Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001640265.1_202016- 05-08] 1,098 sequences; 22,339,351 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq147 98.7 9e-16 >seq147 Length=47883 Score = 98.7 bits (108), Expect = 9e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964 ||| | ||| ||||| || | | || || ||||| ||||||||||| || ||| | Sbjct 16273 CAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCT 16332 Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024 ||||| | ||| ||||||| | |||| | | |||||||||||||| || ||||| Sbjct 16333 ACCGTCTTCTAACTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTC 16392 Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084 || || |||||| || | | || | ||||||| | || ||||| | || Sbjct 16393 CTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGT 16452 Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATGACTTATTAG 132133 | |||||||| |||| ||| || | |||||||||||| | |||||| Sbjct 16453 TATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCATAATCTATTAG 16501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476604658511280