Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001640265.1_202016-
05-08] 1,098 sequences; 22,339,351 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq180 145 6e-30
seq30 134 1e-26
seq77 96.9 3e-15
>seq180
Length=38731
Score = 145 bits (160), Expect = 6e-30
Identities = 376/567 (66%), Gaps = 16/567 (3%)
Strand=Plus/Minus
Query 19360 TATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGTAAATTACTTACA 19419
|| || || || ||| ||| |||||||||||||| ||| || | ||| | | || | |
Sbjct 35689 TACGGTCCTCCAGGTACTGGTAAAACATTAATTGCAAGAAAAATCGGTACAATGCTGA-A 35631
Query 19420 AAACAACCTCCCAAA-ATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATC 19478
||| ||||| ||||| || ||||||||| | |||| ||| ||||| ||| ||
Sbjct 35630 CGCCAAAGAGCCAAAGATTGTTAACGGTCCTGAAGTTTTAAGTAAGTATGTTGGTTCCTC 35571
Query 19479 GGAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCG 19538
|||||||| | || ||| || ||||| |||| |||| | || | |||| |
Sbjct 35570 AGAAGAAAACATCCGTAATTTATTCAAAGACGCAGAAGCAGAATACAAG-GCCAAGGGGG 35512
Query 19539 CAAAAG-TTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAG 19597
|| ||| || || || || || | |||||| |||| | | | ||||| ||||
Sbjct 35511 ATGAATCTTCCTTACATATCATCATTTTTGATGAACTGGATTCTGTTTTCAAGCAGAGAG 35452
Query 19598 GTTC------TGGTGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAAT 19651
|||| || || | ||| ||| ||||| ||| || |||||| | ||| | |||
Sbjct 35451 GTTCAAGAGGTGATGGTACTGGTGTAGGTGACAATGTAGTTAATCAATTGCTGGCTAAAA 35392
Query 19652 TAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAAT 19711
| ||||||||| | |||||||||||||| || || ||||| ||||| || | || |
Sbjct 35391 TGGACGGTGTTGATCAACTGAATAATATATTGGTCATTGGTATGACCAACCGTAAAGATT 35332
Query 19712 TAATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTAC 19771
| || || | || | ||||| || ||| | || ||| | || | |||||| | ||||
Sbjct 35331 TGATCGATATTGCTCTTTTACGTCCAGGTAGATTCGAAGTTCAGGTTGAAATTCATTTAC 35272
Query 19772 CCGATGAATGTGGACGTGTGGAAATTTTAAACATACATACATCAACCATGCGACAAAATA 19831
| || ||| || | || | ||||| | || || ||| || ||| || |||| |
Sbjct 35271 CGGACGAAAAAGGTAGACTGCAGATTTTTGAAATTCAGACAAAAAAAATGAGAGAAAACA 35212
Query 19832 ACCTTTTAAATGACGATGTAGATCTAGAAGAAATTGCAGCGGCT---ACCAAAAACTATA 19888
| | | | |||||||| | | | || | ||||||| || || || | |
Sbjct 35211 ATATGATGAGCGACGATGTTAACTTGGCTGAGTT---AGCGGCTTTAACTAACAATTTTT 35155
Query 19889 GCGGCGCAGAACTTGAGGGATTAGTGA 19915
||| || ||| |||| || |||||||
Sbjct 35154 CCGGTGCTGAAATTGAAGGTTTAGTGA 35128
>seq30
Length=148487
Score = 134 bits (148), Expect = 1e-26
Identities = 447/690 (65%), Gaps = 34/690 (5%)
Strand=Plus/Minus
Query 19246 GGAGGATTGAGTAAAGAGTTTTCTGAAATCTTTCGTAGAGCATTTGT--GTCGCGTGTTT 19303
|| || ||| |||||||||| || |||| || | ||||| |||| |||| | |||
Sbjct 72745 GGTGGTTTGGATAAAGAGTTTACTAAAATTTTCAGAAGAGCGTTTGCAAGTCGAATCTTT 72686
Query 19304 TTTC-TGCAGATGTCATTAAACAATTGGGATGTAAACATGTTCGTGGACTTTTGCTTT-- 19360
|| | ||| | || || || |||| | |||||| || |||||| |
Sbjct 72685 CCTCCTTCAGTT---ATAGAAAAACTGGGTATTTCTCATGTTAAAGG---TTTGCTATTG 72632
Query 19361 -ATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGTAAATTACTTA-- 19417
| || || || ||| ||| || || |||||||| ||| | || ||| | | || |
Sbjct 72631 TACGGTCCTCCAGGTACTGGTAAGACCTTAATTGCAAGAAAGATTGGTACAATGCTGAAT 72572
Query 19418 -CAAAACAACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAA 19476
| ||| | || |||||| || |||||||| ||||| || | || || || |||
Sbjct 72571 GCTAAAGAGCC---CAAAATCGTCAATGGTCCAGAAATTTTGAGCAAGTACGTTGGTTCT 72515
Query 19477 TCGGAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAA-----AACGTT 19531
|| |||||||| | || ||| ||| || || |||| |||| | | || | |
Sbjct 72514 TCAGAAGAAAACATTCGTAATTTATTTAAGGATGCAGAAGCAGAATATAGGGCCAAGGGT 72455
Query 19532 TAGGGCGCAAAAGTTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGC 19591
||| || ||| || || ||||| || | ||||| |||| | | | ||||
Sbjct 72454 GAGG-----AATCTTCCTTACATATTATTATTTTCGATGAGCTGGATTCTGTTTTCAAGC 72400
Query 19592 AAAGAGGTTC------TGGTGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGT 19645
| |||||||| || || | ||| ||| |||| ||| || |||||| | |
Sbjct 72399 AGAGAGGTTCAAGAGGTGATGGTACTGGTGTAGGGGACAATGTAGTTAATCAATTGTTAG 72340
Query 19646 CAAAATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGAC 19705
| ||| | || |||||| | || ||||||||||||| |||||||| ||||| ||| |
Sbjct 72339 CTAAAATGGATGGTGTTGATCAGTTGAATAATATTTTGGTTATTGGTATGACCAATCGTA 72280
Query 19706 TGGAATTAATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTA 19765
|| ||||||||||| || | || || || ||| | || ||| | | | ||||||
Sbjct 72279 AAGATTTAATAGACAGTGCTCTTTTGCGTCCAGGTAGATTTGAAGTCCAAGTTGAAATTC 72220
Query 19766 ACTTACCCGATGAATGTGGACGTGTGGAAATTTTAAACATACATACATCAACCATGCGAC 19825
| |||||||||||| ||| | | ||||||| |||| || || | ||| |
Sbjct 72219 ATTTACCCGATGAAAAAGGAAGACTCCAAATTTTCGACATTCAGACGAAGAAAATGAGGG 72160
Query 19826 AAAATAACCTTTTAAATGACGATGTAGATCTAGAAGAAATTGCAGCGGCTACCAAAAACT 19885
||||||| | | | |||||||| | ||| || | || || || |||||||
Sbjct 72159 AAAATAATATGATGAGCGACGATGTTAACTTAGCTGAGTTAGCTGCATTAACAAAAAACT 72100
Query 19886 ATAGCGGCGCAGAACTTGAGGGATTAGTGA 19915
|| || || ||||||| |||||||
Sbjct 72099 TCTCTGGTGCTGAGATTGAGGGTTTAGTGA 72070
>seq77
Length=84601
Score = 96.9 bits (106), Expect = 3e-15
Identities = 172/251 (69%), Gaps = 0/251 (0%)
Strand=Plus/Plus
Query 41103 CTGTCATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATA 41162
|| ||||| |||||| ||| | || |||| ||||| | || || || ||||||||
Sbjct 56212 CTTTCATGCTTATTGTACCAACGTTCTTGTGATATGGGGTTGGGAGTACCATTTAACATT 56271
Query 41163 GCGAGTTATGCTCTGCTCACGTATATGATTGCACACGTTACCAATTTAAAACCTGGTGAA 41222
|| |||||| || | || |||||||| | ||| | | | | || |||||
Sbjct 56272 GCATCATATGCTTTGTTGACTAGAATGATTGCTAAAGTTGTCGACATGGAGCCAGGTGAG 56331
Query 41223 TTTGTTCACACGTTAGGAGATGGACATATTTACATTAATCACATAGAGCCGTTAACAGAA 41282
|| |||| || || || |||| |||| |||| | | ||||| || | || | ||||
Sbjct 56332 TTCATTCATACTTTGGGGGATGCACATGTTTATAAAGACCACATTGATGCCTTGAAAGAA 56391
Query 41283 CAACTGACACGAAAACCTAGACCATTTCCAACGCTACTTATTAAACGCGCTGTTGAAAAC 41342
||| | || |||| || |||||||| || | ||| |||||| | | ||| || ||
Sbjct 56392 CAAATCACCAGAAATCCAAGACCATTCCCGAAACTAAAGATTAAAAGGGACGTTAAAGAC 56451
Query 41343 ATTGATGATTT 41353
|||||||||||
Sbjct 56452 ATTGATGATTT 56462
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397450681293490
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |