Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F000732305.1_202014-07-21]
3,985 sequences; 11,595,011 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq2084 123 5e-23
seq1567 84.2 4e-11
>seq2084
Length=1521
Score = 123 bits (136), Expect = 5e-23
Identities = 284/426 (67%), Gaps = 15/426 (4%)
Strand=Plus/Plus
Query 101936 GAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGGATCAAGAACAGGGGTATT 101995
||||| |||||||| || | ||||| ||||| |||||| | ||||| || |||||
Sbjct 795 GAAGGTGTCTTCTTTTCCGGGTCCTTCGCCTCCATCTTCTGGTTGAAGAAAAGAGGTATG 854
Query 101996 TTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGACGAAGGTCTTCATCGCGAC 102055
|||| ||| | |||| |||||| || | || | || ||||||||| | || ||||
Sbjct 855 ATGCCCGGTTTGACCTTCTCCAACGAACTGATCTGCAGAGACGAAGGTTTGCACACCGAC 914
Query 102056 TTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCATCAAGAGAAAGGATTCTT 102115
||||| || || |||| | |||| | | | | || || || |
Sbjct 915 TTTGCCTGTTTGTTGTTCGCCCAC-------TTGAAAAACAAGCCGGACCCAGCCATCGT 967
Query 102116 G----AAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTTCTCACAGTTTCCCTGCC 102171
|||| ||||| || |||||| || |||||| || || || || ||||
Sbjct 968 CGAGAAAATCGTCACCGAGGCCGTCGAGATCGAACAAAGATACTTCCTAGACGCCTTGCC 1027
Query 102172 TGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTACATTGAATTTGTGGCAGA 102231
|| || | || |||||| | | ||||||| ||| ||| | || || || |||||
Sbjct 1028 AGTCGCCTTGCTAGGTATGAACGCCGACTTGATGAACCAATACGTCGAGTTCGTCGCAGA 1087
Query 102232 TAAACTATTGGTTGAAATGGG--ACTAGAAAAGCACTATAATGTTACCAACCCCTTCCCA 102289
| ||| ||||| | | || || |||| | |||| || || ||||||||||
Sbjct 1088 CAGACTTTTGGTCGCCTTCGGTAACAAGAA--GTACTACAAGGTCGACAACCCCTTCGAT 1145
Query 102290 TTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTGAAAAGAGAGTCGCCGAG 102349
|||||||| || |||||| | | |||||||||||| || |||||||||||| ||||
Sbjct 1146 TTCATGGAAAACATTTCCTTGGCCGGTAAGACCAACTTCTTCGAAAAGAGAGTCTCCGAC 1205
Query 102350 TATCAA 102355
|| |||
Sbjct 1206 TACCAA 1211
>seq1567
Length=2367
Score = 84.2 bits (92), Expect = 4e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 94792 CCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATG 94851
|| || ||||||||||| || || || ||| || | ||| || |||||||| ||||||
Sbjct 1535 CCACCTGCAGTCTTGGAAATCATGGCACACTCTTTCAAAGTGTCGTAAATACCTTCAATG 1594
Query 94852 CTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGG-TGTGACTGTTCCACA 94910
|| || | | | | | ||||| || || || | ||| || |||| | || ||
Sbjct 1595 GAGTCGTCCTTCATGGCAATCAGGAAACAAGAAGACATTTGAGGATGTGGC-GTACCGGC 1653
Query 94911 ATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTC 94970
|||||| |||||||||||||| ||||| || || | |||||| | | || || |
Sbjct 1654 ATTAAATAGTGTGGGGGAAGCGTGGGTGAAGTATCTCAACGACATCAAGTTGTAAGTCTT 1713
Query 94971 AATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCAT 95018
| || || | ||| || |||||||| || | |||||||||||
Sbjct 1714 CAGCACGGACTCGATATCGCTGCCGTGAATACCTAGGGCCACACGCAT 1761
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989533474005675
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |