Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001640265.1_202016-
05-08] 1,098 sequences; 22,339,351 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq147 163 4e-35
seq155 154 2e-32
seq99 122 1e-22
seq111 120 4e-22
seq61 120 4e-22
seq58 120 4e-22
seq17 114 2e-20
seq72 111 2e-19
seq41 107 3e-18
>seq147
Length=47883
Score = 163 bits (180), Expect = 4e-35
Identities = 173/228 (76%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| || | ||||| | || || || ||||| || |||| || ||| |||
Sbjct 16035 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 15976
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | |||| ||||| |||| |||||| ||||| || ||||| || |||||||| |||
Sbjct 15975 GACACTATTGACAACGTCAAAAGTAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAA 15916
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||||||||||||| |||||||||||| || ||||| ||||| | || ||||||||
Sbjct 15915 CAAAGATTGATTTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAAC 15856
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| |||||| | ||| | ||||| ||||| ||||| ||||| |||
Sbjct 15855 ATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGGT 15808
Score = 150 bits (166), Expect = 3e-31
Identities = 170/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||| || ||| |||| || ||||| || ||||| || ||||| ||||| ||| |||
Sbjct 16263 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCC 16204
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| || ||||| || ||||| ||||| || ||||| || |||||||| |||
Sbjct 16203 GATACCATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATCCCTCCAGATCAA 16144
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||||||||||| | ||||||||||||||| ||||| ||||| | || ||||| ||
Sbjct 16143 CAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACGCTGTCTGATTACAAC 16084
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| || || | || ||||| || ||||| ||||| ||||| |||
Sbjct 16083 ATTCAGAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGGT 16036
Score = 141 bits (156), Expect = 1e-28
Identities = 180/245 (73%), Gaps = 6/245 (2%)
Strand=Plus/Minus
Query 155810 TTTATGTAATAAA--ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTA 155867
|||| ||||| | ||||| || || | || || ||||| || ||||| || |||||
Sbjct 16506 TTTAACTAATAGATTATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTG 16447
Query 155868 GAAGTCGAAGATTCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGC 155927
||||| ||| ||| |||| || ||||| || ||||| ||||| || |||||
Sbjct 16446 GAAGTTGAATCTTCCGATACCATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGT 16387
Query 155928 ATACCTCCAGAACAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACT 155987
|| |||||||| |||||||||||||| | ||||||||||||| | ||||| |||||
Sbjct 16386 ATCCCTCCAGATCAACAAAGATTGATCTTTGCCGGTAAGCAGTTAGAAGACGGTAGAACC 16327
Query 155988 TTATCAGATTATAATATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAG 156045
|| || || || | | ||||||| || | || ||||| || ||||| ||||| ||||
Sbjct 16326 TTGTCTGACTACA--ACATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAG 16269
Query 156046 GCGGT 156050
| |||
Sbjct 16268 GTGGT 16264
Score = 122 bits (134), Expect = 1e-22
Identities = 151/204 (74%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| || | ||||| | || || || ||||| || |||| || ||| |||
Sbjct 15807 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 15748
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | |||| ||||| || ||||| ||||| || ||||| || |||||||| ||
Sbjct 15747 GACACTATTGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAG 15688
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||||||||||||| |||||||||||| || |||||| ||||| | || || || |||
Sbjct 15687 CAAAGATTGATTTTTGCCGGTAAGCAACTAGAAGATGGTAGAACGCTGTCGGACTACAAT 15628
Query 156003 ATATCCAAA-GAGGCGACGCTTCA 156025
|| || ||| ||| | || |||||
Sbjct 15627 AT-TCAAAAGGAGTCCACTCTTCA 15605
>seq155
Length=44513
Score = 154 bits (170), Expect = 2e-32
Identities = 373/557 (67%), Gaps = 13/557 (2%)
Strand=Plus/Plus
Query 18152 AATAAACACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAAC 18211
|| ||||| ||||| || ||||| |||||||| |||||| | || || ||||| ||
Sbjct 43433 AACAAACAGGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAGATCAACTCGTTGGAGAAG 43492
Query 18212 GTTAACCCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTAGAA 18271
|| ||||||||||| |||||||| || || | ||| || || || ||||| | ||
Sbjct 43493 GTCAACCCGGGCATCATACCTCTCTTCTTCAACCAGAAGATGGAGGCGAAGGACCCGGAG 43552
Query 18272 AAGAATATACCCTCAACGCACGCGAACGCTATTAATCTTTCAGC-AAAACTGTATTTATT 18330
||||| | ||| || | | ||||||| || | || ||||||| | || | | | |
Sbjct 43553 AAGAAAACACCTTCGATGGACGCGAAGGCGACTAGTCTTTCACCGAACAGCGCGTCTGCG 43612
Query 18331 GCTCAGTATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCTAT 18390
|| | |||||| | | |||||||| | | || || || | || ||
Sbjct 43613 TCT-TGGATCCATCTAAGGGCCCATTCGGCCTTCTCGCAAATTTCTGGGATGGTGTCGAT 43671
Query 18391 AGCATTAAACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGA 18450
|| || ||||| || |||| || | ||| || || || || ||||| ||||| ||
Sbjct 43672 GGCGTTGAACAAGAATTCACTTTCCTTTGGATCCTTGATGTAGGTATCGATCAACAAGGA 43731
Query 18451 ATACATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATA-AAACGATCTAGCCT 18509
|| |||| ||||| ||| |||| ||||| || || |||| || |||| ||| | ||
Sbjct 43732 GTAGGTTTCGGAATGAATGTTTTCGATAGCGATTTGGAAACCGTAGAAAC--TCTTGGCT 43789
Query 18510 --CGGGATATTGAATCTCGCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTC 18567
|||||| || | |||| | | || | || ||||| || || || || ||||||||
Sbjct 43790 TCCGGGAT-CTGGACCTCGGTGGAGAAATTCTCGACCAAGTTTTCGTTGACAATACCGTC 43848
Query 18568 AGCAGATGCGAAAAATGCCAAAACATATTTA-ATGAAATGTTTTTCATTATCCTTGA--- 18623
| | ||||| || || | || | || | ||||| |||| || || || |
Sbjct 43849 GGAGGCGGCGAAGAAGGCAAGGAC-TCTTGAGATGAAGAACCTTTCGTTTTCGTTCATTC 43907
Query 18624 GATTGTTCCATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGATG 18683
|||||||| |||| ||||| || || | ||| | ||| || | ||||| ||||| |
Sbjct 43908 TGTTGTTCCAGTCATGGATATCCTTGGACAAATCGATTTCCTCGGCAGTCCAGAAAGAGG 43967
Query 18684 ATTCGGCCTGTTTGTAC 18700
||||| | ||||||
Sbjct 43968 CCTCGGCACGCTTGTAC 43984
>seq99
Length=71790
Score = 122 bits (134), Expect = 1e-22
Identities = 158/216 (73%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 155836 TTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATTTTAA 155895
|||| || |||||||| ||||| || || ||||||| ||| |||||| | ||| |
Sbjct 32258 TTAAGACTTTGACTGGTAAAACCATCACTCTAGAAGTTGAATCTTCTGACACCATTGACA 32317
Query 155896 ACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTGATTT 155955
| || ||| || || ||||| |||||||| || || || || |||||||||||||| |
Sbjct 32318 ATGTCAAATCCAAGATTCAAGACAAAGAAGGTATCCCACCTGACCAACAAAGATTGATCT 32377
Query 155956 ATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAA-GAG 156014
||| |||||||| | ||||| ||||| || || || || || || || ||| ||
Sbjct 32378 TTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGACTACAACAT-TCAAAAGGAA 32436
Query 156015 GCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
| || | |||||||| || ||||| ||||| |||
Sbjct 32437 TCCACTTTACATTTAGTCTTGAGATTGAGAGGTGGT 32472
>seq111
Length=63476
Score = 120 bits (132), Expect = 4e-22
Identities = 156/213 (73%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 155838 AAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATTTTAAAC 155897
|| || || || || || || ||||| || || ||||| || || | || ||
Sbjct 63465 AAGACTTTAACCGGTAAGACCATTACTTTGGAGGTCGAGTCCTCCGACACGATCGACAAT 63406
Query 155898 GTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTGATTTAT 155957
|| || | ||| ||||| |||||||| ||||| ||||| || ||||| || ||||||| |
Sbjct 63405 GTAAAGAGTAAGATACAGGATAAAGAGGGCATTCCTCCGGACCAACAGAGGTTGATTTTT 63346
Query 155958 GCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAA-GAGGC 156016
||||||||||| || ||||| ||||||||| || || ||||| || || ||| ||| |
Sbjct 63345 GCCGGTAAGCAACTGGAAGACGGCAGAACTTTGTCGGACTATAACAT-TCAAAAGGAGTC 63287
Query 156017 GACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049
|| || || || || ||||| ||||||| ||
Sbjct 63286 CACTCTGCACTTGGTCCTAAGACTAAGAGGTGG 63254
>seq61
Length=97283
Score = 120 bits (132), Expect = 4e-22
Identities = 168/234 (72%), Gaps = 4/234 (2%)
Strand=Plus/Minus
Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879
|| |||||||| || | || || || || || || |||||||| | ||||| ||| |
Sbjct 94565 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTTGAAGTTGAATCT 94506
Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939
|| || | |||| || || || ||| || ||||| || ||||| || || || ||
Sbjct 94505 TCAGACACTATTGACAATGTCAAGTCTAAGATTCAAGACAAGGAAGGTATTCCACCTGAC 94446
Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999
|||||||||||||| | ||| |||||||| | ||||| ||||||||| || || ||
Sbjct 94445 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGCAGAACTTTGTCTGACTAC 94386
Query 156000 AATATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTG 156051
| | ||||||| ||| | || | || || || || ||||| ||||| ||||
Sbjct 94385 A--ACATCCAAAAGGAGTCCACTTTACACTTGGTTTTGAGATTGAGAGGTGGTG 94334
>seq58
Length=101919
Score = 120 bits (132), Expect = 4e-22
Identities = 168/234 (72%), Gaps = 4/234 (2%)
Strand=Plus/Plus
Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879
|| |||||||| || | || || || || || || |||||||| | ||||| ||| |
Sbjct 8395 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCT 8454
Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939
||||| | |||| || || || || || ||||| || ||||| || || || ||
Sbjct 8455 TCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 8514
Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999
|||||||||||||| | ||| |||||||| | |||||| |||||||| || || ||
Sbjct 8515 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTAC 8574
Query 156000 AATATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTG 156051
| | ||||||| || | || || || || || || ||||| ||||| ||||
Sbjct 8575 A--ACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGGTG 8626
>seq17
Length=175543
Score = 114 bits (126), Expect = 2e-20
Identities = 159/221 (72%), Gaps = 4/221 (2%)
Strand=Plus/Minus
Query 155832 TTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATT 155891
||| | ||||| |||||||| || || || || || ||||| ||| |||||| | |||
Sbjct 134494 TTTGTCAAAACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATT 134435
Query 155892 TTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTG 155951
|| || || || || ||||| || ||||| || ||||| || |||||||||||
Sbjct 134434 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATTCCTCCTGACCAACAAAGATTA 134375
Query 155952 ATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAA 156011
|| | ||| |||||||| | ||||| ||||| || || || || | |||||||||
Sbjct 134374 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACA--ATATCCAAA 134317
Query 156012 --GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| | || | |||||||| || ||||| ||||| |||
Sbjct 134316 AGGAATCCACTTTACATTTAGTTTTGAGATTGAGAGGTGGT 134276
>seq72
Length=88957
Score = 111 bits (122), Expect = 2e-19
Identities = 156/217 (72%), Gaps = 4/217 (2%)
Strand=Plus/Plus
Query 155836 TTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATTTTAA 155895
|||| || |||||||| || || || || || ||||| ||| |||||| | ||| |
Sbjct 26840 TTAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATTGACA 26899
Query 155896 ACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTGATTT 155955
| || || || || ||||| || ||||| || || || || |||||||||||||| |
Sbjct 26900 ATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGATCAACAAAGATTGATCT 26959
Query 155956 ATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAA--GA 156013
||| |||||||| | ||||| |||||| |||| || || | | ||||||| ||
Sbjct 26960 TTGCTGGTAAGCAATTGGAAGACGGTAGAACTCTATCTGACTACA--ACATCCAAAAGGA 27017
Query 156014 GGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
| || | ||||| || || ||||||||||| |||
Sbjct 27018 ATCCACTTTACATTTGGTCTTGAGATTAAGAGGTGGT 27054
>seq41
Length=123922
Score = 107 bits (118), Expect = 3e-18
Identities = 155/219 (71%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 155832 TTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATT 155891
||| | || || |||||||| || || || || || ||||| ||| |||||| | ||||
Sbjct 81024 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 80965
Query 155892 TTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTG 155951
|| || || || || ||||| || ||||| || || || || ||||||||||||
Sbjct 80964 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 80905
Query 155952 ATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAA 156011
|| | ||| |||||||| | ||||| ||||| || || || || || || |||
Sbjct 80904 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAA 80845
Query 156012 GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| | || | || ||||| || ||||| ||||| |||
Sbjct 80844 GAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGGT 80806
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731861955056800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |