Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F000732305.1_202014-07-21]
3,985 sequences; 11,595,011 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq131 100 2e-16
>seq131
Length=11630
Score = 100 bits (110), Expect = 2e-16
Identities = 321/498 (64%), Gaps = 29/498 (6%)
Strand=Plus/Minus
Query 101684 GCATCAATGTGATCTACATAGATGTGAGCATCTCCTATAGTATGGATAAACTCTCCAGGC 101743
|| |||| ||||| ||| | || ||||| || | |||||| || ||||| || ||
Sbjct 9335 GCTTCAACATGATCCTTATACACATGCGCATCCCCCAAAGTATGAATGAACTCACCCGGT 9276
Query 101744 ACTAGATTAGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAAT 101803
| | || ||| | ||||||||| | || || || | ||| ||||| ||||||
Sbjct 9275 TCCATATCGACGACTTTAGCAATCATTCTGGTCAACAGGGCATATGAGGCAATATTAAAT 9216
Query 101804 GGCACTCCTAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAG------CTT- 101856
||||| |||| |||||||||| || | || || | ||| ||||| |||
Sbjct 9215 GGCACACCTAGCCCCATATCACAGGAACGCTGGTATAACAAACATGAAAGGCGAGGCTTA 9156
Query 101857 -----TCCA------TC---------ACAGACATAAAATTGACTTAATACATGACAAGGC 101896
|||| || || ||||||||| || || | ||| || ||
Sbjct 9155 CCGCTTCCACTTTCCTCTTTGGGGAAACTGACATAAAACTGTGAAAAAATATGGCATGGT 9096
Query 101897 GGCAACACCATTTTAGGAATGTCTGAAACATTCCAAGCACACATTAACATCCTTCTATCT 101956
|| || |||| || || |||| | ||||||||||| ||| | |||||||||||
Sbjct 9095 GGTAAAGCCATCTTGTCAAAATCTGCAGGATTCCAAGCACTCATGATGATCCTTCTATCG 9036
Query 101957 GTAGGGTTTGTTTTTATAGTATCAATCAACTGTTTTAATTGGTCAACTCCTTCTCCTTTA 102016
|||||||||||||| | | || | ||| || | || || | |||| ||| ||
Sbjct 9035 TAAGGGTTTGTTTTTAATTTGTGTATAACCTGCTTCAGCTGATCGATGCCTTGTCCGGTA 8976
Query 102017 TAATC-GCGCCCAACACCTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACAC 102075
|| || | | || | || |||| || |||||||| ||||| || || ||||| ||
Sbjct 8975 TAGTCATCATCGCACGTC-TTGTATTGGGCACCGAAATGTCTCCATTGGAACCCATAAAC 8917
Query 102076 AGGTCCAAGATCTCCTTCATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGA 102135
|| || || |||||| | | ||| || | |||| ||||| || || | |||
Sbjct 8916 GGGGCCCAGGTCTCCTACTTTTCTATCCGTGAGCCCAATCTTATCCAAGTATTCACGAGA 8857
Query 102136 TCCATTCGCATCCCAAAT 102153
||||| | ||||| ||
Sbjct 8856 CCCATTACCGTCCCAGAT 8839
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361233655045235
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |