Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F000732305.1_202014-07-21]
3,985 sequences; 11,595,011 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq1567 214 2e-50
seq3120 127 3e-24
>seq1567
Length=2367
Score = 214 bits (236), Expect = 2e-50
Identities = 736/1135 (65%), Gaps = 26/1135 (2%)
Strand=Plus/Plus
Query 65814 TTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATG 65873
|||||||| || | || ||||| || ||||| ||||||| ||||||||||||| |||
Sbjct 1007 TTGATGGTACCCAGGTTCTGTTGGTTGGTCTTTCTGTTACAGGCATCCTTATAAACCATG 1066
Query 65874 AATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTT 65933
|| || ||||| ||||| | || | || | || || | ||| || | |||||||
Sbjct 1067 AAGGGTGTACCGGTTTCTGTTTGTGCTTGCAAGATGGCGTACCATACCTTTTGAGCCTTG 1126
Query 65934 ATTATAGATTTGTATCTC--TTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGT 65991
|| | ||| || | | |||||||||||| | ||||| | |||||| || |
Sbjct 1127 AT----GGTTT-TACCACGACCTTCTCTTTCGTAACGGGTATATAGCTCTTCGAATTCTT 1181
Query 65992 CTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGT 66051
| |||||||| | |||||| || || || || | | || | ||| | || |
Sbjct 1182 CACCCCAAACGTCGTCCAAACCTGGGGCAGCACTTGGTGAGAATAAGGTCCAGGCCCCAT 1241
Query 66052 CATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGG 66111
| || | || || ||||| || ||||| |||||||| ||||| || |||||||| |
Sbjct 1242 CCTCTTCGACACGCTTCATGAAAAGATCGGGAATCCATAGAGCAGGGAACAAATCTCTTG 1301
Query 66112 TTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAAT 66171
| | ||| || || || | ||||| | | ||||| || | | || || ||
Sbjct 1302 CACGAATTTCTTCCTTACCATGAGTCTTTCTGATATCGACAAAGTCGAAGATGTCTGCAT 1361
Query 66172 GCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGT 66231
|||| || |||||| | | ||| | | || || | ||||| || || || || | ||
Sbjct 1362 GCCATGGCTCCAAGAAAAGGGCAAAGGCACCGGGTCTCTTGTTACCACCTTGGTCCACGT 1421
Query 66232 ATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGG 66291
| | || ||||| || | || | | ||| ||||| | || || || ||||| ||||
Sbjct 1422 AACGTGCAGTGTTGTTGAAGACACGGATCATGGGAATCAACCCGTTTGAAGTACCGTTGG 1481
Query 66292 TCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAAT-TGATAGACCTATTCCCCCT 66350
| || | ||||| || | | ||||||||| | || ||| ||||| | || |||
Sbjct 1482 TACCTGCAATATAAGAGCCTGTGGAACGAATATTGTTGATATGA-AGACCAACACCACCT 1540
Query 66351 GCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCA 66410
|| | || || || | || || ||| || || || || || || || || ||
Sbjct 1541 GCAGTCTTGGAAATCATGGCACACTCTTTCAAAGTGTCGTAAATACCTTCAATGGAGTCG 1600
Query 66411 TCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAAT 66470
||| ||||| || || ||||| ||||||||| || | || || |||||||||
Sbjct 1601 TCCTTCATGGCAATCAGGAAACAAGAAGACATTTGAGGATGTGGCGTACCGGCATTAAAT 1660
Query 66471 AAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCT 66530
| || || |||||||| || || || | || | | ||||| |||| | |
Sbjct 1661 AGTGTGGGGGAAGCGTGGGTGAAGTATCTCAACGACATCAAGTTGTAAGTCTTCAGCACG 1720
Query 66531 GAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTT 66590
|| || ||||| | ||||| |||| || |||||||| | || || || || | |
Sbjct 1721 GACTCGATATCGCTGCCGTGAATACCTAGGGCCACACGCATGACCAAATGTTGGGGACGT 1780
Query 66591 TCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAA 66650
|| | | | || || | | | || ||| || ||||| ||| ||||| ||||||
Sbjct 1781 TCGGCCACTTCACCGTCTAGTCTTAGCAGGTA-GAACGTTCCAGAGTCTTAAACCCAAAA 1839
Query 66651 TAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATT 66708
||| |||| ||||| |||| ||||| | || ||||||| || |||| || | ||
Sbjct 1840 TAGGTGTACTTGAAA--TCTCTGTCGTACACGATGGCCGAGTTCAGCGTATCTTTGTTTT 1897
Query 66709 TGTTAACTACATCCATGGTAATACTT-----GAAATAATCGGAGAATGTTTCCCATTTTT 66763
| || | || || | |||| ||||| || || | ||| ||||| |
Sbjct 1898 CCATGACAATAT---TG--TAGACTTCATCCGAAATCATAGGGGCATGCTTCCCCGTGGC 1952
Query 66764 AGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTT 66823
||| ||||| ||| | || ||||| || || | || | ||| | || | ||
Sbjct 1953 AGGGTTGACCCAGTCGTGCAAGTCCTCAATGACCTTGGAGAACTGCTTTGTGGTCTGCTT 2012
Query 66824 GTGTAGATTTGATACGGCTATTCTAGCGGCTATAATGGCATAATCCGGATGTTGTGTAGT 66883
|||| || || | ||| ||||||||||| | |||| ||||| || || || ||
Sbjct 2013 ATGTAAGTTGGAGATGGCAATTCTAGCGGCCAACGTGGCGTAATCAGGGTGCACCGTGGT 2072
Query 66884 ACAAGT-GGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCC 66937
|| || || | | ||||| ||||| |||||| ||| || || || || ||
Sbjct 2073 -CATGTATGCACATGTCTCGGCAGCCAGGTTGTCCAGTTCGACGGTGGTGACACC 2126
>seq3120
Length=488
Score = 127 bits (140), Expect = 3e-24
Identities = 315/470 (67%), Gaps = 6/470 (1%)
Strand=Plus/Plus
Query 66237 GCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCG 66296
|| ||||| || | || | | ||| ||||| | || || || || || || || ||
Sbjct 1 GCAGTGTTGTTGAAGACACGGATCATAGGAATTAACCCGTTAGAAGTCCCGTTCGTACCA 60
Query 66297 GAGATATAGCTTCCACTTGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATT 66356
| || || || |||||||||| || ||| |||||| || || || || ||
Sbjct 61 GCAATGTAAGAGCCGGTTGCACGAATGTTGTGAATATGTAGACCAATACCACCAGCAGTT 120
Query 66357 TTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATC 66416
|| || || || || ||| || || || || ||||| || || || ||||||| ||
Sbjct 121 TTGGAAATCAAAGCACATTCCTTCAAAGTGTCGTAGATACCTTCAATGGAATCATCCTTC 180
Query 66417 ATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTA 66476
|| || ||| |||||| |||||||| | || || || || ||||| ||
Sbjct 181 ATTGCAACTAGGAAACAGGAGGACATTTGAGGCTTTGGTGTACCAGCGTTGAATAAAGTT 240
Query 66477 GGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCT 66536
||||| ||||| ||||| ||||| || | | || || || || | ||| | ||
Sbjct 241 GGAGAGGCGTGAGTAAAGTATTTTAGGGACATCAAGTTATAGGTTTCTAGAGCGGCCTCA 300
Query 66537 ATATCC-CATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAAC 66595
|| | || | ||||| |||| ||||| | ||| | | ||| || || | |||| |
Sbjct 301 ATGTTATCACCG-TGAATACCTAAGGCGACTCTCATGATTAAGTGTTGTGGACGTTCAGC 359
Query 66596 GATCTTGTT-GTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGT 66654
| |||| ||| | | |||| ||||| || ||| |||||||||||||| || ||
Sbjct 360 AA-CTTGACCGTTGACTCTCAATAAGTACGAACGTTCTAAAGTTTTAAAACCGAAGTAAC 418
Query 66655 TGTA-TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTT 66703
|||| |||||| |||| || || | |||| | ||||| |||||||||||
Sbjct 419 TGTACTGAAAA-TCTCTGTCATAGACAATAGCTGAGTTTAGTTTATCCTT 467
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658140014767400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |