Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001640265.1_202016-
05-08] 1,098 sequences; 22,339,351 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq49 123 3e-23
seq26 122 1e-22
seq155 109 6e-19
>seq49
Length=112061
Score = 123 bits (136), Expect = 3e-23
Identities = 337/511 (66%), Gaps = 10/511 (2%)
Strand=Plus/Minus
Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTG----AGACG 53248
||||||| || ||| | ||||| ||||| ||| || || ||||||| ||||
Sbjct 31226 TCATGCGTGTGGCCCTAGGTATTCACGGCAGCGA-TAT---CGAGTCCGTGCTGAAGACT 31171
Query 53249 TACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGT 53308
||| |||| ||| | ||||| || ||||| | || || || || || || |||
Sbjct 31170 TACAACTTGATGTCGTTGAGATACTTCACCCACGCTTCCCCCACACTATTTAATGCCGGT 31111
Query 53309 ACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGAC 53368
||| || ||||| ||||| || |||||| | || |||||||| ||||| || ||
Sbjct 31110 ACGCCACATCCTCAAATGTCTTCTTGTTTCCTGATTGCCATGAAGGACGACTCCATTGAA 31051
Query 53369 GGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGT 53428
|| || ||||| || | || ||||||||| || |||||| | |||||| | |||
Sbjct 31050 GGTATTTACGACACTTTGAAAGAGTGTGCCATGATTTCCAAGACTGCAGGTGGTGTTGGT 30991
Query 53429 ATCCACTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCC 53488
| || | || | ||| | | ||| | || || || ||||| |
Sbjct 30990 CTTCATATCAACAATATTCGTTCCACAGGCTCTTATATTGCAGGTACCAACGGTACTTCA 30931
Query 53489 GATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGT 53548
| || | | || ||| |||| |||||||||||||| || || ||||| |||| |||
Sbjct 30930 AACGGGTTGATTCCCATGATCCGTGTCTTCAACAACACTGCACGTTACGTGGACCAAGGT 30871
Query 53549 GGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATG 53608
||| ||| | || | || ||| | | | | ||||| ||||| || ||||| |
Sbjct 30870 GGTAACAAGAGACCCGGTGCCTTTGCCCTTTTCTTGGAGCCATGGCATGCAGACATCTTC 30811
Query 53609 GAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTT 53667
|| ||| |||| | | || ||| ||| | ||||| || || ||| | || ||||
Sbjct 30810 GACTTTGTCGATATCAGAAAGACTCATGGTAAGGAAGAAATTCG-TGCAAGAGATTTGTT 30752
Query 53668 TACAGCTCTGTGGATTCCGGACCTCTTCATG 53698
| ||||| |||||||| || || ||||||
Sbjct 30751 CCCTGCTCTATGGATTCCCGATCTTTTCATG 30721
>seq26
Length=155086
Score = 122 bits (134), Expect = 1e-22
Identities = 335/508 (66%), Gaps = 4/508 (1%)
Strand=Plus/Minus
Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGAC-TACACGCGTGTCCGTGAGACGTAC 53251
||||| | |||||| | ||||| |||||||| || | | || | || || ||
Sbjct 133038 TCATGAGAGTCGCCCTAGGTATTCACGGTGAAAACATTGAGGCCGCTTTA-GAAACCTAT 132980
Query 53252 GACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACG 53311
|||||||| | ||| |||||||| || ||| | ||||| | ||||||||||||||
Sbjct 132979 AACTTAATGTCTCTAAAATACTTTACTCATGCCTCTCCAACTTTATTCAACGCTGGTACT 132920
Query 53312 AATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGC 53371
| ||||| ||||| ||| ||| | || || ||||||||||| || || || ||
Sbjct 132919 CCAAAGCCTCAAATGTCCTCCTGTTTCTTAGTTGCAATGAAGGATGATTCCATTGAAGGT 132860
Query 53372 ATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATC 53431
|| ||||| || | ||||| ||||| || || || | || ||||| ||| |
Sbjct 132859 ATTTACGATACTTTGAAGGAATGTGCTTTGATTTCTAAAACTGCTGGAGGTATTGGTCTA 132800
Query 53432 CACTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGAT 53491
|| | ||| | ||||| | |||| | || || || ||||| | |
Sbjct 132799 CATATCCACAACATTCGTGCAACCGGCTCTTACATTGCTGGTACAAACGGGACTTCTAAC 132740
Query 53492 GGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGT 53551
|| | | |||||| |||| ||||||||||| || ||||| || || |||| ||||||
Sbjct 132739 GGGTTAATTCCTATGATCCGTGTCTTCAACAATACTGCCCGTTATGTTGACCAAGGTGGT 132680
Query 53552 GGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAG 53611
||| | || | || || | || | ||||| |||||||| || || | ||
Sbjct 132679 AACAAGAGACCTGGTGCCTTTGCTCTATATTTGGAGCCATGGCACGCTGATATCTTCGAC 132620
Query 53612 TTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTTTAC 53670
|| |||| | | |||||| ||| | ||||| || || ||| | || | || |
Sbjct 132619 TTCATCGACATTAGAAAGAATCACGGTAAGGAAGAAATCCG-TGCGAGAGATTTATTCCC 132561
Query 53671 AGCTCTGTGGATTCCGGACCTCTTCATG 53698
||||| ||| |||| || || ||||||
Sbjct 132560 TGCTCTATGGGTTCCAGATCTTTTCATG 132533
>seq155
Length=44513
Score = 109 bits (120), Expect = 6e-19
Identities = 346/530 (65%), Gaps = 20/530 (4%)
Strand=Plus/Plus
Query 74750 GGCAAACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCC 74809
|||||| || ||| | ||||| ||||||| ||||| || || || || | | ||
Sbjct 43441 GGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAGATCAACTCGTTGGAGAAGGTCAACCC 43500
Query 74810 AGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGAT 74869
||||| | || | |||||||||||| ||||||| |||||| || |||||| |
Sbjct 43501 GGGCATCATACCTCTCTTCTTCAACCAGAAGATGGAGGCGAAGGACCCGGAGAAGAAAAC 43560
Query 74870 GCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGTGCATCGGAAGTC----A 74925
||||||| |||| |||||||| || | || ||||| | || || | ||| |
Sbjct 43561 ACCTTCGATGGACGCGAAGGCGACTAGTCTTTCACCGAACAGCGCGTCTG-CGTCTTGGA 43619
Query 74926 TCCAAGTCTGAGCCCATTCAG-CTTTTCG----TTTGACCGCAGGGACAGTATCGATCGC 74980
|||| | | |||||||| | ||| ||| ||| | |||| || ||||| ||
Sbjct 43620 TCCATCTAAGGGCCCATTCGGCCTTCTCGCAAATTT-----CTGGGATGGTGTCGATGGC 43674
Query 74981 TTGGAAGAGGCTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTA 75040
| ||| | | | | | || | |||||||||| | | || |||| | |||||
Sbjct 43675 GTTGAACAAGAATTCACTTTCCTTTGGATCCTTGATGTAGGTATCGATCAACAAGGAGTA 43734
Query 75041 CGTCTCCGAATGAATCGACTCGTTGAACGA-CTGGTACGCGTAGAAAGACCGCGCCTCTG 75099
|| || |||||||| ||| | | ||| ||| | |||||||| | || || |
Sbjct 43735 GGTTTCGGAATGAATGTTTTCGAT-AGCGATTTGGAAACCGTAGAAACTCTTGGCTTCCG 43793
Query 75100 CAATCTGTACATCCTTTGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGG 75159
||||| || || | || |||||| | | | || || |||| || ||||| ||||
Sbjct 43794 GGATCTGGACCTCGGTGGAGAAATTCTCGACCAAGTTTTCGTTGACAATACCGTCGGAGG 43853
Query 75160 CGGCGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTCATCGTCAGTGAGT---TTGT 75216
||||||| || || || || || ||| ||| | || | || | | | ||||
Sbjct 43854 CGGCGAAGAAGGCAAGGACTCTTGAGATGAAGAACCTTTCGTTTTCGTTCATTCTGTTGT 43913
Query 75217 CCCAATCCTTCAGGTCCCCCGCCAAATCAATCTCCTCGACCGTCCAGAAA 75266
||| || | | ||| | |||||| || |||||| | |||||||||
Sbjct 43914 TCCAGTCATGGATATCCTTGGACAAATCGATTTCCTCGGCAGTCCAGAAA 43963
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547208489460400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |