Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F000732305.1_202014-07-21] 3,985 sequences; 11,595,011 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq2084 96.9 3e-15 >seq2084 Length=1521 Score = 96.9 bits (106), Expect = 3e-15 Identities = 295/449 (66%), Gaps = 13/449 (3%) Strand=Plus/Plus Query 44855 GAACGATTGGTCGCATTCGCCATTGTCGAAGGAGTGTTCTTTTCGGGGAGTTTTGCGGCG 44914 ||| || ||||||| |||||| ||||||| || |||||||| ||| || || | Sbjct 768 GAAAGACTGGTCGCGTTCGCCTCCATCGAAGGTGTCTTCTTTTCCGGGTCCTTCGCCTCC 827 Query 44915 ATATTTTACATGAAAACCAAGGGAGTGATGCCCGGACTGACGTTTAGCAACGAATTGATT 44974 || || | |||| | | || |||||||||| |||| || ||||||| |||| Sbjct 828 ATCTTCTGGTTGAAGAAAAGAGGTATGATGCCCGGTTTGACCTTCTCCAACGAACTGATC 887 Query 44975 TCGAGAGACGAAGGTCTGCACACCAACTTTGCCTGCCTCTACTATAATACGAGAGTCGAT 45034 | |||||||||||| |||||||| |||||||||| | | | | | | || Sbjct 888 TGCAGAGACGAAGGTTTGCACACCGACTTTGCCTGTTTGT----TGTTCGCCCACTTGAA 943 Query 45035 CAA-AAGTTGGACGCGCCCACCGTCAACGACATGTTCTCCGAAGCCGTGGCCATCGAGAT 45093 || ||| |||| | ||| |||| | | || || |||| ||||| | ||||| | Sbjct 944 AAACAAGCCGGACCCAGCCATCGTCGAGAAAATCGTCACCGAGGCCGTCGAGATCGA-AC 1002 Query 45094 GGAATTTTTTGCT-GAGGCTCTGCCCGAATCGTTGGTGGGAATGAACGCGAATATGATGA 45152 | | || || || || |||| | | ||| | || |||||||| | |||||| Sbjct 1003 AAAGATACTTCCTAGACGCCTTGCCAGTCGCCTTGCTAGGTATGAACGCCGACTTGATGA 1062 Query 45153 GAAAGTACATTGAGTTTGTCGCCGATCGTCTTCTCGTCCAGTTAAAGTATCCCAAGATGT 45212 | ||| | ||||| ||||| || | ||| | ||| || ||| ||||| || Sbjct 1063 ACCAATACGTCGAGTTCGTCGCAGACAGACTTTTGGTCGCCTT-CGGTA--ACAAGAAGT 1119 Query 45213 ACTATA---CTGAGAACCCATTCGAGTTTATGAACAATATTTCGTTGGAGGGCAAAACTA 45269 |||| | || ||||| ||||| || ||| | || ||||| |||| || || || | Sbjct 1120 ACTACAAGGTCGACAACCCCTTCGATTTCATGGAAAACATTTCCTTGGCCGGTAAGACCA 1179 Query 45270 AtttttttGAGAAACGCGTCGGCGAATAC 45298 | || || || || | ||| ||| ||| Sbjct 1180 ACTTCTTCGAAAAGAGAGTCTCCGACTAC 1208 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433809330077620