Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001640265.1_202016- 05-08] 1,098 sequences; 22,339,351 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq131 293 3e-74 seq26 208 1e-48 seq37 87.8 2e-12 >seq131 Length=54043 Score = 293 bits (324), Expect = 3e-74 Identities = 909/1389 (65%), Gaps = 42/1389 (3%) Strand=Plus/Minus Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766 ||| || || | ||| |||||| || |||||||||| |||||| ||||| | ||||| Sbjct 49157 GTACATATTGGAAGTGACTGGTTCGAAACATTCATTATAACCCAATATTTGGGATGTGGA 49098 Query 110767 GGCTGTTGGCATTGGTGCCATCA--AAAGACTGTTACGAAGACCCTTCTCCTTGATG-CG 110823 || || |||||||||||||| || || | | | || ||| | || | |||| | Sbjct 49097 TGCAGTAGGCATTGGTGCCATGGTCAAGGAATTT--CTAATACCATGCTTCATGATATCT 49040 Query 110824 TTCCTTGAGAACATCCCAGTCGTAGTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTG 110883 || ||| || ||||| || | || | || || |||||||| |||||||| Sbjct 49039 TTTCTTAAGGTG-TCCCAATCCCACATGCCGTAGGGTTTTTGGTCCCACATATCAAACTG 48981 Query 110884 AAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTC--A 110941 || | ||||| || || ||||| || | || ||||| || | ||| | |||| | Sbjct 48980 TAGTATACCTTGAGAAGCAGGAGATCCTTGGAAAGTTTCGTATGGACCGTC--CTTCTGA 48923 Query 110942 GCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTC 111001 || | |||||| || |||| ||| || ||||| || ||||||||||| | ||| Sbjct 48922 GCTAGTTCACAAGAAGCTTCCATGGAGGCATGATAAATAGTTTCAAAGATTTGGATATTT 48863 Query 111002 ATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGA 111061 | | |||||| || |||||||||| | || ||| || || || |||||| Sbjct 48862 AGCAAACGGGCTTCCTCAGAATCAAATGGCAAACGTAACAGCATGAAAGTGTCAGCGAGA 48803 Query 111062 CCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACG 111121 ||||||||||||||| |||| ||||| |||| |||||| || |||| ||| ||||| Sbjct 48802 CCTTGAACACCCAAAGCAATTGGTCTATGTCTCATATTGGATTTTCTCGCTTCTTCAACA 48743 Query 111122 GGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCA 111181 || || |||| | |||||||||| ||||| ||| ||||||| || | |||||| Sbjct 48742 GGGTAGTAATTACGATCAATGACTCTGTTTAAATTACGAGTAACAACTTTAGCAATTTCA 48683 Query 111182 TGAAGTTTTTCATAATCAAAAGTGCGAGTCT---------------CTTCATTGACATAC 111226 || | ||||| | | | ||| ||||| |||| ||| || | Sbjct 48682 TGTAATTTTTTGAAGTTGTATGTGGAAGTCTTACCATCCTCAGAAGTTTCAATGA-ATGC 48624 Query 111227 TTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCT 111286 ||| | ||| | || ||||| || |||||||| || ||||| | ||| ||| || Sbjct 48623 --TGGTAAGGCAACGGAAGCCAAGTTACAAACAGCAGTTTCATCTGGAGCTGAGTATTCA 48566 Query 111287 AAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTC 111346 | |||||| |||||||| || ||| || || || || ||||| ||| || Sbjct 48565 ACAATTTCACAGCATAAGTTTGATGACTTGATGACACCTAAGTTTTTTTGATTAGATTTT 48506 Query 111347 TTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGA 111406 |||| || ||||||||||| | | | | || || || || || || || | || | | Sbjct 48505 CTGTTACAAGCATCCTTGTAAACAACGAAAGGTGTACCAGTTTCAGTTTGAGCTTCCAAA 48446 Query 111407 ATAGCCTTCCAAACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTAC 111466 || | | ||| | || || | | || | || | || || || |||||| Sbjct 48445 ATGGAATACCATA-ATTTTTGG--GCTTTGATAGTCTTACCACGACCTTCTTTCTCGTAG 48389 Query 111467 TTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGC-CTTGTC 111525 || || || || |||||||| ||||| ||| | ||| || || ||| Sbjct 48388 CGGGTATATAGAGCCTCAAACTCGTCACCGTAACAATCGCTTAAACCAGGAGCTGATGT- 48330 Query 111526 TGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAAT 111585 |||| |||| | | ||| ||| ||| || || |||||||||||||| || ||||| Sbjct 48329 TGGAGAGAATAATGTCCAGGTCCCATTTTCTTCGACACGCTTCATGAAAAGATCAGGAAT 48270 Query 111586 CCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA 111645 ||| || | | || | |||||| ||| || || | ||| ||||| || ||| Sbjct 48269 CCATAGAGCAGGGAACAAATCTCTTGCACGAATTTCCTCTTTACCGTGGTT-CTTCCTAA 48211 Query 111646 -CTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC-- 111702 |||| || || | ||||| || |||||||| || || || | || | | || Sbjct 48210 TATCAATAAAATCAAATATATCAGCATGCCATGGTTCCAGGTAAAGGGCAAACGCACCAG 48151 Query 111703 --CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATT 111760 |||| | ||| | || | ||||| || || ||| || || || |||| ||| Sbjct 48150 GTCTTT-TATTACCACCCTGGTCAACATAACGGGCAGTGTTATTGAAAACACGAATCATA 48092 Query 111761 GGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACA 111820 ||||| | ||| | || ||| ||||| || ||| ||| | | | | | Sbjct 48091 GGAATTAAACCGTTAGAAGTACCGTTTGTACCAGCAATGTAAGAACCAGTTGAACGAATG 48032 Query 111821 TCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGA 111880 | |||||| || | |||||||| ||||| || || || ||||| ||| | | Sbjct 48031 TTATGGATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAG 47972 Query 111881 GTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATC 111940 || | || || || | ||| ||||||||||| |||| | | ||| ||| |||||| Sbjct 47971 GTGTCGTAAATCCCCTCGATAGAGTCCTCCTTCATGGCAACCAAGAAACAAGAGGACATT 47912 Query 111941 TGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT-G 111999 || ||| |||| ||||| |||||||| | ||||| | |||||| | || ||| || | Sbjct 47911 TGAGGTTTTGGAGTACCGGCATTGAACAACGTTGGAGAGGCGTGAGT-AAAATATTTTAG 47853 Query 112000 GGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGC 112059 |||||| || || || || || ||| || || ||| ||||||||||| | ||| Sbjct 47852 AGACATCAAGTTATACGTTTCTAAAGCAGCCTCGATATCTCTACCGTGGATGCCTAGTGC 47793 Query 112060 GACCCGCAT 112068 ||| | ||| Sbjct 47792 GACTCTCAT 47784 >seq26 Length=155086 Score = 208 bits (230), Expect = 1e-48 Identities = 890/1385 (64%), Gaps = 40/1385 (3%) Strand=Plus/Plus Query 110725 TGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGC 110784 |||||| || || || || | ||| ||||| || | ||||| || || ||||| ||||| Sbjct 131681 TGGTTCGAAACACTCGTTGTAACCTAAGATCTGAGATGTGGATGCAGTAGGCATAGGTGC 131740 Query 110785 CATCA--AAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAG 110842 ||| ||||| ||| | || ||| | |||| ||||| | | ||| ||||| Sbjct 131741 CATGGTCAAAGA--GTTTCTAATACCATGCTCCATGATGTTATTTCTCAGAGTGTCCCAA 131798 Query 110843 TCGTAGTTGAGCT-TGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGC 110901 || | | | |||||| | |||||||||| || ||||| | ||||| || || Sbjct 131799 TCCCACATACCGTATGGTTTTTGGT-CCCACATGTCGAATTGAAGTATACCTTGAGAAGC 131857 Query 110902 GGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTC 110961 || || || | ||||||||| || | || | || ||| |||||||| || || Sbjct 131858 CGGGGAGCCTTTAAAGGTTTCGTATGGGCCATCTCTTTGAGCTAATTCACAAGAAGCTTC 131917 Query 110962 CAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCA-TCTCCTTGGCTTCATCTG 111020 || ||| || || || || ||||| ||||| || ||| | | | | ||||| |||| Sbjct 131918 CATGGAGGCATGGTAGATAGTTTCGAAGATTTGAATATTTAGTAAGCGT-GCTTCTTCTG 131976 Query 111021 AATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAA 111080 | || |||| | || |||| || || || || | |||||| ||||||||| ||| Sbjct 131977 AGTCGAATGGCAAACGCAACAACATGAAAGTGTCAGCCAAACCTTGGACACCCAAAGCAA 132036 Query 111081 TAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAA 111140 | || || |||| ||||||||| ||| || ||| || |||||| | || | ||||| Sbjct 132037 TCGGCCTATGTCTCATATTAGATCTTCTTGCTTCCTCGACAGGATAATAGTTACGGTCAA 132096 Query 111141 TGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAG-TTTTTCA-----T 111194 | || ||||| || |||| || || | |||||||| || ||||| | | Sbjct 132097 TAACGTTGTTTAAGTTACGAGTAATAACTTTAGAAATTTCATGTAGCTTTTTGAAGTTGT 132156 Query 111195 AATCAAAAGTGCGAGTCTCTTCA----TTGACATACTT--TGGAAGGGCGATTGATGCCA 111248 | | |||| |||||| || ||| | ||| | || | || |||| Sbjct 132157 ATGTAGAAGTTTTGCCGTCTTCAGATGTTTCAATAAATGCTGGCAAAGCAACAGAAGCCA 132216 Query 111249 AATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGG 111308 | || |||||||| |||||||| | | | ||| || | |||||| || || || | Sbjct 132217 AGTTACAAACAGCAGTCTCATCTGGAGCAGAGTATTCAACAATTTCACAGCACAAATTAG 132276 Query 111309 AACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGA 111368 | ||| || ||||| ||||||||||| ||| |||| || ||||||||||| | Sbjct 132277 ATGACTTGATAACACCCAAGTTCTTTTGGTTGGATTTCCTGTTACAAGCATCCTTGTAAA 132336 Query 111369 GCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA-AACATCGGCG 111427 | | || || || || ||||| |||| || | |||| | ||| || | | | Sbjct 132337 CAACAAATGGTGTACCAGTTTCCGTTTGTGCTTCCAAGATAGAGTACCATAATTTTTGGG 132396 Query 111428 GCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAAC 111487 || | || | || | || || || ||||| || || |||||||| || Sbjct 132397 CCTTG----ATAGTCTTACCACGACCTTCTTTTTCGTAACGGGTATATAGGGCTTCGAAT 132452 Query 111488 TCCTCACCCACCGCGTCGGAGAGACCTGGTGC-CTTGTCTGGACAGAAAAGAGACCATTG 111546 || ||||| ||| | ||||| || ||| ||| |||| | || ||| Sbjct 132453 TCATCACCGTAACAGTCACTCAAGCCTGGGGCAGATGT-AGGAGAGAATAAAGTCCAAGT 132511 Query 111547 ACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATC 111606 || ||| || || |||||||||||||| ||||||| ||| || | | || | ||| Sbjct 132512 GCCGTTTTCTTCGACACGCTTCATGAAAAGATCTGGAACCCATAGAGCAGGGAATAAATC 132571 Query 111607 TCT-ACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATAT 111665 ||| ||| || ||||| | ||| || || || | || | ||| || | ||||| Sbjct 132572 TCTCGCACGGA-TTTCTTCCTTACCGTGATTCTTTCTAATGTCGATGAAGTCGAAGATAT 132630 Query 111666 CCGCGTGCCATGGCTC--AAGATAG----ACTGCGATAGATCCCTTTCGACGCCCAGCTT 111719 | |||||||||||||| || |||| | || || || ||| | ||| ||| Sbjct 132631 CAGCGTGCCATGGCTCCAAATATAGAGCAAAGGCACCAGGTCTCTTGTTA---CCACCTT 132687 Query 111720 GATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATT 111779 | | ||||| || || || ||| || || || | ||| ||||| | || | || Sbjct 132688 GGTCAACATAACGGGCAGTATTGTTGAAGACACGGATCATAGGAATTAACCCGTTAGAAG 132747 Query 111780 GACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAA 111839 || ||||| || ||| ||| | || | | | ||||| || | |||| Sbjct 132748 TCCCGTTTGTACCAGCAATGTAAGAGCCGGTTGCACGAATGTTGTGGATATGTAGACCAA 132807 Query 111840 TACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGA 111899 |||| ||||| || || || ||||| ||| | | ||| | || ||||| | | Sbjct 132808 TACCTCCAGCAGTTTTAGAAATCAAAGCACATTCCTTCAAAGTATCGTAAATACCTTCAA 132867 Query 111900 TTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAG 111959 | || || ||||| | || | | ||| || |||||| || || |||| ||||||| Sbjct 132868 TGGAATCATCCTTCATTGCAACTAAGAAACAGGAGGACATTTGAGGCTTTGGAGTACCAG 132927 Query 111960 CATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT-GGGACATCTTGTCGTATGTC 112018 | ||||| | ||||| | || ||| | || || || | ||||| || || || Sbjct 132928 CGTTGAATAAAGTTGGAGAGGCATGAGT-AAAGTATTTTAGAGACATTAAGTTATAGGTT 132986 Query 112019 TCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTAC 112078 || || | | ||||||| ||| ||||| || || | ||||| | ||||| | || | Sbjct 132987 TCTAAAGCGGCCTCAATGTTTTCACCGTGAATACCTAGGGCGACTCTCATGATTAAGTGC 133046 Query 112079 TGTGG 112083 ||||| Sbjct 133047 TGTGG 133051 >seq37 Length=128752 Score = 87.8 bits (96), Expect = 2e-12 Identities = 111/150 (74%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 11705 GCACCCACACCAACAAACATCTCCACAAAGTTTGCGGCAGAGCACTGGAT-GAATGGGAC 11763 |||||||| ||||||||||| ||||| || | | |||| ||| | | ||| || || Sbjct 59261 GCACCCACCCCAACAAACATTTCCACGAACTCGGAACCAGA-CACGGAAAAGAAGGGCAC 59203 Query 11764 ATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCGTACCTGGCTTACCCGC 11823 || | || |||||| |||| ||| | ||||||||| || |||||||| || | Sbjct 59202 GTTGGCCTCGCCCGCGGTGGCCTTGGCCAAGAGGGTCTTACCGGTACCTGGAGGCCCGGA 59143 Query 11824 GAGAAGGGCGCCTCGGGGGATCTTGGCACC 11853 |||| ||||||||||||||| ||||| || Sbjct 59142 AAGAATGGCGCCTCGGGGGATTTTGGCGCC 59113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628023380260800