Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001640265.1_202016- 05-08] 1,098 sequences; 22,339,351 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq131 320 2e-82 seq26 239 5e-58 seq37 87.8 2e-12 >seq131 Length=54043 Score = 320 bits (354), Expect = 2e-82 Identities = 915/1389 (66%), Gaps = 42/1389 (3%) Strand=Plus/Plus Query 75227 ATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGACATACGAC 75286 ||| | |||||| | ||||||||||| ||| || || ||| || || || || || Sbjct 47784 ATGAGAGTCGCACTAGGCATCCACGGTAGAGATATCGAGGCTGCTTTAGAAACGTATAAC 47843 Query 75287 AAGATGTCCC-AAGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACC 75345 |||||| | || ||| || | |||||| | ||||| | |||||||| ||||| || Sbjct 47844 TTGATGTCTCTAAAATATTTT-ACTCACGCCTCTCCAACGTTGTTCAATGCCGGTACTCC 47902 Query 75346 AAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTAT 75405 || ||| || |||||| ||| ||| | | |||| ||||||||||| ||| | || || Sbjct 47903 AAAACCTCAAATGTCCTCTTGTTTCTTGGTTGCCATGAAGGAGGACTCTATCGAGGGGAT 47962 Query 75406 CTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCA 75465 || | || | | ||| ||||| || || || ||||| |||||||| | || Sbjct 47963 TTACGACACCTTGAAGGAATGTGCTTTGATTTCCAAAACTGCTGGTGGTATTGGTCTACA 48022 Query 75466 CATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGG 75525 |||||| | | | | | | ||| ||| || ||||| ||| || | || Sbjct 48023 TATCCATAACATTCGTTCAACTGGTTCTTACATTGCTGGTACAAACGGTACTTCTAACGG 48082 Query 75526 TATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCGGGGCG 75585 | | ||||| ||| |||| || || || ||| || || ||||| | || | || Sbjct 48083 TTTAATTCCTATGATTCGTGTTTTCAATAACACTGCCCGTTATGTTGACCAGGGTGGTAA 48142 Query 75586 TCGCAAGG---GGTCCATC-GCGGTCTACTTGGAACCATGGCATGCCGATATCATGGAGT 75641 | ||| ||| | | || | ||| |||||||||||||||| ||||| | || | Sbjct 48143 TAA-AAGACCTGGTGCGTTTGCCCTTTACCTGGAACCATGGCATGCTGATATATTTGATT 48201 Query 75642 TCCTTGAG-TTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTAGAGATCTCTTTTCA 75700 | |||| ||| || ||||| ||| | || || ||| |||||| | || | Sbjct 48202 TTATTGATATTAGGAAG-AACCACGGTAAAGAGGAAATTCGTGCAAGAGATTTGTTCCCT 48260 Query 75701 TCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCTCTT 75760 | || |||||||| || |||||||||||||| || || || ||| ||| | | Sbjct 48261 GCTCTATGGATTCCTGATCTTTTCATGAAGCGTGTCGAAGAAAATGGGACCTGGACATTA 48320 Query 75761 TTCTGTCCAGACAAG-GCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGAAGCCCT 75819 |||| |||| ||| || || ||| | ||| ||||| |||||||| || || Sbjct 48321 TTCTCTCCA-ACATCAGCTCCTGGTTTAAGCGATTGTTACGGTGACGAGTTTGAGGCTCT 48379 Query 75820 CTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCAGCCGCCGATGTTTG 75879 || || || || | || ||| | | || |||| | |||| | | || Sbjct 48380 ATATACCCGCTACGAGAAAGAAGGTCGTGGTAA---GACTATCAAAGCCCAAAAATTATG 48436 Query 75880 GAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGC 75939 | | | ||| | || | || || || ||||| ||||| | | ||||||||||||| Sbjct 48437 GTATTCCATTTTGGAAGCTCAAACTGAAACTGGTACACCTTTCGTTGTTTACAAGGATGC 48496 Query 75940 TTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCAC 75999 |||||||| || ||| ||||| || || || |||||| ||||| | ||| Sbjct 48497 TTGTAACAGAAAATCTAATCAAAAAAACTTAGGTGTCATCAAGTCATCAAACTTATGCTG 48556 Query 76000 GGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGC 76059 |||||| | || ||| ||| | ||||| || |||||||| || ||||| || | || Sbjct 48557 TGAAATTGTTGAATACTCAGCTCCAGATGAAACTGCTGTTTGTAACTTGGCTTCCGTTGC 48616 Query 76060 CCTTCCAAAGTATGTCAATGAAG---------------AGACTCGCACTTTTGATTATGA 76104 | | ||| | || ||| |||| ||||| ||| | | | | Sbjct 48617 CTTACCA--GCAT-TCATTGAAACTTCTGAGGATGGTAAGACTTCCACATACAACTTCAA 48673 Query 76105 AAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAA 76164 |||| | |||||||| | || ||||||| ||| ||||| |||||||||| | || Sbjct 48674 AAAATTACATGAAATTGCTAAAGTTGTTACTCGTAATTTAAACAGAGTCATTGATCGTAA 48733 Query 76165 TTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGG 76224 || || || ||||| ||| |||| || |||||| |||| ||||| |||| |||||| Sbjct 48734 TTACTACCCTGTTGAAGAAGCGAGAAAATCCAATATGAGACATAGACCAATTGCTTTGGG 48793 Query 76225 TGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGATGAAGC 76284 ||||||||||||||| || || || ||| || | |||||||||| || ||||| Sbjct 48794 TGTTCAAGGTCTCGCTGACACTTTCATGCTGTTACGTTTGCCATTTGATTCTGAGGAAGC 48853 Query 76285 CAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTG 76344 | | | ||| | ||||||||||| || ||||| || ||| |||| || ||| Sbjct 48854 CCGTTTGCTAAATATCCAAATCTTTGAAACTATTTATCATGCCTCCATGGAAGCTTCTTG 48913 Query 76345 TGAATTGGCT--GAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAA 76402 |||| | ||| |||| | ||| | || || || || | || ||||| || || ||| Sbjct 48914 TGAACTAGCTCAGAAG--GACGGTCCATACGAAACTTTCCAAGGATCTCCTGCTTCTCAA 48971 Query 76403 GGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAACTACGACTGGGATGTT 76462 || | || ||||||||||||||||| || || | || | || ||||| Sbjct 48972 GGTATACTACAGTTTGATATGTGGGACCAAAAACCCTACGGCATGTGGGATTGGGA-CAC 49030 Query 76463 CTCAAGGAACG-CATCAAGGAGAAGGGTCTTCGTAACAGTCTTT--TGATGGCACCAATG 76519 || ||| || | |||| | || | ||| || | | | || || |||||||||||| Sbjct 49031 CTTAAGAAAAGATATCATGAAGCATGGTATTAG--AAATTCCTTGACCATGGCACCAATG 49088 Query 76520 CCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACA 76579 || || || ||||| | ||||| |||||| |||||||||| || |||||| ||| | Sbjct 49089 CCTACTGCATCCACATCCCAAATATTGGGTTATAATGAATGTTTCGAACCAGTCACTTCC 49148 Query 76580 AACATCTAC 76588 || || ||| Sbjct 49149 AATATGTAC 49157 >seq26 Length=155086 Score = 239 bits (264), Expect = 5e-58 Identities = 897/1385 (65%), Gaps = 40/1385 (3%) Strand=Plus/Minus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 |||||| || | ||||| | ||||| | || || ||||| ||| ||||||| | | Sbjct 133051 CCACAGCACTTAATCATGAGAGTCGCCCTAGGTATTCACGGTGAAAACATTGAGGCCGCT 132992 Query 75272 TTGGAGACATACGACAAGATGTCCC-AAGGTATGTTCATTCACGCAACACCAACCCTCTT 75330 || || || || || ||||| | || || || | ||| || | ||||| | || Sbjct 132991 TTAGAAACCTATAACTTAATGTCTCTAAAATACTTT-ACTCATGCCTCTCCAACTTTATT 132933 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 ||| |||||||| |||| || || |||||| || ||| | | || | ||||| || Sbjct 132932 CAACGCTGGTACTCCAAAGCCTCAAATGTCCTCCTGTTTCTTAGTTGCAATGAAGGATGA 132873 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 || || | ||||| || | ||| | | ||| ||||| || || || ||||| Sbjct 132872 TTCCATTGAAGGTATTTACGATACTTTGAAGGAATGTGCTTTGATTTCTAAAACTGCTGG 132813 Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 75510 |||||||| | || ||||| | | | || | ||| ||| || ||||| Sbjct 132812 AGGTATTGGTCTACATATCCACAACATTCGTGCAACCGGCTCTTACATTGCTGGTACAAA 132753 Query 75511 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 75570 || || | || | ||||| ||| | || || || ||| || || || ||||| Sbjct 132752 CGGGACTTCTAACGGGTTAATTCCTATGATCCGTGTCTTCAACAATACTGCCCGTTATGT 132693 Query 75571 AAATCAAGCGGGGCGTCGCAAGGG-----GT-CCATCGCGGTCTACTTGGAACCATGGCA 75624 | |||| || | |||| | || || | || | || ||||| |||||||| Sbjct 132692 TGACCAAGGTGG---TAACAAGAGACCTGGTGCCTTTGCTCTATATTTGGAGCCATGGCA 132636 Query 75625 TGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTG 75684 || |||||| | || ||| | || | || || || ||| | ||||| || ||| Sbjct 132635 CGCTGATATCTTCGACTTCATCGACATTAGAAAGAATCACGGTAAGGAAGAAA-TCCGTG 132577 Query 75685 T-AGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGG 75743 |||||| | || | | || ||| ||||||| |||||||||||||| || || || Sbjct 132576 CGAGAGATTTATTCCCTGCTCTATGGGTTCCAGATCTTTTCATGAAGCGTGTCGAAGAAA 132517 Query 75744 GTGGTCAATGGTCTCTTTTCTGTCCAGACAAG-GCACCAGGTCTCTCCGACGCGGTGGGT 75802 || ||| || | |||| ||| ||| || ||||| | ||| ||| Sbjct 