Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F000732305.1_202014-07-21]
3,985 sequences; 11,595,011 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq1567 210 2e-49
seq2084 201 1e-46
seq3120 120 3e-22
>seq1567
Length=2367
Score = 210 bits (232), Expect = 2e-49
Identities = 430/638 (67%), Gaps = 1/638 (0%)
Strand=Plus/Plus
Query 23341 TTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCG 23400
||| || || |||| |||||||| || ||||||||||| ||||| || | || ||
Sbjct 1246 TTCGACACGCTTCATGAAAAGATCGGGAATCCATAGAGCAGGGAACAAATCTCTTGCACG 1305
Query 23401 CACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCA 23460
| || || || || ||||| | | ||| | |||||| || | ||| ||||||||
Sbjct 1306 AATTTCTTCCTTACCATGAGTCTTTCTGATATCGACAAAGTCGAAGATGTCTGCATGCCA 1365
Query 23461 CGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACG 23520
||||| | | ||| |||||| || || |||||||| || || || || || ||||||||
Sbjct 1366 TGGCTCCAAGAAAAGGGCAAAGGCACCGGGTCTCTTGTTACCACCTTGGTCCACGTAACG 1425
Query 23521 GGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCC 23580
|| ||||||||| | || | | ||| || | | ||||| || | ||| ||
Sbjct 1426 TGCAGTGTTGTTGAAGACACGGATCATGGGAATCAACCCGTTTGAAGTACCGTTGGTACC 1485
Query 23581 CGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGA 23640
|| | | || ||| | | |||| |||| | || | ||| | || || | |
Sbjct 1486 TGCAATATAAGAGCCTGTGGAACGAATATTGTTGATATGAAGACCAACACCACCTGCAGT 1545
Query 23641 TTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTT 23700
|| || ||||| || || | ||||| ||||||||| || || || ||| ||| || ||
Sbjct 1546 CTTGGAAATCATGGCACACTCTTTCAAAGTGTCGTAAATACCTTCAATGGAGTCGTCCTT 1605
Query 23701 GGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGT 23760
| || | || |||||| ||||||||||| | | |||||| |||| || |||||
Sbjct 1606 CATGGCAATCAGGAAACAAGAAGACATTTGAGGATGTGGCGTACCGGCATTAAATAGTGT 1665
Query 23761 CGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATC 23820
||| ||||| || ||||||| |||||| | ||||| || | | ||| ||
Sbjct 1666 GGGGGAAGCGTGGGTGAAGTATCTCAACGACATCAAGTTGTAAGTCTTCAGCACGGACTC 1725
Query 23821 AATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGAC 23880
|| || ||||| ||||| | ||| || ||||| | || | ||| || | ||| |
Sbjct 1726 GATATCGCTGCCGTGAATACCTAGGGCCACACGCATGACCAAATGTTGGGGACGTTCGGC 1785
Query 23881 CGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTC 23940
| | |||| | | | | ||| || ||||||| || || ||||| |||||||||
Sbjct 1786 CACTTCACCGTCTAGTCTTAGCAGGTA-GAACGTTCCAGAGTCTTAAACCCAAAATAGGT 1844
Query 23941 ATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCA 23978
|| || || || | |||| ||| |||||||| ||||
Sbjct 1845 GTACTTGAAATCTCTGTCGTACACGATGGCCGAGTTCA 1882
>seq2084
Length=1521
Score = 201 bits (222), Expect = 1e-46
Identities = 420/617 (68%), Gaps = 8/617 (1%)
Strand=Plus/Plus
Query 57690 GTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTT 57749
||| | || || |||||||| ||||| ||||| || ||||| || |||||||| | ||
Sbjct 489 GTGCTTGCCTTCTTCGCCGCCTCCGACGGTATCGTCAACGAAAACTTGGTCGAGAACTTC 548
Query 57750 TCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAA 57809
|| || || || | ||||||| | | || ||||| || || | || || ||
Sbjct 549 TCCACCGAGGTCCAGATCCCGGAGGCCAAGAGTTTCTACGGGTTCCAGATCGCAATCGAG 608
Query 57810 AACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGACGAG 57869
||| | || || |||| || || | | ||||| || ||| | |||||| | | ||
Sbjct 609 AACATCCACTCCGAAACCTACTCCTTGTTGATCGACACCTACATCAAGGACCCCAAGGA- 667
Query 57870 AAACGTAGACT-GTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTG 57928
|| || || ||||||||| ||||| || || || | ||| | ||||||| || ||
Sbjct 668 AAGCGAGTTCTTGTTCAACGCCATCGACACCATCCCAGAAATCTGCGAGAAGGCCGAATG 727
Query 57929 GTCAATCAAATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGC 57988
| | | | |||||| | |||| ||| ||||| || || || ||||||||||
Sbjct 728 GGCCCTTAGATGGATCCAGGACGCCGATGCCCTGTTCGGTGAAAGACTGGTCGCGTTCGC 787
Query 57989 CGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACG 58048
| || |||||||| | |||||||| || ||| || | || || ||| |||||||| |
Sbjct 788 CTCCATCGAAGGTGTCTTCTTTTCCGGGTCCTTCGCCTCCATCTTCTGGTTGAAGAAAAG 847
Query 58049 CGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCA 58108
|| |||||||||| |||| || |||||| |||| | | ||||| ||| | ||
Sbjct 848 AGGTATGATGCCCGGTTTGACCTTCTCCAACGAACTGATCTGCAGAGACGAAGGTTTGCA 907
Query 58109 TACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACC-GACGC-GGGATCGC 58166
|| || ||||| || | ||| | | ||| | || || || ||| | | ||||
Sbjct 908 CACCGACTTTGCCTGTTTGTTGTTCGCCCACTTGAAAAACAAGCCGGACCCAGCCATCG- 966
Query 58167 ATCTTGGACATTATCACCGAGGCGGTCGCGATCGAA-AATGAGTTTGTCACCGAAGCCCT 58225
|| | | || |||||||||| |||| ||||||| || || | || || ||| |
Sbjct 967 -TCGAGAAAATCGTCACCGAGGCCGTCGAGATCGAACAAAGA-TACTTCCTAGACGCCTT 1024
Query 58226 ACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGC 58285
|| || ||| |||| ||||||||| || |||||| | ||| | ||||| || ||
Sbjct 1025 GCCAGTCGCCTTGCTAGGTATGAACGCCGACTTGATGAACCAATACGTCGAGTTCGTCGC 1084
Query 58286 CGACAGACTTTTGCTCG 58302
|||||||||||| |||
Sbjct 1085 AGACAGACTTTTGGTCG 1101
>seq3120
Length=488
Score = 120 bits (132), Expect = 3e-22
Identities = 233/342 (68%), Gaps = 4/342 (1%)
Strand=Plus/Plus
Query 23598 TTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGC 23657
|||| |||| |||||||| || | ||| || || || | | ||| || |||| || |
Sbjct 77 TTGCACGAATGTTGTGAATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCAC 136
Query 23658 ATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAAC 23717
||| |||| |||||||||||| || || ||| || || || | || || | |||||
Sbjct 137 ATTCCTTCAAAGTGTCGTAGATACCTTCAATGGAATCATCCTTCATTGCAACTAGGAAAC 196
Query 23718 ACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAA 23777
| || |||||||| | || || ||| | || ||| | || || |||||| ||||
Sbjct 197 AGGAGGACATTTGAGGCTTTGGTGTACCAGCGTTGAATAAAGTTGGAGAGGCGTGAGTAA 256
Query 23778 AGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTA 23837
||||| ||||| | || || || || | ||||| ||||||| || ||||| |
Sbjct 257 AGTATTTTAGGGACATCAAGTTATAGGTTTCTAGAGCGGCCTCAATGTTATCACCGTGAA 316
Query 23838 TACCGATGGCGACGCGCATCATCATGTATTGAGGTC--TCTCGACCGTGACGCCGTTAAT 23895
|||| | |||||| | ||| || | || ||| || | || | | ||| ||||| |
Sbjct 317 TACCTAAGGCGACTCTCATGATTAAGTGTTGTGGACGTTCAGCAACTTGA--CCGTTGAC 374
Query 23896 TTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATA 23937
| | || | || ||||||| | |||||||| || || ||
Sbjct 375 TCTCAATAAGTACGAACGTTCTAAAGTTTTAAAACCGAAGTA 416
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445744195261200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |