTCCTTGTCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACC 15988 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || || | || || || |||| |||||| || || || ||||| Sbjct 15989 TCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 16035 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| || | || || || ||||| |||||||| || || || |||||||| | Sbjct 16037 CCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTCTGAATGTTGTAATCAGAC 16096 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||||| | || || | |||||||| ||||| ||||| | |||||||| || || Sbjct 16097 AGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGG 16156 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| || ||||||||||| || || | || | || || || | ||| ||| Sbjct 16157 ATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACT 16216 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || | || | ||||| ||||| ||||| || ||||| |||||||| Sbjct 16217 TCCAATGTTATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 16263 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| || | || || || ||||| |||||||| ||||| || ||||| || | Sbjct 16265 CCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 16324 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||||| | || || || |||||||| ||||| ||||| | |||||||| || || Sbjct 16325 AAGGTTCTACCGTCTTCTAACTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGG 16384 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| || ||||||||||| || || | || | || || || | ||| ||| Sbjct 16385 ATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACT 16444 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || | || | ||||| ||||| ||||| || || || |||||||| Sbjct 16445 TCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 16491 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 ||||| || || || ||||| |||||||| || | | ||||| |||| || | |||| Sbjct 15605 TGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTCTAGTTGC 15664 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 ||||| ||||| ||||| | || || || || ||||| ||||| || ||||||||||| Sbjct 15665 TTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTCTTGAATTTTC 15724 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || || | || | |||||| || | ||| || || || || | || || || ||| Sbjct 15725 GACTTAACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGTT 15784 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | |||||| || || || ||||| Sbjct 15785 AGAGTTTTGACGAAAATTTGCAT 15807 >seq72 Length=88957 Score = 127 bits (140), Expect = 2e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || |||||||| | || || ||||| | || ||||| ||||| || ||||| || | Sbjct 27053 CCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAT 26994 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | |||||| | || |||||||||||||| ||||| ||||| | |||||||| || || Sbjct 26993 AGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGG 26934 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| || ||||| || || || ||| | || | |||||||| | ||| ||| Sbjct 26933 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACT 26874 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAA 101460 || | ||||| || || || || ||||| || || || Sbjct 26873 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 26836 >seq111 Length=63476 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101239 ATTTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATC 101298 ||| || ||||||| | || || || || || || || || ||||| || || || || Sbjct 63250 ATTGCCACCTCTTAGTCTTAGGACCAAGTGCAGAGTGGACTCCTTTTGAATGTTATAGTC 63309 Query 101299 GGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGG 101358 | | ||||||| | || |||| ||||||||| ||||| ||||| | |||||| || || Sbjct 63310 CGACAAAGTTCTGCCGTCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCCGG 63369 Query 101359 CGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTC 101418 |||||||| |||||||| || || || |||||| | || | ||||| || | || Sbjct 63370 AGGAATGCCCTCTTTATCCTGTATCTTACTCTTTACATTGTCGATCGTGTCGGAGGACTC 63429 Query 101419 CACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCT 101465 || || | ||| | || || ||||||||||| || || || |||| Sbjct 63430 GACCTCCAAAGTAATGGTCTTACCGGTTAAAGTCTTGACGAAAATCT 63476 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396273097051986