Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001640265.1_202016-
05-08] 1,098 sequences; 22,339,351 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq147 111 1e-19
seq99 95.1 1e-14
seq41 89.7 5e-13
seq17 89.7 5e-13
seq58 84.2 2e-11
>seq147
Length=47883
Score = 111 bits (122), Expect = 1e-19
Identities = 163/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
||||| | ||||| || || || ||||| ||| | || || | ||||| ||| | |
Sbjct 16263 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCC 16204
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
||||| ||||| | || || |||||| || || || ||||| || || |||||
Sbjct 16203 GATACCATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATCCCTCCAGATCAA 16144
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACA 25352
|||||| | || | | ||| || || || ||||| | ||||| |||| | ||||||
Sbjct 16143 CAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACGCTGTCTG--ATTACA 16086
Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
| ||||| || ||||| || |||| || ||||| ||||||||||| ||
Sbjct 16085 ACATTCAGAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 16037
Score = 105 bits (116), Expect = 6e-18
Identities = 162/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
|||||| | || || ||||| |||| || || | || || | || || ||| | |
Sbjct 16035 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 15976
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|| ||||| || | || ||| |||||| || || || ||||| || || |||||
Sbjct 15975 GACACTATTGACAACGTCAAAAGTAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAA 15916
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACA 25352
|||||| | |||| | ||| || ||||| ||||| | ||||| |||| | |||| |
Sbjct 15915 CAAAGATTGATTTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTG--ATTATA 15858
Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
| ||||| ||||| || || | ||||| ||||| ||||||||||| ||
Sbjct 15857 ACATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGG 15809
Score = 102 bits (112), Expect = 7e-17
Identities = 169/242 (70%), Gaps = 4/242 (2%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
|||||| | || || ||||| |||| || || | || || | || || ||| | |
Sbjct 15807 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 15748
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|| ||||| || | || || |||||| || || || ||||| || || || |||
Sbjct 15747 GACACTATTGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAG 15688
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACA 25352
|||||| | |||| | ||| || ||||| ||||||| ||||| |||| | | ||||
Sbjct 15687 CAAAGATTGATTTTTGCCGGTAAGCAACTAGAAGATGGTAGAACGCTGTCGG--ACTACA 15630
Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAAAATGATCAT 25412
|||||||||| || ||||| |||| | || || || | ||| || || || ||||||
Sbjct 15629 ATATTCAAAAGGAGTCCACTCTTCACCTTGTCTTGAGGTCGAGGGGTGGTAACTGATCAG 15570
Query 25413 TC 25414
||
Sbjct 15569 TC 15568
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
||||| | || || || || || ||||| ||| | || || | ||||| ||| | |
Sbjct 16491 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCC 16432
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
||||| ||||| | || || |||||| || || || ||||| || || |||||
Sbjct 16431 GATACCATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATCCCTCCAGATCAA 16372
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACA 25352
|||||| | || | | ||| || || | ||||| | ||||| |||| | | ||||
Sbjct 16371 CAAAGATTGATCTTTGCCGGTAAGCAGTTAGAAGACGGTAGAACCTTGTCTG--ACTACA 16314
Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
| || ||||| ||||| || |||| || ||||| ||||||||||| ||
Sbjct 16313 ACATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 16265
>seq99
Length=71790
Score = 95.1 bits (104), Expect = 1e-14
Identities = 154/220 (70%), Gaps = 4/220 (2%)
Strand=Plus/Plus
Query 25184 TTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAACGATACTATC 25243
|| || || || || || || ||| | ||||| | ||||| ||| | || || ||
Sbjct 32254 TTCGTTAAGACTTTGACTGGTAAAACCATCACTCTAGAAGTTGAATCTTCTGACACCATT 32313
Query 25244 GAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAGCAAAGACTC 25303
|| | || ||| || ||| || ||||| ||||| || || || || |||||| |
Sbjct 32314 GACAATGTCAAATCCAAGATTCAAGACAAAGAAGGTATCCCACCTGACCAACAAAGATTG 32373
Query 25304 ATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACAATATTCAAA 25361
|| | | || || ||| | ||||| | ||||| |||| ||| ||||| |||||||
Sbjct 32374 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTC--CGACTACAACATTCAAA 32431
Query 25362 AAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
| |||||||| | |||||||| || ||||||||||| ||
Sbjct 32432 AGGAATCCACTTTACATTTAGTCTTGAGATTGAGAGGTGG 32471
>seq41
Length=123922
Score = 89.7 bits (98), Expect = 5e-13
Identities = 153/220 (70%), Gaps = 4/220 (2%)
Strand=Plus/Minus
Query 25184 TTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAACGATACTATC 25243
||||| || || || || || || | ||||| | ||||| ||| | || |||||
Sbjct 81024 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 80965
Query 25244 GAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAGCAAAGACTC 25303
|| | || || ||| ||| || || || ||||| || || || || |||||| |
Sbjct 80964 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 80905
Query 25304 ATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACAATATTCAAA 25361
|| | | || || ||| | ||||| | ||||| |||| | | ||||| |||||||
Sbjct 80904 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTG--ACTACAACATTCAAA 80847
Query 25362 AAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
|||||||||| | || ||||| || ||||||||||| ||
Sbjct 80846 AAGAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGG 80807
>seq17
Length=175543
Score = 89.7 bits (98), Expect = 5e-13
Identities = 153/220 (70%), Gaps = 4/220 (2%)
Strand=Plus/Minus
Query 25184 TTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAACGATACTATC 25243
||||| ||||| || || || || | ||||| | ||||| ||| | || || ||
Sbjct 134494 TTTGTCAAAACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATT 134435
Query 25244 GAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAGCAAAGACTC 25303
|| | || || ||| ||| || || || ||||| || || || || |||||| |
Sbjct 134434 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATTCCTCCTGACCAACAAAGATTA 134375
Query 25304 ATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACAATATTCAAA 25361
|| | | || || ||| | ||||| | ||||| |||| | | |||||||| ||||
Sbjct 134374 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTG--ACTACAATATCCAAA 134317
Query 25362 AAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
| |||||||| | |||||||| || ||||||||||| ||
Sbjct 134316 AGGAATCCACTTTACATTTAGTTTTGAGATTGAGAGGTGG 134277
>seq58
Length=101919
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 25171 CAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGC 25230
||| |||||| | || || || || |||||||| || | || || | ||||| ||| |
Sbjct 8394 CAAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATC 8453
Query 25231 CAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGA 25290
|| ||||| || | || || || || || || || ||||| || || ||
Sbjct 8454 TTCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGA 8513
Query 25291 TCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTA 25350
|| |||||| | || | | || || ||| | ||||||| ||||| | | ||| ||
Sbjct 8514 CCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTA 8573
Query 25351 CAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
||| || ||||| ||||| || | || || || || ||||||||||| ||
Sbjct 8574 CAACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGG 8624
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445088291079360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |