Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F000732305.1_202014-07-21] 3,985 sequences; 11,595,011 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq1567 242 5e-59 seq2084 134 2e-26 seq3120 123 4e-23 seq2589 95.1 2e-14 >seq1567 Length=2367 Score = 242 bits (268), Expect = 5e-59 Identities = 1359/2142 (63%), Gaps = 60/2142 (3%) Strand=Plus/Plus Query 78714 CAATG-TGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 78772 ||||| | |||||||||| || || |||| || || | | |||||||| ||||| | Sbjct 6 CAATGGTAAATTGAATGGCTGCAGAAGCGGCTTGTGTTCTCAAGTAGTACATACCCGTCT 65 Query 78773 TTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGA-ATAACTCG-GATC 78830 | | ||| |||| ||||||||||||||||| || | ||| || | | ||| Sbjct 66 TCAAACCCTTCTTCCAACCGTAGAAATGCATACTTGTAATTTTACCCATTGATGGTGAT- 124 Query 78831 TGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCAT 78890 || || | ||||| || || |||||| ||| | | || |||||||| Sbjct 125 TG-TAGGAACAAATTCAAGGAGTGGGATTGATCAATGTAAATGGAACGATCAGCAGCCAT 183 Query 78891 TTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTC 78950 || || || |||||||| | |||||||| | ||||||||| | || | ||||| Sbjct 184 GTTGATAATAGTCTTTTGAGAGATTTCCCAGACAGTTTTATATAGATCTTTCAAATCTTG 243 Query 78951 TGGAAGGTTTGT---ATTCTGAATGGATCCACCATCTGCCATAATCC--TATTCTTGATC 79005 |||| ||||| || | |||||| ||| | | ||||| |||| || Sbjct 244 AGGAACGTTTGGTAAATCTTTAATGGAGCCATTTTGAG---TAATCAAATATTGTTTCAT 300 Query 79006 TCT-TCATTCCATAATTTTCTC-TCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTT 79063 || |||| ||| ||| | ||| |||| | | || | | ||||| || |||| Sbjct 301 ACTATCATCCCA-AATGCCCAGATCGACTAAATCACGTAGTAAGTATGGATTGACGACTT 359 Query 79064 GAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATT 79123 | ||||| ||||| || || | |||| ||| || || || |||||| | | | Sbjct 360 GGAATTCACCAGATAAGACACGACGAGAGTACATGTTTGAAGTGACTGGTTCGAAACACT 419 Query 79124 CATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTAT 79183 |||| | || | |||||| | ||||| || |||||||| || |||| |||| | Sbjct 420 CATTGTACCCAAGAATTTGGGATGTTGAAGCGGTTGGCATTGGGGCCATGGTTAAAGAGT 479 Query 79184 TTCTAAGACCGTATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACG 79243 |||| | || | | || | | || | || ||||||||||| | || | | Sbjct 480 TTCTTAACCCATGTTTCACAATGTCCTTCTTCAAAGTGTCCCAATCCCACATGCCAAATG 539 Query 79244 GGACAACATTCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTATG 79303 | | ||||||| | || | |||| |||||| ||| || || ||| | | Sbjct 540 GCTTAGCATTCCACATGTCGAACTGTAAAATACCCTTAGAGGCAGGAGAGCCTTCAAAAG 599 Query 79304 TTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAAA 79363 | ||| |||||||||| ||||| |||||| || || | | | | |||| Sbjct 600 TGGAATATTTACCTTCCTTTTGAGCTAACTCACAAGAAGCTTCAAGGGTAGCATGGTAAA 659 Query 79364 TGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTTA 79423 | ||||||||||| | ||||| || ||| |||| | | |||||||| || | Sbjct 660 TAGTTTCGAAAATTTGTTTATTAAGTATTTGAGCTTTTTCACATTCAAATGGTAAACGCA 719 Query 79424 AGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 79483 | ||| | | || || || |||||||| || | | |||||||||||| || | | Sbjct 720 GCATCATATAAGTATCGGCCAAACCTTGAACCCCCAGGGCAATAGGTCTATGTTTCATGT 779 Query 79484 TAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCC 79543 |||| || ||| ||||| | |||||||| ||| || || | | |||| | || Sbjct 780 TAGAGTTTCTAGCCTCTGGCACTGGATAATAGTTACGGTCGATGACTCTATTCAAGTTA- 838 Query 79544 TGACT-ATTACTTTGACCACATCCTTTAG--TTTGAGAAAATCAAAT----CGT----CC 79592 ||| | || ||||| | | || | || |||| |||| | | ||| || Sbjct 839 TGAGTGATGACTTTAGCAATGTCATGTAAACTTTG-GAAATTGTAGGTCGCCGTTTTACC 897 Query 79593 ATCT-----ATTACAAAC--ATGTTC--AACGCGACAGATGCCAGATTACAAACGGCTAC 79643 |||| | | ||| ||| | | || | || || | ||||||||| || Sbjct 898 ATCTTCCGAAGTCTCAACGAATGCTGGTAGAGCAATGGAAGCTAAATTACAAACAGCAGT 957 Query 79644 CTCATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCC 79703 |||| | | ||| | | ||||| || | ||| | || ||||| || Sbjct 958 TTCATCTGGGGAAGAATACTCGACGATTTCGCAACACAAGTTTGACGATTTGATGGTACC 1017 Query 79704 TAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACC 79763 | || ||||| || ||||| ||||||| ||||||||||||| ||||| || ||||| Sbjct 1018 CAGGTTCTGTTGGTTGGTCTTTCTGTTACAGGCATCCTTATAAACCATGAAGGGTGTACC 1077 Query 79764 AGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGACTT 79823 ||||| | || | || | || || | ||| || | ||||||| || || Sbjct 1078 GGTTTCTGTTTGTGCTTGCAAGATGGCGTACCATACCTTTTGAGCCTTGAT-----GGTT 1132 Query 79824 GTATCTC--TTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACA 79881 || | | |||||||||||| | ||||||| |||||| || || |||||||| Sbjct 1133 TTACCACGACCTTCTCTTTCGTAACGGGTATATAGCTCTTCGAATTCTTCACCCCAAACG 1192 Query 79882 TCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACT 79941 ||||| || || || | || | | || | ||| | ||||| || | || Sbjct 1193 TCGTCCAAACCTGGGGCAGCACTTGGTGAGAATAAGGTCCAGGCCCCATCCTCTTCGACA 1252 Query 79942 CGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCC 80001 || ||||| || ||||| |||||||| ||||| || | |||||| | | | || Sbjct 1253 CGCTTCATGAAAAGATCGGGAATCCATAGAGCAGGGAACAAATCTCTTGCACGAATTTCT 1312 Query 80002 TCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCC 80061 || || || | ||||| | | ||||| || | | || || | |||||| || ||| Sbjct 1313 TCCTTACCATGAGTCTTTCTGATATCGACAAAGTCGAAGATGTCTGCATGCCATGGCTCC 1372 Query 80062 AAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTG 80121 ||| | | ||| | | || |||| ||||| || || || || | ||| | || ||| Sbjct 1373 AAGAAAAGGGCAAAGGCACCGGGTCTCTTGTTACCACCTTGGTCCACGTAACGTGCAGTG 1432 Query 80122 TTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATA 80181 || || | || | | ||| ||||| | || || || ||||| ||||| || | ||| Sbjct 1433 TTGTTGAAGACACGGATCATGGGAATCAACCCGTTTGAAGTACCGTTGGTACCTGCAATA 1492 Query 80182 TAGCTTCCACTGGCACGAATATTACTAAT-TGATAGACCTATTCCCCCTGCCATTTTAGA 80240 || || ||| ||||||||| | || ||| ||||| | || ||||| | || || Sbjct 1493 TAAGAGCCTGTGGAACGAATATTGTTGATATGA-AGACCAACACCACCTGCAGTCTTGGA 1551 Query 80241 GATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTT 80300 || | || || ||| || || || || || || || ||| || || ||||| Sbjct 1552 AATCATGGCACACTCTTTCAAAGTGTCGTAAATACCTTCAATGGAGTCGTCCTTCATGGC 1611 Query 80301 AAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGA 80360 || || ||||| ||||||||| || | || || |||||||||| || || || Sbjct 1612 AATCAGGAAACAAGAAGACATTTGAGGATGTGGCGTACCGGCATTAAATAGTGTGGGGGA 1671 Query 80361 AGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATC 80420 |||||| || || || | |||| | ||||| |||| | | || || ||||| Sbjct 1672 AGCGTGGGTGAAGTATCTCAACGACATCAAGTTGTAAGTCTTCAGCACGGACTCGATATC 1731 Query 80421 CCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTT 80480 | ||||| |||| || |||||||| | || || || || | ||| | | | Sbjct 1732 GCTGCCGTGAATACCTAGGGCCACACGCATGACCAAATGTTGGGGACGTTCGGCCACTTC 1791 Query 80481 GTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--T 80538 | || | | | || || ||| ||||| ||| ||||| ||||||||| |||| | Sbjct 1792 ACCGTCTAGTCTTAGCAGGT-AGAACGTTCCAGAGTCTTAAACCCAAAATAGGTGTACTT 1850 Query 