Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F000732305.1_202014-07-21]
3,985 sequences; 11,595,011 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq1567 242 5e-59
seq2084 134 2e-26
seq3120 123 4e-23
seq2589 95.1 2e-14
>seq1567
Length=2367
Score = 242 bits (268), Expect = 5e-59
Identities = 1359/2142 (63%), Gaps = 60/2142 (3%)
Strand=Plus/Plus
Query 78714 CAATG-TGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 78772
||||| | |||||||||| || || |||| || || | | |||||||| ||||| |
Sbjct 6 CAATGGTAAATTGAATGGCTGCAGAAGCGGCTTGTGTTCTCAAGTAGTACATACCCGTCT 65
Query 78773 TTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGA-ATAACTCG-GATC 78830
| | ||| |||| ||||||||||||||||| || | ||| || | | |||
Sbjct 66 TCAAACCCTTCTTCCAACCGTAGAAATGCATACTTGTAATTTTACCCATTGATGGTGAT- 124
Query 78831 TGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCAT 78890
|| || | ||||| || || |||||| ||| | | || ||||||||
Sbjct 125 TG-TAGGAACAAATTCAAGGAGTGGGATTGATCAATGTAAATGGAACGATCAGCAGCCAT 183
Query 78891 TTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTC 78950
|| || || |||||||| | |||||||| | ||||||||| | || | |||||
Sbjct 184 GTTGATAATAGTCTTTTGAGAGATTTCCCAGACAGTTTTATATAGATCTTTCAAATCTTG 243
Query 78951 TGGAAGGTTTGT---ATTCTGAATGGATCCACCATCTGCCATAATCC--TATTCTTGATC 79005
|||| ||||| || | |||||| ||| | | ||||| |||| ||
Sbjct 244 AGGAACGTTTGGTAAATCTTTAATGGAGCCATTTTGAG---TAATCAAATATTGTTTCAT 300
Query 79006 TCT-TCATTCCATAATTTTCTC-TCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTT 79063
|| |||| ||| ||| | ||| |||| | | || | | ||||| || ||||
Sbjct 301 ACTATCATCCCA-AATGCCCAGATCGACTAAATCACGTAGTAAGTATGGATTGACGACTT 359
Query 79064 GAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATT 79123
| ||||| ||||| || || | |||| ||| || || || |||||| | | |
Sbjct 360 GGAATTCACCAGATAAGACACGACGAGAGTACATGTTTGAAGTGACTGGTTCGAAACACT 419
Query 79124 CATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTAT 79183
|||| | || | |||||| | ||||| || |||||||| || |||| |||| |
Sbjct 420 CATTGTACCCAAGAATTTGGGATGTTGAAGCGGTTGGCATTGGGGCCATGGTTAAAGAGT 479
Query 79184 TTCTAAGACCGTATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACG 79243
|||| | || | | || | | || | || ||||||||||| | || | |
Sbjct 480 TTCTTAACCCATGTTTCACAATGTCCTTCTTCAAAGTGTCCCAATCCCACATGCCAAATG 539
Query 79244 GGACAACATTCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTATG 79303
| | ||||||| | || | |||| |||||| ||| || || ||| | |
Sbjct 540 GCTTAGCATTCCACATGTCGAACTGTAAAATACCCTTAGAGGCAGGAGAGCCTTCAAAAG 599
Query 79304 TTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAAA 79363
| ||| |||||||||| ||||| |||||| || || | | | | ||||
Sbjct 600 TGGAATATTTACCTTCCTTTTGAGCTAACTCACAAGAAGCTTCAAGGGTAGCATGGTAAA 659
Query 79364 TGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTTA 79423
| ||||||||||| | ||||| || ||| |||| | | |||||||| || |
Sbjct 660 TAGTTTCGAAAATTTGTTTATTAAGTATTTGAGCTTTTTCACATTCAAATGGTAAACGCA 719
Query 79424 AGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 79483
| ||| | | || || || |||||||| || | | |||||||||||| || | |
Sbjct 720 GCATCATATAAGTATCGGCCAAACCTTGAACCCCCAGGGCAATAGGTCTATGTTTCATGT 779
Query 79484 TAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCC 79543
|||| || ||| ||||| | |||||||| ||| || || | | |||| | ||
Sbjct 780 TAGAGTTTCTAGCCTCTGGCACTGGATAATAGTTACGGTCGATGACTCTATTCAAGTTA- 838
Query 79544 TGACT-ATTACTTTGACCACATCCTTTAG--TTTGAGAAAATCAAAT----CGT----CC 79592
||| | || ||||| | | || | || |||| |||| | | ||| ||
Sbjct 839 TGAGTGATGACTTTAGCAATGTCATGTAAACTTTG-GAAATTGTAGGTCGCCGTTTTACC 897
Query 79593 ATCT-----ATTACAAAC--ATGTTC--AACGCGACAGATGCCAGATTACAAACGGCTAC 79643
|||| | | ||| ||| | | || | || || | ||||||||| ||
Sbjct 898 ATCTTCCGAAGTCTCAACGAATGCTGGTAGAGCAATGGAAGCTAAATTACAAACAGCAGT 957
Query 79644 CTCATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCC 79703
|||| | | ||| | | ||||| || | ||| | || ||||| ||
Sbjct 958 TTCATCTGGGGAAGAATACTCGACGATTTCGCAACACAAGTTTGACGATTTGATGGTACC 1017
Query 79704 TAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACC 79763
| || ||||| || ||||| ||||||| ||||||||||||| ||||| || |||||
Sbjct 1018 CAGGTTCTGTTGGTTGGTCTTTCTGTTACAGGCATCCTTATAAACCATGAAGGGTGTACC 1077
Query 79764 AGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGACTT 79823
||||| | || | || | || || | ||| || | ||||||| || ||
Sbjct 1078 GGTTTCTGTTTGTGCTTGCAAGATGGCGTACCATACCTTTTGAGCCTTGAT-----GGTT 1132
Query 79824 GTATCTC--TTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACA 79881
|| | | |||||||||||| | ||||||| |||||| || || ||||||||
Sbjct 1133 TTACCACGACCTTCTCTTTCGTAACGGGTATATAGCTCTTCGAATTCTTCACCCCAAACG 1192
Query 79882 TCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACT 79941
||||| || || || | || | | || | ||| | ||||| || | ||
Sbjct 1193 TCGTCCAAACCTGGGGCAGCACTTGGTGAGAATAAGGTCCAGGCCCCATCCTCTTCGACA 1252
Query 79942 CGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCC 80001
|| ||||| || ||||| |||||||| ||||| || | |||||| | | | ||
Sbjct 1253 CGCTTCATGAAAAGATCGGGAATCCATAGAGCAGGGAACAAATCTCTTGCACGAATTTCT 1312
Query 80002 TCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCC 80061
|| || || | ||||| | | ||||| || | | || || | |||||| || |||
Sbjct 1313 TCCTTACCATGAGTCTTTCTGATATCGACAAAGTCGAAGATGTCTGCATGCCATGGCTCC 1372
Query 80062 AAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTG 80121
||| | | ||| | | || |||| ||||| || || || || | ||| | || |||
Sbjct 1373 AAGAAAAGGGCAAAGGCACCGGGTCTCTTGTTACCACCTTGGTCCACGTAACGTGCAGTG 1432
Query 80122 TTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATA 80181
|| || | || | | ||| ||||| | || || || ||||| ||||| || | |||
Sbjct 1433 TTGTTGAAGACACGGATCATGGGAATCAACCCGTTTGAAGTACCGTTGGTACCTGCAATA 1492
Query 80182 TAGCTTCCACTGGCACGAATATTACTAAT-TGATAGACCTATTCCCCCTGCCATTTTAGA 80240
|| || ||| ||||||||| | || ||| ||||| | || ||||| | || ||
Sbjct 1493 TAAGAGCCTGTGGAACGAATATTGTTGATATGA-AGACCAACACCACCTGCAGTCTTGGA 1551
Query 80241 GATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTT 80300
|| | || || ||| || || || || || || || ||| || || |||||
Sbjct 1552 AATCATGGCACACTCTTTCAAAGTGTCGTAAATACCTTCAATGGAGTCGTCCTTCATGGC 1611
Query 80301 AAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGA 80360
|| || ||||| ||||||||| || | || || |||||||||| || || ||
Sbjct 1612 AATCAGGAAACAAGAAGACATTTGAGGATGTGGCGTACCGGCATTAAATAGTGTGGGGGA 1671
Query 80361 AGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATC 80420
|||||| || || || | |||| | ||||| |||| | | || || |||||
Sbjct 1672 AGCGTGGGTGAAGTATCTCAACGACATCAAGTTGTAAGTCTTCAGCACGGACTCGATATC 1731
Query 80421 CCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTT 80480
| ||||| |||| || |||||||| | || || || || | ||| | | |
Sbjct 1732 GCTGCCGTGAATACCTAGGGCCACACGCATGACCAAATGTTGGGGACGTTCGGCCACTTC 1791
Query 80481 GTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--T 80538
| || | | | || || ||| ||||| ||| ||||| ||||||||| |||| |
Sbjct 1792 ACCGTCTAGTCTTAGCAGGT-AGAACGTTCCAGAGTCTTAAACCCAAAATAGGTGTACTT 1850
Query 80539 GAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACA 80598
|||| |||| ||||| | || ||||||| || |||| || | || | || | |
Sbjct 1851 GAAA--TCTCTGTCGTACACGATGGCCGAGTTCAGCGTATCTTTGTTTTCCATGACAATA 1908
Query 80599 TCCATGGTGA-TACTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAG 80655
| || || | | | ||||| || || | ||| ||||| | ||| || || ||
Sbjct 1909 T---TGTAGACTTCATCCGAAATCATAGGGGCATGCTTCCCCGTGGCAGGGTTGACCCAG 1965
Query 80656 TTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGAT 80715
| | || ||||| || || | || | ||| | || | ||| |||| || ||
Sbjct 1966 TCGTGCAAGTCCTCAATGACCTTGGAGAACTGCTTTGTGGTCTGCTTATGTAAGTTGGAG 2025
Query 80716 ACGGCTATTCTGGCGGCTAAAATGGCATAATCTGGATGTTGTGTAGTACAAGT-GGCTGC 80774
| ||| ||||| ||||| || |||| ||||| || || || || || || ||
Sbjct 2026 ATGGCAATTCTAGCGGCCAACGTGGCGTAATCAGGGTGCACCGTGGT-CATGTATGCACA 2084
Query 80775 TATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCC 80816
| | ||||| ||||| |||||| ||| || || || || ||
Sbjct 2085 TGTCTCGGCAGCCAGGTTGTCCAGTTCGACGGTGGTGACACC 2126
>seq2084
Length=1521
Score = 134 bits (148), Expect = 2e-26
Identities = 384/588 (65%), Gaps = 8/588 (1%)
Strand=Plus/Minus
Query 49951 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 50010
|||| |||||| || || ||| ||||| ||| |||||||| | || |||||||||||
Sbjct 931 AACAACAAACAGGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAGATCAGTTCGTTGGAG 872
Query 50011 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCA 50070
|| || | |||||||| | || | || || | ||| || ||||| || || |||||
Sbjct 871 AAGGTCAAACCGGGCATCATACCTCTTTTCTTCAACCAGAAGATGGAGGCGAAGGACCCG 812
Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG----C 50126
|||||||||| ||||| | | ||| || || || ||||| || || ||| || |
Sbjct 811 GAAAAGAAGACACCTTCGATGGAGGCGAACGCGACCAGTCTTTCACC-GAACAGGGCATC 753
Query 50127 GCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTC 50186
| ||| || ||||| | | ||||| |||||||||| | || || || ||
Sbjct 752 GGCGTCCTGGATCCATCTAAGGGCCCATTCGGCCTTCTCGCAGATTTCTGGGATGGTGTC 693
Query 50187 TATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAG 50246
||||| || || | | | |||| || || || | || || |||||||| |
Sbjct 692 GATGGCGTTGAACAAGAACTCGCTTTCCTTGGGGTCCTTGATGTAGGTGTCGATCAACAA 633
Query 50247 ACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGC 50306
|| |||| || || ||||| || || || ||||| || |||||||||| | ||
Sbjct 632 GGAGTAGGTTTCGGAGTGGATGTTCTCGATTGCGATCTGGAACCCGTAGAAACTCTTGGC 573
Query 50307 CTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTC 50366
||| | ||||| || || || | || || | || ||||| || || || |||||
Sbjct 572 CTCCGGGATCTGGACCTCGGTGGAGAAGTTCTCGACCAAGTTTTCGTTGACGATACCGTC 513
Query 50367 ACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTT---GGGTGTTAG 50423
||| || || || || | || || || | ||||||| | ||
Sbjct 512 GGAGGCGGCGAAGAAGGCAAGCACTCTGGAGATGAAGAATCTTTCGTTTTCGTTCATTCT 453
Query 50424 TTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGC 50483
|| ||||| || | ||| || || || | || | ||| || | ||||| || || ||
Sbjct 452 GTTGTTCCAGTCGTGGATGTCCTTGGACAAGTCGATTTCCTCGGCAGTCCAGAAGGAGGC 393
Query 50484 CTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAA 50531
||| || || ||| | |||||| || || || ||||| |||||
Sbjct 392 CTCGGCACGCTTGTACGATTGCCAGATCTCGTGGTACTGGATGGGGAA 345
>seq3120
Length=488
Score = 123 bits (136), Expect = 4e-23
Identities = 314/470 (67%), Gaps = 6/470 (1%)
Strand=Plus/Plus
Query 80116 GCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCG 80175
|| ||||| || | || | | ||| ||||| | || || || || || || || ||
Sbjct 1 GCAGTGTTGTTGAAGACACGGATCATAGGAATTAACCCGTTAGAAGTCCCGTTCGTACCA 60
Query 80176 GAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATT 80235
| || || || | |||||||| || ||| |||||| || || || || ||
Sbjct 61 GCAATGTAAGAGCCGGTTGCACGAATGTTGTGAATATGTAGACCAATACCACCAGCAGTT 120
Query 80236 TTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATC 80295
|| || || || || ||| || || || || ||||| || || ||| |||||| ||
Sbjct 121 TTGGAAATCAAAGCACATTCCTTCAAAGTGTCGTAGATACCTTCAATGGAATCATCCTTC 180
Query 80296 ATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTA 80355
|| || ||| |||||| |||||||| | || || || || ||||| ||
Sbjct 181 ATTGCAACTAGGAAACAGGAGGACATTTGAGGCTTTGGTGTACCAGCGTTGAATAAAGTT 240
Query 80356 GGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCT 80415
||||| ||||| ||||| ||||| |||| | || || || || | ||| | ||
Sbjct 241 GGAGAGGCGTGAGTAAAGTATTTTAGGGACATCAAGTTATAGGTTTCTAGAGCGGCCTCA 300
Query 80416 ATATCC-CATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAAC 80474
|| | || | ||||| |||| ||||| | ||| | | ||| || || | |||| |
Sbjct 301 ATGTTATCACCG-TGAATACCTAAGGCGACTCTCATGATTAAGTGTTGTGGACGTTCAGC 359
Query 80475 GATCTTGTTATTT-ATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGT 80533
| |||| || | | |||| ||||| || ||| |||||||||||||| || ||
Sbjct 360 AA-CTTGACCGTTGACTCTCAATAAGTACGAACGTTCTAAAGTTTTAAAACCGAAGTAAC 418
Query 80534 TGTA-TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTT 80582
|||| |||||| |||| || || | |||| | ||||| |||||||||||
Sbjct 419 TGTACTGAAAA-TCTCTGTCATAGACAATAGCTGAGTTTAGTTTATCCTT 467
>seq2589
Length=927
Score = 95.1 bits (104), Expect = 2e-14
Identities = 304/470 (65%), Gaps = 4/470 (1%)
Strand=Plus/Minus
Query 79051 GGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATAT 79110
||||| || ||||||||||| ||||| | || | |||| ||| || || ||| |
Sbjct 918 GGATTGACGACTTGAAATTCACCAGATAGAACACGACGAGAGTACATGTTGGAAGTAACT 859
Query 79111 GGTTCCACCGATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCC 79170
||||| | | || || | || ||||| || | ||| ||||| || ||||||||||||
Sbjct 858 GGTTCGAAACACTCGTTGTAACCTAAAATCTGGGAAGTGGATGCAGTAGGCATAGGTGCC 799
Query 79171 ACCAATAAACTATTTCTAAGACCGTATGATC--TGATTTTATCTTTTAGAGATTCCCAAT 79228
| ||| ||||||| ||| ||| | |||| | || | | | || |||||||
Sbjct 798 ATGGTCAAAGAGTTTCTAACACC--ATGCTTCATGATGTCATTTCTCAAAGTATCCCAAT 741
Query 79229 CCCAAAGATCAGACGGGACAACATTCCAAAGATCATATTGTAGAATACCGTTACTAGCGT 79288
|||| | | | | || | | ||| | || |||| || ||||| | | |||
Sbjct 740 CCCACATACCGTAAGGTTTTTCGTCCCACATGTCGAATTGAAGTATACCTTGAGAAGCTG 681
Query 79289 ATGATCCTGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTA 79348
|| ||| | | ||||| || || || || ||| |||| |||||| || || |
Sbjct 680 GAGAGCCTTGGAAGGTTTCGTATGGGCCATCTCTTTGAGCTAGCTCACAAGAGGCTTCCA 621
Query 79349 ATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTAT 79408
| | | || |||||||| || || | |||| || |||||||| | |
Sbjct 620 TGGAAGCATGGTACATGGTTTCAAAGATTTGTATATTTAGTAAGCGTGCTTCTTCGGAGT 561
Query 79409 CAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAG 79468
| ||||| || || | || || | ||| || || ||||| ||||| | | | || |
Sbjct 560 CGAATGGTAAACGCAACAACATGAAAGTGTCAGCCAAACCTTGGACACCCAAAGCAATCG 501
Query 79469 GTCTATGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTA 79518
| || |||||| ||||||| || ||||| | ||||||||| |||
Sbjct 500 GCCTGTGTCTCATATTAGATCTTCTTGCTTCCTCGACAGGATAATAGTTA 451
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718233021235400
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