Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001640265.1_202016- 05-08] 1,098 sequences; 22,339,351 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq155 136 7e-27 >seq155 Length=44513 Score = 136 bits (150), Expect = 7e-27 Identities = 293/436 (67%), Gaps = 4/436 (1%) Strand=Plus/Plus Query 48131 CAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGA 48190 ||||||||||| ||||||| |||||||| | || ||| | | ||||||||||| | Sbjct 43439 CAGGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAGATCAACTCGTTGGAGAAGGTCAAC 43498 Query 48191 CCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAG 48250 || ||||| | || |||| || | |||||| || | ||||| || || |||||||| Sbjct 43499 CCGGGCATCATACCTCTCTTCTTCAACCAGAAGATGGAGGCGAAGGACCCGGAGAAGAAA 43558 Query 48251 ATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAG 48310 | || || | | |||||| ||| || || || ||||| |||| |||| | Sbjct 43559 ACACCTTCGATGGACGCGAAGGCGACTAGTCTTTCACCGAACAGCGCGTCTGCGTCTTGG 43618 Query 48311 ATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGG 48370 ||||| ||| ||||| || ||||||| || ||| || || || ||||| | Sbjct 43619 ATCCATCTAAGGGCCCATTCGGCCTTCTCGCAAATTTCTGGGATGGTGTCGATGGCGTTG 43678 Query 48371 AAGAGCTTCTTGCACTCACC--TGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACA 48428 || | | |||| || || ||| | |||||| || || | | ||| Sbjct 43679 AACA--AGAATTCACTTTCCTTTGGATCCTTGATGTAGGTATCGATCAACAAGGAGTAGG 43736 Query 48429 TCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACA 48488 | || || || | || || |||||||| ||||| |||||||| | |||| || | Sbjct 43737 TTTCGGAATGAATGTTTTCGATAGCGATTTGGAAACCGTAGAAACTCTTGGCTTCCGGGA 43796 Query 48489 CCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAG 48548 ||| || || |||||||| |||| | || || || ||||| || || || || || | Sbjct 43797 TCTGGACCTCGGTGGAGAAATTCTCGACCAAGTTTTCGTTGACAATACCGTCGGAGGCGG 43856 Query 48549 CAAAGAAGGCAAGGAC 48564 | |||||||||||||| Sbjct 43857 CGAAGAAGGCAAGGAC 43872 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931520014712320