Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F000732305.1_202014-07-21]
3,985 sequences; 11,595,011 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq1567 188 8e-43
seq3120 122 1e-22
>seq1567
Length=2367
Score = 188 bits (208), Expect = 8e-43
Identities = 584/895 (65%), Gaps = 14/895 (2%)
Strand=Plus/Plus
Query 53783 TTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATG 53842
|||||||| || | || ||||| || ||||| ||||||| ||||||||||||| |||
Sbjct 1007 TTGATGGTACCCAGGTTCTGTTGGTTGGTCTTTCTGTTACAGGCATCCTTATAAACCATG 1066
Query 53843 AATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTT 53902
|| || ||||| ||||| | || | || | || || | ||| || |||||||
Sbjct 1067 AAGGGTGTACCGGTTTCTGTTTGTGCTTGCAAGATGGCGTACCATACCTTTTGAGCCTTG 1126
Query 53903 ATTATAGATTTGTATCTC--TTTTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGT 53960
|| | ||| || | | |||||||||||| | ||||| | ||| || || |
Sbjct 1127 AT----GGTTT-TACCACGACCTTCTCTTTCGTAACGGGTATATAGCTCTTCGAATTCTT 1181
Query 53961 CTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGT 54020
| |||||||| | |||||| || || || || | | || | ||| | || |
Sbjct 1182 CACCCCAAACGTCGTCCAAACCTGGGGCAGCACTTGGTGAGAATAAGGTCCAGGCCCCAT 1241
Query 54021 CATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGG 54080
| || | || || ||||| || ||||| |||||||| ||||| || | |||||| |
Sbjct 1242 CCTCTTCGACACGCTTCATGAAAAGATCGGGAATCCATAGAGCAGGGAACAAATCTCTTG 1301
Query 54081 TTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAAT 54140
| | ||| || || || | ||||| | | ||||| || | | || || | ||
Sbjct 1302 CACGAATTTCTTCCTTACCATGAGTCTTTCTGATATCGACAAAGTCGAAGATGTCTGCAT 1361
Query 54141 GCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGT 54200
|||| || |||||| | | || | | || || | ||||| || || || || | ||
Sbjct 1362 GCCATGGCTCCAAGAAAAGGGCAAAGGCACCGGGTCTCTTGTTACCACCTTGGTCCACGT 1421
Query 54201 ATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGG 54260
| | || ||||| || | || | | ||| ||||| | || || || | ||| ||||
Sbjct 1422 AACGTGCAGTGTTGTTGAAGACACGGATCATGGGAATCAACCCGTTTGAAGTACCGTTGG 1481
Query 54261 TCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAAT-TGATAGACCTATCCCCCCT 54319
| || | ||||| || ||| ||||||||| | || ||| ||||| | || |||
Sbjct 1482 TACCTGCAATATAAGAGCCTGTGGAACGAATATTGTTGATATGA-AGACCAACACCACCT 1540
Query 54320 GCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCA 54379
|| | || || || | || || ||| || || || || || || || || ||
Sbjct 1541 GCAGTCTTGGAAATCATGGCACACTCTTTCAAAGTGTCGTAAATACCTTCAATGGAGTCG 1600
Query 54380 TCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAAT 54439
||| ||||| || || ||||| ||||||||| || | || || |||||||||
Sbjct 1601 TCCTTCATGGCAATCAGGAAACAAGAAGACATTTGAGGATGTGGCGTACCGGCATTAAAT 1660
Query 54440 AAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCT 54499
| || || |||||||| || || || | || | | ||||| |||| | |
Sbjct 1661 AGTGTGGGGGAAGCGTGGGTGAAGTATCTCAACGACATCAAGTTGTAAGTCTTCAGCACG 1720
Query 54500 GAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTT 54559
|| || ||||| | ||||| |||| || |||||||| | || || || || | |
Sbjct 1721 GACTCGATATCGCTGCCGTGAATACCTAGGGCCACACGCATGACCAAATGTTGGGGACGT 1780
Query 54560 TCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAA 54619
|| | | | || || | | |||| ||| || ||||| ||| ||||| ||||||
Sbjct 1781 TCGGCCACTTCACCGTCTAGTCTTAGCAGGTA-GAACGTTCCAGAGTCTTAAACCCAAAA 1839
Query 54620 TAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTT 54672
||| |||| ||||| |||| ||||| | || | ||||| || |||| ||
Sbjct 1840 TAGGTGTACTTGAAA--TCTCTGTCGTACACGATGGCCGAGTTCAGCGTATCTTT 1892
>seq3120
Length=488
Score = 122 bits (134), Expect = 1e-22
Identities = 267/392 (68%), Gaps = 6/392 (2%)
Strand=Plus/Plus
Query 54284 GCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCAT 54343
|||||||| || ||| |||||| || || || || |||| || || || || |||
Sbjct 79 GCACGAATGTTGTGAATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACAT 138
Query 54344 CGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAG 54403
|| || || || ||||| || || || ||||||| |||| || ||| ||||||
Sbjct 139 TCCTTCAAAGTGTCGTAGATACCTTCAATGGAATCATCCTTCATTGCAACTAGGAAACAG 198
Query 54404 CTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAAC 54463
|||||||| | || || || || ||||| || ||||| ||||| |||||
Sbjct 199 GAGGACATTTGAGGCTTTGGTGTACCAGCGTTGAATAAAGTTGGAGAGGCGTGAGTAAAG 258
Query 54464 CATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCC-CATTGATGAAT 54522
||||| || | | || || || || | ||| | || || | || | |||||
Sbjct 259 TATTTTAGGGACATCAAGTTATAGGTTTCTAGAGCGGCCTCAATGTTATCACCG-TGAAT 317
Query 54523 TCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTT-GTTTATTT 54581
|||| ||||| | ||| | | ||| || || | |||| | | |||| ||| | |
Sbjct 318 ACCTAAGGCGACTCTCATGATTAAGTGTTGTGGACGTTCAGCAA-CTTGACCGTTGACTC 376
Query 54582 TCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-TGAAAAGTCTCGT 54640
||| ||||| || ||| |||||||||||||| || || |||| |||||| ||||
Sbjct 377 TCAATAAGTACGAACGTTCTAAAGTTTTAAAACCGAAGTAACTGTACTGAAAA-TCTCTG 435
Query 54641 TCGTAAATAATAACTGAGTTGAGTTTATCCTT 54672
|| || | |||| ||||||| |||||||||||
Sbjct 436 TCATAGACAATAGCTGAGTTTAGTTTATCCTT 467
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593692025242800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |