Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F000732305.1_202014-07-21] 3,985 sequences; 11,595,011 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq2589 134 1e-26 seq1567 118 1e-21 seq3120 113 4e-20 >seq2589 Length=927 Score = 134 bits (148), Expect = 1e-26 Identities = 306/453 (68%), Gaps = 12/453 (3%) Strand=Plus/Minus Query 37122 TAGGTGTGGATTTACAACCTGAAAATCTCCAGATAATACTCTTCTTGTATATATATTGCT 37181 || || |||||| || || ||||| || ||||||| || | | | || || ||| Sbjct 925 TAAGTATGGATTGACGACTTGAAATTCACCAGATAGAACACGACGAGAGTACATGTTGGA 866 Query 37182 AGTATATGGTTCAATGGACTCATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCAT 37241 |||| |||||| | |||| || | || ||| || || || || |||||||||||||| Sbjct 865 AGTAACTGGTTCGAAACACTCGTTGTAACCTAAAATCTGGGAAGTGGATGCAGTAGGCAT 806 Query 37242 TGGTGCTAT--TAGAAGGCTATTTCTCAATCCATGTGTATTAATTCTCTTTTTT---AGT 37296 ||||| || | ||| | |||| | ||||| | | || || ||| | ||| Sbjct 805 AGGTGCCATGGTCAAAGAGT--TTCTAACACCATGCTTCATGATG-TCATTTCTCAAAGT 749 Query 37297 TCATTCCAATCCCATAAATCTGTTGGGTTCTTTAACC-ACATATCATATTGTAGAATACC 37355 || ||||||||| | | | || |||| || || |||| || |||| || ||||| Sbjct 748 --ATCCCAATCCCACATACC-GTAAGGTTTTTCGTCCCACATGTCGAATTGAAGTATACC 692 Query 37356 TTTACTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCGTAAATTTTAGCTAGTTCGCA 37415 || | |||||||| | | | || || || || || | ||| |||||| || || Sbjct 691 TTGAGAAGCTGGAGAGCCTTGGAAGGTTTCGTATGGGCCATCTCTTTGAGCTAGCTCACA 632 Query 37416 ACTAGATTCTAGTGCGGCATAATATATTGTTTCGAAAATTTGTATATTTAATATTTTTGC 37475 | | ||| | | |||| || || ||||| || ||||||||||||| || ||| Sbjct 631 AGAGGCTTCCATGGAAGCATGGTACATGGTTTCAAAGATTTGTATATTTAGTAAGCGTGC 572 Query 37476 TTCTTCGCTATCGAATGCATAGCCCAATAATATAAACACATCAGCCAAACCCTGAACACC 37535 ||||||| ||||||| | | ||| || || || ||||||||||| || ||||| Sbjct 571 TTCTTCGGAGTCGAATGGTAAACGCAACAACATGAAAGTGTCAGCCAAACCTTGGACACC 512 Query 37536 GATACCTATGGGTCTATGTTTCTTATTAGATCT 37568 | | | || || || ||| || |||||||||| Sbjct 511 CAAAGCAATCGGCCTGTGTCTCATATTAGATCT 479 >seq1567 Length=2367 Score = 118 bits (130), Expect = 1e-21 Identities = 1108/1779 (62%), Gaps = 68/1779 (4%) Strand=Plus/Plus Query 36814 GATGCCGATTTTGTTCTCATATAATACATTCCAGTTTTTAGCCCCAATCTCCATCCGTAA 36873 || || | || |||||||| || ||||| || || || | ||| |||| ||||| Sbjct 29 GAAGCGGCTTGTGTTCTCAAGTAGTACATACCCGTCTTCAAACCCTTCTTCCAACCGTAG 88 Query 36874 AAATGCATACTGGTCAGTTTTGCGTATGTAGGATTATC-TATATATATTGTCATTGATTG 36932 ||||||||||| || | |||| | || | | | || || | | ||| || || Sbjct 89 AAATGCATACTTGTAA-TTTTACCCATTGATGGTGATTGTAGGAACAAATTCAAGGAGTG 147 Query 36933 ACTTTGATCTAT--AAACGCACCTCTGTCGGCTGCCATTTCTAAAATACATTTTTGAGAT 36990 |||||| || ||| | | | | | || ||||| | | |||| |||||||| Sbjct 148 GGATTGATCAATGTAAATGGAACGAT--CAGCAGCCATGTTGATAATAGTCTTTTGAGAG 205 Query 36991 ATCTCCCAAACCGTTTTATATATTTGTTTTATATTATCTGGTAAATCT---AAATGTTGA 37047 || ||||| || |||||||||| | ||| | || | || | | | |||| || | Sbjct 206 ATTTCCCAGACAGTTTTATATAGATCTTTCAAATCTTGAGGAACGTTTGGTAAATCTTTA 265 Query 37048 ATAGAACCATTATG--TAA-CACA-ATTGTATTCTTTATGTCATTATTCCACATATTTCT 37103 || || ||||| || ||| || | ||||| ||| | | |||| | || || | Sbjct 266 ATGGAGCCATTTTGAGTAATCAAATATTGT-TTCATACTATCAT-----CCCAAATGCCC 319 Query 37104 ACTT--ATTAGTTCTCTCAATAGGTGTGGATTTACAACCTGAAAATCTCCAGATAATACT 37161 | | | || || | | || || |||||| || || || || || |||||||| || Sbjct 320 AGATCGACTAAATCACGTAGTAAGTATGGATTGACGACTTGGAATTCACCAGATAAGACA 379 Query 37162 CTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACTCATTATTACTTAATATTTGA 37221 | | | || || || ||| |||||| | ||||||| | | | ||||| Sbjct 380 CGACGAGAGTACATGTTTGAAGTGACTGGTTCGAAACACTCATTGTACCCAAGAATTTGG 439 Query 37222 GATGTAGATGCAGTAGGCATTGGTGCTAT--TAGAAGGCTATTTCTCAATCCATGTGTAT 37279 ||||| || || || |||||||| || || | ||| | |||| || |||||| | Sbjct 440 GATGTTGAAGCGGTTGGCATTGGGGCCATGGTTAAAGAGT--TTCTTAACCCATGTTTCA 497 Query 37280 TAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGGGTT--CTTTAACCACAT 37337 ||| ||| || | | ||||||||| | | ||| || | || |||||| Sbjct 498 CAATGTCCTTCTTCAAAGTGTCCCAATCCCACATGCCAAATGGCTTAGCATT--CCACAT 555 Query 37338 ATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCGTA 37397 || | |||| |||||| ||| || ||||| | | | | || ||| || | Sbjct 556 GTCGAACTGTAAAATACCCTTAGAGGCAGGAGAGCCTTCAAAAGTGGAATATTTACCTTC 615 Query 37398 AATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATTGTTTCGAAAATTTG 37457 ||| ||||| || ||| || ||| || | |||| || || |||||||||||||| Sbjct 616 CTTTTGAGCTAACTCACAAGAAGCTTCAAGGGTAGCATGGTAAATAGTTTCGAAAATTTG 675 Query 37458 TATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAGCCCA--ATAATATAAACACA 37515 | |||| | ||||| |||| ||| | || |||| | | || || |||||| | Sbjct 676 TTTATTAAGTATTTGAGCTTTTTCACATTCAAATGGTAAACGCAGCATCATATAA--GTA 733 Query 37516 TCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTCTTATTAGA---TCTAGAC 37572 || |||||||| ||||| || | | || |||||||||||| | ||||| ||||| | Sbjct 734 TCGGCCAAACCTTGAACCCCCAGGGCAATAGGTCTATGTTTCATGTTAGAGTTTCTAGCC 793 Query 37573 GATTCTATCACTGGATAATAATTGATATCTATTATTTTATTTAGATTTTTAACTAGTATT 37632 ||| |||||||||||| || || || | | |||| | || | | | | | Sbjct 794 ---TCTGGCACTGGATAATAGTTACGGTCGATGACTCTATTCAAGTTATGAGTGATGACT 850 Query 37633 TTCGTAAT-TATTCTCAACTTGTCGAACAT-AAATACGTTATTATTAACAAATT-----T 37685 || | ||| | | | ||||| | ||| | | || || ||| || || Sbjct 851 TTAGCAATGTCATGTAAACTT-TGGAAATTGTAGGTCGCCGTT-TTACCATCTTCCGAAG 908 Query 37686 ACTCAACGA-------------AATAGATCCTAGATTACATACAGCAACTTCATCTTCGT 37732 |||||||| ||| || ||| |||||| |||||| ||||||| | Sbjct 909 TCTCAACGAATGCTGGTAGAGCAATGGAAGCTAAATTACAAACAGCAGTTTCATCTGGGG 968 Query 37733 TACTAAATTGTATAATCTCTGTACAGAGATTACTCGATCTAATTGTTCCCAAATTGCTTT 37792 | | | | | || || ||| | || |||| | || || |||| || || Sbjct 969 AAGAATACTCGACGATTTCGCAACACAAGTTTGACGATTTGATGGTACCCAGGTTCTGTT 1028 Query 37793 GATTGGATTTTTTATTACAAGAATCTTTATATAGTATATACGGCGTTCCTTGTTCTATTT 37852 | |||| ||| | ||||| | ||| ||||| | || | || || || |||| ||| Sbjct 1029 GGTTGGTCTTTCTGTTACAGGCATCCTTATAAACCATGAAGGGTGTACCGGTTTCTGTTT 1088 Query 37853 GAGCCTCGATAATAGATTTCCATAAACTTCTTGCTTTAACGATCGCTTTA--Attttttt 37910 | || | | || | | ||||| || || || ||| | |||| | || Sbjct 1089 GTGCTTGCAAGATGGCGTACCATACCTTTTGAGCCTT---GATGGTTTTACCACGACCTT 1145 Query 37911 CTTTGTTTCGTATTCTATATATAATTTGTTAAAATCATTCCCCCATACATCGCATAATCC 37970 | | ||||||| |||||| | | || || | ||||| || ||| || || Sbjct 1146 C--TCTTTCGTAACGGGTATATAGCTCTTCGAATTCTTCACCCCAAACGTCGTCCAAACC 1203 Query 37971 TGGACATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAA 38030 ||| | | ||| | | || | ||| | |||| | ||| || || | ||| || Sbjct 1204 TGGGGCAGCACTTGGTGAGAATAAGGTCCAGGCCCCATCCTCTTCGACACGCTTCATGAA 1263 Query 38031 TAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCCTAC 38090 | ||| || | ||||| |||| || |||||| | | | | |||||| || || Sbjct 1264 AAGATCGGGAATCCATAGAGCAGGGAACAAATCTCTTGCACGAATTTCTTCCTTACCATG 1323 Query 38091 ATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGA 38150 | ||||||| | | ||| ||||| || || || |||||||| || | ||| | Sbjct 1324 AGTCTTTCTGATATCGACAAAGTCGAAGATGTCTGCATGCCATGGCTCCAAGAAAAGGGC 1383 Query 38151 CATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATTATATAT 38210 | || || ||||| || | ||| || || | | || | | ||||| || | | Sbjct 1384 AAAGGCACCGGGTCTCTTGTTACCACCTTGGTCCACGTAACGTGCAGTGTTGTTGAAGAC 1443 Query 38211 TCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAAGTACCCTT 38270 | | ||| || | | || || || | ||||| |||| | ||||||| || | Sbjct 1444 ACGGATCATGGGAATCAACCCGTTTGAAGTACCGTTGGTACCTGCAATATAAGAGCCTGT 1503 Query 38271 AGCTCGTATATTACTTATCGACAATCCTATTCCACCTGCATGTTTTGATATTAAAGCGCA 38330 | || ||||| | || | || | ||||||||| || || || | || || Sbjct 1504 GGAACGAATATTGTTGATATGAAGACCAACACCACCTGCAGTCTTGGAAATCATGGCACA 1563 Query 38331 TTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACA 38390 | ||| || || || | |||||||| || ||| ||||| || | | | ||||| Sbjct 1564 CTCTTTCAAAGTGTCGTAAATACCTTCAATGGAGTCGTCCTTCATGGCAATCAGGAAACA 1623 Query 38391 ACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAA 38450 | |||||||||||| ||| || ||||| ||||||| ||| || || || || |||| Sbjct 1624 AGAAGACATTTGAGGATGTGGCGTACCGGCATTAAATAGTGTGGGGGAAGCGTGGGTGAA 1683 Query 38451 CCATTTTTCCGACAAATAATTATATGTTTCTATTACATCATCTATATCACCGCCGTGAAT 38510 || | ||||| | || || || | | || || ||||| | ||||||||| Sbjct 1684 GTATCTCAACGACATCAAGTTGTAAGTCTTCAGCACGGACTCGATATCGCTGCCGTGAAT 1743 Query 38511 ACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTC 38549 |||||| | || | ||| | || |||||| || | ||| Sbjct 1744 ACCTAGGGCCACACGCATGACCAAATGTTGGGGACGTTC 1782 >seq3120 Length=488 Score = 113 bits (124), Expect = 4e-20 Identities = 230/339 (68%), Gaps = 2/339 (1%) Strand=Plus/Plus Query 38296 CCTATTCCACCTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAATATACCT 38355 || || ||||| ||| ||| || || ||||| |||| || || || || | |||||| Sbjct 103 CCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAAGTGTCGTAGATACCT 162 Query 38356 TCTATACTGTCATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTT 38415 || || |||||||| |||| | || ||||| |||||||||||| ||| || Sbjct 163 TCAATGGAATCATCCTTCATTGCAACTAGGAAACAGGAGGACATTTGAGGCTTTGGTGTA 222 Query 38416 CCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAATTATAT 38475 || ||||| ||||| || ||||| || || | || ||||| |||| | ||||| Sbjct 223 CCAGCGTTGAATAAAGTTGGAGAGGCGTGAGTAAAGTATTTTAGGGACATCAAGTTATAG 282 Query 38476 GTTTCTATTACATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCATA 38535 ||||||| | | || || | | | ||||||||||||| | || ||||| | | Sbjct 283 GTTTCTAGAGCGGCCTCAATGTTATCACCGTGAATACCTAAGGCGACTCTCATGATTAAG 342 Query 38536 TGTTGTGGTCTTTCTATTATTTTATTATTCTGTTTAAGTAGATACGATTTTTCTAATGTT 38595 |||||||| | ||| | || | || | | | || ||||| |||||| ||| Sbjct 343 TGTTGTGGACGTTCAGCAACTTGACCGTTGACTCTCAATAAGTACGAACGTTCTAAAGTT 402 Query 38596 TTTATTCCAAAATAACTATA-TGAATAATCTCTATCGTA 38633 || | || || ||||| || |||| ||||||| || || Sbjct 403 TTAAAACCGAAGTAACTGTACTGAA-AATCTCTGTCATA 440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468501461608400