Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001640265.1_202016-
05-08] 1,098 sequences; 22,339,351 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq34 154 2e-32
seq13 129 7e-25
>seq34
Length=134357
Score = 154 bits (170), Expect = 2e-32
Identities = 339/504 (67%), Gaps = 12/504 (2%)
Strand=Plus/Plus
Query 138188 AATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGTAAATT 138247
||| ||| || | | ||||| ||||| ||||| ||||| |||||||||||||||||||
Sbjct 128723 AATGGGAGCTCCAGCTGGACCACCACCACCATGAGGAATGGAGAATGTCTTATGTAAATT 128782
Query 138248 TAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCATTTAG 138307
| || || |||||||||||| || | ||| | ||| || ||||| ||||| |
Sbjct 128783 CAAGTGGCAAACATCTGCACCAAGATCTCCGGGTGAAGTTAGCCCAACCTGCGCATTCAT 128842
Query 138308 ATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC-TGTC 138366
||| |||||||| | ||| || || |||||| ||| ||||| | | ||| | |||
Sbjct 128843 ATTAGCACCATCCAAATAGACTTGTCCACCAAAAGAATGTACGATATCA-ATAGCATGTT 128901
Query 138367 TGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATGAGAGTT 138426
|||| || |||||||| ||| | ||| || ||||| || ||||| | | ||||
Sbjct 128902 GGATGCCTGGTTCAAATAAACCGTAAGTAGAAGGATAGGTGATCATTACGGCGGCTAGTT 128961
Query 138427 C----AAATG-TATTCATGATTGCTTTCTTCTCTAGATCTTTGATGTCTATGTTGCCATC 138481
| |||| | |||| || || |||| || || | |||| ||||||
Sbjct 128962 CTTTAGAATGTTGTTCA-----GCCTTATTCTTTAAGTCAACCAGATCTAATGAGCCATC 129016
Query 138482 ATCATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGGATTAGT 138541
| ||| |||||| |||||||| | || ||||| | ||| ||| ||||| ||
Sbjct 129017 CTGCAAACAGTTGACAGGAACAACTTTTAAACCCGCCATAGCGGCAGAAGCCGGATTTGT 129076
Query 138542 TCCATGTGCTGACTCTGGTATCAGACATACATTTCTTTTATCATCTCCTGATCCTTGATG 138601
||||| || || | || || | ||| || || | | || || ||| | || |
Sbjct 129077 ACCATGAGCGGATACAGGGATTAAACACACGTTACGATGATTTTCACCTTTGCTTTCCAG 129136
Query 138602 ATATGCTTGGATTGCTAACAGTCCTGCATACTCACCCTGTGATCCTGCGTTAGGTTGTAA 138661
|| | | |||| || ||| || | ||| ||||| || | |||| || ||||||||
Sbjct 129137 GTAGGATCTGATTACTCTCAGACCAGTATATTCACCTTGAGCACCTGAATTTGGTTGTAA 129196
Query 138662 TGATATAGAATCAAAACCTGTGAT 138685
|| ||| ||| |||||||| ||
Sbjct 129197 AGAAATACCATCGAAACCTGTAAT 129220
>seq13
Length=201911
Score = 129 bits (142), Expect = 7e-25
Identities = 156/210 (74%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 139311 AGTGCTTGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTA 139370
|| ||||| || ||||| ||||| |||||||| || | | |||| ||||| ||||||
Sbjct 28965 AGGGCTTGAGCGGTGCAAATGTTTGAAGTTGCTTTATCACGTTTAATGTGCTGTTCTCTA 28906
Query 139371 GTTTGTAGTGCTAATCTGTATG-CAGGATTGCCTTCGCTGTCCACTGACTGACCTACAAT 139429
||||||| ||||| | ||| | ||||||| ||| || |||| || ||| |||||
Sbjct 28905 GTTTGTAAAGCTAAAC-GTAGGGCAGGATTACCTAGGCGGTCCTTGGAGATACCAACAAT 28847
Query 139430 TCTGCCAGGTATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACC 139489
||||||||| || ||||| || || || | || || || ||||||||||||||
Sbjct 28846 TCTGCCAGGAATTTTTCTGTTCAGTTTATCAATAACGGCGAAAAAGGCAGCATGAGGACC 28787
Query 139490 TCCGTATCCCATAGGAATACCAAACCTTTG 139519
|| || ||||| |||| ||| ||||||||
Sbjct 28786 ACCATAACCCATTGGAACACCGAACCTTTG 28757
Score = 107 bits (118), Expect = 2e-18
Identities = 180/258 (70%), Gaps = 2/258 (1%)
Strand=Plus/Minus
Query 139826 CTTCTTATCTCTTGTAGAATTATATGCTAACAGCATTGCCTCTGCTGCTGCAGTTGCTTC 139885
||| || | ||| | | |||| ||| | ||||| || || | || || || ||||
Sbjct 28429 CTTTTTCTTTCTGGAAATATTAAATGACAGTAGCATAGCTTCACCAGCCGCGGTACCTTC 28370
Query 139886 ATCTAATAGAGATGCGTTTGCTATTGGTAATCCTGTAAGTTCTGTGATGAGCGTTTGGTA 139945
||| || | || |||||||| | || || || || | || | | | |||||| |
Sbjct 28369 ATCCAACAATGAGGCGTTTGCCACAGGCAAACCAGTCAAATCGGAAACTACTGTTTGGAA 28310
Query 139946 ATTGAATAAAGCTTCCAATCTTCCCTGAGATATCTCAGCTTGATAGGGAGTGTAAGATGT 140005
|| | ||| ||||||||||| ||||||||||| |||| || || ||||| ||||| ||
Sbjct 28309 GTTTAGTAATGCTTCCAATCTACCCTGAGATATTTCAGGCTGGTATGGAGTATAAGAAGT 28250
Query 140006 GTACCA-ACTAGGATTCTCAAGAACGTTTCGCTGTATGACTGGGGGTGTAATGGTTCCAT 140064
|||||| || || || || | | ||||| || || ||||| || ||| || || |
Sbjct 28249 GTACCATTCTGGGCTT-TCCAATAGGTTTCTTTGAATAACTGGCGGCAAAATCGTGCCGT 28191
Query 140065 AGTATCCTTGACCTATAA 140082
||||||| | ||| ||||
Sbjct 28190 AGTATCCCTTACCAATAA 28173
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578990453246960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |