Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001640265.1_202016- 05-08] 1,098 sequences; 22,339,351 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq72 172 1e-37 seq61 167 5e-36 seq58 163 6e-35 seq41 159 7e-34 seq99 158 3e-33 seq17 152 1e-31 seq147 147 5e-30 seq262 91.5 3e-13 seq219 84.2 5e-11 >seq72 Length=88957 Score = 172 bits (190), Expect = 1e-37 Identities = 158/200 (79%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 |||| |||||| ||| ||| ||||||||||||||||||| || || | || || || Sbjct 27035 ACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGTTCTACCGTCTTCC 26976 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 | ||| || || ||||||||||| | |||||| ||| || ||||| |||||||||||| Sbjct 26975 AATTGCTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGGATACCTTCCTTGTCTTGG 26916 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070 ||||| | || || | || || ||||| |||| ||| ||||| | |||||| |||||| Sbjct 26915 ATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTA 26856 Query 283071 CCCGTCAAAGTCTTAACGAA 283090 || ||||||||||||||||| Sbjct 26855 CCAGTCAAAGTCTTAACGAA 26836 >seq61 Length=97283 Score = 167 bits (184), Expect = 5e-36 Identities = 164/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 |||| ||||| ||| || ||||||||||||||||||| | || | ||| || || Sbjct 94354 ACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCGTCTTCC 94413 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 | ||| || || ||||||||||| | |||||||||| |||||||| ||||||||||| Sbjct 94414 AATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGA 94473 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070 ||||| | || || | || |||||||| |||| ||| ||||| || || || |||||| Sbjct 94474 ATCTTAGACTTGACATTGTCAATAGTGTCTGAAGATTCAACTTCAAGGGTAATAGTCTTA 94533 Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || || |||||||| ||||| || ||||| || Sbjct 94534 CCGGTTAAAGTCTTGACGAAAATTTGCATCTT 94565 >seq58 Length=101919 Score = 163 bits (180), Expect = 6e-35 Identities = 153/195 (78%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| ||||||||||||||||| | | || | ||||| || | ||| || || ||||| Sbjct 8589 TTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAA 8530 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 |||||| | |||||||||| |||||||| ||||||||||||||||| | || || | Sbjct 8529 GATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTGGACTTGACATT 8470 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || |||||||| |||| ||| ||||| || || || |||||||| || |||||||| || Sbjct 8469 GTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGAC 8410 Query 283088 GAATATCTGCATTTT 283102 ||| || ||||| || Sbjct 8409 GAAAATTTGCATCTT 8395 >seq41 Length=123922 Score = 159 bits (176), Expect = 7e-34 Identities = 154/195 (79%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 282897 TGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTG 282955 || || ||| ||||||||| ||||||||||||| |||| || | || || || | ||| Sbjct 80831 TGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAG-GTTCTACCGTCTTCCAATTG 80889 Query 282956 TTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTT 283015 || || ||||||||||| | |||||||||| || ||||| ||||||||||| ||||| Sbjct 80890 CTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGAATCTT 80949 Query 283016 TGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGT 283075 || || || | || |||||||| |||| ||| ||||| | |||||| |||||||| || Sbjct 80950 TGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCAGT 81009 Query 283076 CAAAGTCTTAACGAA 283090 ||||||||| || || Sbjct 81010 CAAAGTCTTGACAAA 81024 >seq99 Length=71790 Score = 158 bits (174), Expect = 3e-33 Identities = 154/196 (79%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 282896 ATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTT 282954 |||||| ||| ||| ||||| ||||||||||| | |||| || | || || || | || Sbjct 32448 ATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGACAAG-GTTCTACCGTCTTCCAATT 32390 Query 282955 GTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCT 283014 | || || ||||||||||| | |||||||||| || ||||| || |||||||| |||| Sbjct 32389 GCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCTTTGTCTTGAATCT 32330 Query 283015 TTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCG 283074 | | ||| || | || || ||||| |||| ||| ||||| |||||||| || ||||| | Sbjct 32329 TGGATTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCTAGAGTGATGGTTTTACCAG 32270 Query 283075 TCAAAGTCTTAACGAA 283090 |||||||||||||||| Sbjct 32269 TCAAAGTCTTAACGAA 32254 >seq17 Length=175543 Score = 152 bits (168), Expect = 1e-31 Identities = 153/196 (78%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 282896 ATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTT 282954 |||||| ||| ||| |||||||| |||||||||| |||| || | || || || | || Sbjct 134300 ATGTAAAGTGGATTCCTTTTGGATATTGTAGTCAGACAAG-GTTCTACCGTCTTCCAATT 134358 Query 282955 GTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCT 283014 | || || |||||||| || | |||||||||| |||||||| ||||||||||| |||| Sbjct 134359 GCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGAGGAATACCTTCCTTGTCTTGAATCT 134418 Query 283015 TTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCG 283074 ||| || || | || || ||||| |||| ||| ||||| | |||||| |||||||| | Sbjct 134419 TTGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCAG 134478 Query 283075 TCAAAGTCTTAACGAA 283090 ||||||| || || || Sbjct 134479 TCAAAGTTTTGACAAA 134494 >seq147 Length=47883 Score = 147 bits (162), Expect = 5e-30 Identities = 150/193 (78%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAA 282966 ||| ||||||||||||||||||| |||| || | || || |||| || || ||||||| Sbjct 16300 TTCCTTTTGGATGTTGTAGTCAGACAAG-GTTCTACCGTCTTCTAACTGCTTACCGGCAA 16358 Query 282967 AGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGG 283026 ||||||| | |||||| || || ||||| ||||||||||| || || | || ||| Sbjct 16359 AGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCTTGAATTTTCGACTTAACGT 16418 Query 283027 TATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAA 283086 | ||||| || || |||| ||| ||||| | || || || ||||| ||||||||||| | Sbjct 16419 TGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGA 16478 Query 283087 CGAATATCTGCAT 283099 |||| |||||||| Sbjct 16479 CGAAAATCTGCAT 16491 Score = 143 bits (158), Expect = 6e-29 Identities = 147/192 (77%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| || || |||||||| |||| ||||| | || || ||||| || || |||||||| Sbjct 16072 TTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAA 16131 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 |||||| | |||||| || || ||||| ||||||||||| || || | || ||| | Sbjct 16132 GATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCTTGAATTTTCGACTTAACGTT 16191 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 ||||| || || |||| ||| ||||| | || || || ||||| |||||||||||||| Sbjct 16192 GTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTAAC 16251 Query 283088 GAATATCTGCAT 283099 || |||||||| Sbjct 16252 AAAGATCTGCAT 16263 Score = 138 bits (152), Expect = 2e-27 Identities = 145/191 (76%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || ||||| || |||||||| | ||||| | ||||| |||||||| || |||||||| Sbjct 15617 TCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAA 15676 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 ||||| | ||| ||||| |||||||| ||||||||||| || || | || ||| | Sbjct 15677 ATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTG 15736 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 || |||||||| |||| ||| || || || || || ||||| || || | ||| || ||| Sbjct 15737 TCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACG 15796 Query 283089 AATATCTGCAT 283099 || || ||||| Sbjct 15797 AAAATTTGCAT 15807 Score = 138 bits (152), Expect = 2e-27 Identities = 158/210 (75%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 |||| ||| ||||| ||||| || ||||| || |||| ||||| | || || || Sbjct 15827 ACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTCTTCC 15886 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 ||||| || |||||||| ||||| | |||||| || |||||||| ||||||||||| Sbjct 15887 AGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGTCTTGA 15946 Query 283011 ATCTTTGCTTTT-ACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTT 283069 || ||| ||||| ||| | || |||||||| |||| ||| || || || || || ||||| Sbjct 15947 AT-TTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTT 16005 Query 283070 ACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || | ||| || ||||| || ||||| Sbjct 16006 CCCTGTTAGAGTTTTGACGAAAATTTGCAT 16035 >seq262 Length=22753 Score = 91.5 bits (100), Expect = 3e-13 Identities = 168/244 (69%), Gaps = 2/244 (1%) Strand=Plus/Minus Query 316947 AATGAAGTCAACGATAGACGTGTTAGATTCGGATCCGTCGAGGTCATGCTCAACATATGC 317006 || |||||| | || ||| |||| ||| | | || || | ||||||||||| || | Sbjct 10063 AACGAAGTCTAAGACAGAAGTGTCAGAGTGAGTACCATCAATATCATGCTCAACGTAGAC 10004 Query 317007 AGTTTTCAGAATATCCTT-CGTCGGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCA 317065 ||| | | | | | ||| || ||||| || || | ||||| || |||| || |||| Sbjct 10003 GGTTCT-ACATTCTTCTTGGGTTGGGAAACCATCAACTTGACCATTAGCAATAGCTCTCA 9945 Query 317066 TCAGTGTCGACTTGCCAGCACCATTGGGGCCGCAAAGACCATACCGATTTCCCTTCTTCA 317125 ||| || ||||| ||| ||| || || || || | |||||| | | | |||||| Sbjct 9944 TCAAAGTGGACTTACCACAACCGTTTGGACCACAGATACCATATCTTCTAGCTCTCTTCA 9885 Query 317126 GATTAAAACGGGTGTTGTTCAGAAGAATCTTACCACCATATGCCAGAGAGAACTCACAAT 317185 | || |||| ||||||| | |||||| |||| || |||| |||||| ||||| | Sbjct 9884 ATCTCAATTGGGTCTTGTTCAACAAGATCTTAGCACCGTAAGCCAAAGAGAATTCACAGT 9825 Query 317186 CACA 317189 ||| Sbjct 9824 TACA 9821 >seq219 Length=30728 Score = 84.2 bits (92), Expect = 5e-11 Identities = 117/164 (71%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 317026 GTCGGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCA 317085 || ||||| || || | ||||| || ||| || | ||| || || || || |||||| Sbjct 5461 GTGGGGAAGCCGTCAACTTGACCATTGGCAACCGAACGCATTAGAGTGGATTTCCCAGCA 5402 Query 317086 CCATTGGGGCCGCAAAGACCATACCGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTC 317145 ||||| || || || |||||||||| | ||| | |||| | | | || ||||| Sbjct 5401 CCATTAGGCCCACATAGACCATACCTTCTACCCCTTTTCAACCTTAGTTGAGTTTTGTTT 5342 Query 317146 AGAAGAATCTTACCACCATATGCCAGAGAGAACTCACAATCACA 317189 || | ||||| |||||||||||| ||| |||||||| | ||| Sbjct 5341 AGCAAGATCTTGGCACCATATGCCAAAGAAAACTCACAGTTACA 5298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046724474342092