80539 GAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACA 80598 |||| |||| ||||| | || ||||||| || |||| || | || | || | | Sbjct 1851 GAAA--TCTCTGTCGTACACGATGGCCGAGTTCAGCGTATCTTTGTTTTCCATGACAATA 1908 Query 80599 TCCATGGTGA-TACTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAG 80655 | || || | | | ||||| || || | ||| ||||| | ||| || || || Sbjct 1909 T---TGTAGACTTCATCCGAAATCATAGGGGCATGCTTCCCCGTGGCAGGGTTGACCCAG 1965 Query 80656 TTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGAT 80715 | | || ||||| || || | || | ||| | || | ||| |||| || || Sbjct 1966 TCGTGCAAGTCCTCAATGACCTTGGAGAACTGCTTTGTGGTCTGCTTATGTAAGTTGGAG 2025 Query 80716 ACGGCTATTCTGGCGGCTAAAATGGCATAATCTGGATGTTGTGTAGTACAAGT-GGCTGC 80774 | ||| ||||| ||||| || |||| ||||| || || || || || || || Sbjct 2026 ATGGCAATTCTAGCGGCCAACGTGGCGTAATCAGGGTGCACCGTGGT-CATGTATGCACA 2084 Query 80775 TATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCC 80816 | | ||||| ||||| |||||| ||| || || || || || Sbjct 2085 TGTCTCGGCAGCCAGGTTGTCCAGTTCGACGGTGGTGACACC 2126 >seq2084 Length=1521 Score = 134 bits (148), Expect = 2e-26 Identities = 384/588 (65%), Gaps = 8/588 (1%) Strand=Plus/Minus Query 49951 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 50010 |||| |||||| || || ||| ||||| ||| |||||||| | || ||||||||||| Sbjct 931 AACAACAAACAGGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAGATCAGTTCGTTGGAG 872 Query 50011 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCA 50070 || || | |||||||| | || | || || | ||| || ||||| || || ||||| Sbjct 871 AAGGTCAAACCGGGCATCATACCTCTTTTCTTCAACCAGAAGATGGAGGCGAAGGACCCG 812 Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG----C 50126 |||||||||| ||||| | | ||| || || || ||||| || || ||| || | Sbjct 811 GAAAAGAAGACACCTTCGATGGAGGCGAACGCGACCAGTCTTTCACC-GAACAGGGCATC 753 Query 50127 GCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTC 50186 | ||| || ||||| | | ||||| |||||||||| | || || || || Sbjct 752 GGCGTCCTGGATCCATCTAAGGGCCCATTCGGCCTTCTCGCAGATTTCTGGGATGGTGTC 693 Query 50187 TATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAG 50246 ||||| || || | | | |||| || || || | || || |||||||| | Sbjct 692 GATGGCGTTGAACAAGAACTCGCTTTCCTTGGGGTCCTTGATGTAGGTGTCGATCAACAA 633 Query 50247 ACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGC 50306 || |||| || || ||||| || || || ||||| || |||||||||| | || Sbjct 632 GGAGTAGGTTTCGGAGTGGATGTTCTCGATTGCGATCTGGAACCCGTAGAAACTCTTGGC 573 Query 50307 CTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTC 50366 ||| | ||||| || || || | || || | || ||||| || || || ||||| Sbjct 572 CTCCGGGATCTGGACCTCGGTGGAGAAGTTCTCGACCAAGTTTTCGTTGACGATACCGTC 513 Query 50367 ACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTT---GGGTGTTAG 50423 ||| || || || || | || || || | ||||||| | || Sbjct 512 GGAGGCGGCGAAGAAGGCAAGCACTCTGGAGATGAAGAATCTTTCGTTTTCGTTCATTCT 453 Query 50424 TTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGC 50483 || ||||| || | ||| || || || | || | ||| || | ||||| || || || Sbjct 452 GTTGTTCCAGTCGTGGATGTCCTTGGACAAGTCGATTTCCTCGGCAGTCCAGAAGGAGGC 393 Query 50484 CTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAA 50531 ||| || || ||| | |||||| || || || ||||| ||||| Sbjct 392 CTCGGCACGCTTGTACGATTGCCAGATCTCGTGGTACTGGATGGGGAA 345 >seq3120 Length=488 Score = 123 bits (136), Expect = 4e-23 Identities = 314/470 (67%), Gaps = 6/470 (1%) Strand=Plus/Plus Query 80116 GCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCG 80175 || ||||| || | || | | ||| ||||| | || || || || || || || || Sbjct 1 GCAGTGTTGTTGAAGACACGGATCATAGGAATTAACCCGTTAGAAGTCCCGTTCGTACCA 60 Query 80176 GAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATT 80235 | || || || | |||||||| || ||| |||||| || || || || || Sbjct 61 GCAATGTAAGAGCCGGTTGCACGAATGTTGTGAATATGTAGACCAATACCACCAGCAGTT 120 Query 80236 TTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATC 80295 || || || || || ||| || || || || ||||| || || ||| |||||| || Sbjct 121 TTGGAAATCAAAGCACATTCCTTCAAAGTGTCGTAGATACCTTCAATGGAATCATCCTTC 180 Query 80296 ATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTA 80355 || || ||| |||||| |||||||| | || || || || ||||| || Sbjct 181 ATTGCAACTAGGAAACAGGAGGACATTTGAGGCTTTGGTGTACCAGCGTTGAATAAAGTT 240 Query 80356 GGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCT 80415 ||||| ||||| ||||| ||||| |||| | || || || || | ||| | || Sbjct 241 GGAGAGGCGTGAGTAAAGTATTTTAGGGACATCAAGTTATAGGTTTCTAGAGCGGCCTCA 300 Query 80416 ATATCC-CATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAAC 80474 || | || | ||||| |||| ||||| | ||| | | ||| || || | |||| | Sbjct 301 ATGTTATCACCG-TGAATACCTAAGGCGACTCTCATGATTAAGTGTTGTGGACGTTCAGC 359 Query 80475 GATCTTGTTATTT-ATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGT 80533 | |||| || | | |||| ||||| || ||| |||||||||||||| || || Sbjct 360 AA-CTTGACCGTTGACTCTCAATAAGTACGAACGTTCTAAAGTTTTAAAACCGAAGTAAC 418 Query 80534 TGTA-TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTT 80582 |||| |||||| |||| || || | |||| | ||||| ||||||||||| Sbjct 419 TGTACTGAAAA-TCTCTGTCATAGACAATAGCTGAGTTTAGTTTATCCTT 467 >seq2589 Length=927 Score = 95.1 bits (104), Expect = 2e-14 Identities = 304/470 (65%), Gaps = 4/470 (1%) Strand=Plus/Minus Query 79051 GGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATAT 79110 ||||| || ||||||||||| ||||| | || | |||| ||| || || ||| | Sbjct 918 GGATTGACGACTTGAAATTCACCAGATAGAACACGACGAGAGTACATGTTGGAAGTAACT 859 Query 79111 GGTTCCACCGATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCC 79170 ||||| | | || || | || ||||| || | ||| ||||| || |||||||||||| Sbjct 858 GGTTCGAAACACTCGTTGTAACCTAAAATCTGGGAAGTGGATGCAGTAGGCATAGGTGCC 799 Query 79171 ACCAATAAACTATTTCTAAGACCGTATGATC--TGATTTTATCTTTTAGAGATTCCCAAT 79228 | ||| ||||||| ||| ||| | |||| | || | | | || ||||||| Sbjct 798 ATGGTCAAAGAGTTTCTAACACC--ATGCTTCATGATGTCATTTCTCAAAGTATCCCAAT 741 Query 79229 CCCAAAGATCAGACGGGACAACATTCCAAAGATCATATTGTAGAATACCGTTACTAGCGT 79288 |||| | | | | || | | ||| | || |||| || ||||| | | ||| Sbjct 740 CCCACATACCGTAAGGTTTTTCGTCCCACATGTCGAATTGAAGTATACCTTGAGAAGCTG 681 Query 79289 ATGATCCTGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTA 79348 || ||| | | ||||| || || || || ||| |||| |||||| || || | Sbjct 680 GAGAGCCTTGGAAGGTTTCGTATGGGCCATCTCTTTGAGCTAGCTCACAAGAGGCTTCCA 621 Query 79349 ATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTAT 79408 | | | || |||||||| || || | |||| || |||||||| | | Sbjct 620 TGGAAGCATGGTACATGGTTTCAAAGATTTGTATATTTAGTAAGCGTGCTTCTTCGGAGT 561 Query 79409 CAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAG 79468 | ||||| || || | || || | ||| || || ||||| ||||| | | | || | Sbjct 560 CGAATGGTAAACGCAACAACATGAAAGTGTCAGCCAAACCTTGGACACCCAAAGCAATCG 501 Query 79469 GTCTATGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTA 79518 | || |||||| ||||||| || ||||| | ||||||||| ||| Sbjct 500 GCCTGTGTCTCATATTAGATCTTCTTGCTTCCTCGACAGGATAATAGTTA 451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718233021235400