132516 ACGGCACTTGGACTTTATTCTCTCCT-ACATCTGCCCCAGGCTTGAGTGACTGTTACGGT 132458 Query 75803 GAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTA 75862 || || || |||||||| || || || ||| | || ||| | | || |||| | Sbjct 132457 GATGAATTCGAAGCCCTATATACCCGTTACGAAAAAGAAGGTCGTGGTAA---GACTAT- 132402 Query 75863 CCAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATA 75921 | || | | | || ||| | |||| | || |||| ||||| ||||| ||||||| Sbjct 132401 CAAGGCCCAAAAATTATGGTACTCTATCTTGGAAGCACAAACGGAAACTGGTACACCATT 132342 Query 75922 TATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAA 75981 | | ||||||||||||||||||||| ||| ||||||||||| ||||| ||||| Sbjct 132341 TGTTGTTTACAAGGATGCTTGTAACAGGAAATCCAACCAAAAGAACTTGGGTGTTATCAA 132282 Query 75982 GAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTG 76041 | || ||| | ||| |||||| | || ||| | | | |||||||| |||||||| Sbjct 132281 GTCATCTAATTTGTGCTGTGAAATTGTTGAATACTCTGCTCCAGATGAGACTGCTGTTTG 132222 Query 76042 CAATTTGGCATCAATCGCCCTTCCA--AAGTATGTCAA----TGAAG------AGACTCG 76089 || ||||| || | || | ||| | ||| || ||||| | ||| Sbjct 132221 TAACTTGGCTTCTGTTGCTTTGCCAGCATTTATTGAAACATCTGAAGACGGCAAAACTTC 132162 Query 76090 CACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCG 76149 || | | | |||| || |||||||| | || || |||| || ||||| Sbjct 132161 TACATACAACTTCAAAAAGCTACATGAAATTTCTAAAGTTATTACTCGTAACTTAAACAA 132102 Query 76150 AGTCATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAG 76209 || |||||| | || | |||||| || ||| || ||| ||||||||| |||| || Sbjct 132101 CGTTATTGACCGTAACTATTATCCTGTCGAGGAAGCAAGAAGATCTAATATGAGACATAG 132042 Query 76210 ACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATT 76269 || |||| ||||||||| |||||| | || || || || |||| || | |||| Sbjct 132041 GCCGATTGCTTTGGGTGTCCAAGGTTTGGCTGACACTTTCATGTTGTTGCGTTTGCCATT 131982 Query 76270 TGATTCAGATGAAGCCAAGGAGA-TGAATGCTCGTATCTTTGAAACCATGTATCACGCAT 76328 || ||||| |||| || | | | ||| || ||||| ||||| || || || || | Sbjct 131981 CGACTCAGAAGAAG-CACGCTTACTAAATATTCAAATCTTCGAAACTATCTACCATGCCT 131923 Query 76329 CCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTT 76388 || |||| || ||||||||| ||| || | || | || || || ||| | || | Sbjct 131922 CCATGGAAGCTTCTTGTGAATTAGCTCAAAGAGATGGCCCATACGAAACCTTTAAAGGCT 131863 Query 76389 CTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCA-AGCTCAAC 76447 | || || || ||||| | ||||| || || ||||||| | |||||| | | Sbjct 131862 CCCCGGCTTCTCAAGGTATACTTCAATTCGACATGTGGG-ACCAAAAACCATACGGTATG 131804 Query 76448 TACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTT-- 76505 | || ||||| ||| | | ||||| |||| | ||| || | ||| ||||| Sbjct 131803 TGGGATTGGGACACTCTGAGAAATAACATCATGGAGCATGGTATTAGAAAC--TCTTTGA 131746 Query 76506 TGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTG 76565 |||||||| ||||| || || ||||| | || ||||| ||| | || || || || | Sbjct 131745 CCATGGCACCTATGCCTACTGCATCCACATCTCAGATCTTAGGTTACAACGAGTGTTTCG 131686 Query 76566 AACCA 76570 ||||| Sbjct 131685 AACCA 131681 >seq37 Length=128752 Score = 87.8 bits (96), Expect = 2e-12 Identities = 111/150 (74%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 175276 GGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTC 175335 || ||||| ||||||||||||||| |||| | || |||||||| || ||||||||| Sbjct 59113 GGCGCCAAAATCCCCCGAGGCGCCATTCTTTCCGGGCCTCCAGGTACCGGTAAGACCCTC 59172 Query 175336 CTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTC-ATCCAGTGCTCTGCCGCAAA 175394 | ||| |||| |||||| || | || || || ||| | | ||| |||| | | Sbjct 59173 TTGGCCAAGGCCACCGCGGGCGAGGCCAACGTGCCCTTCTTTTCCGTG-TCTGGTTCCGA 59231 Query 175395 CTTTGTGGAGATGTTTGTTGGTGTGGGTGC 175424 || ||||| ||||||||||| |||||||| Sbjct 59232 GTTCGTGGAAATGTTTGTTGGGGTGGGTGC 59261 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596561412082240