Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F000732305.1_202014-07-21]
3,985 sequences; 11,595,011 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq1567 203 4e-47
seq3120 116 5e-21
seq3620 84.2 3e-11
>seq1567
Length=2367
Score = 203 bits (224), Expect = 4e-47
Identities = 692/1068 (65%), Gaps = 18/1068 (2%)
Strand=Plus/Plus
Query 71776 TTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATA 71835
|||||||| || | || ||||| || ||||| ||||||| ||||||||||||| ||
Sbjct 1007 TTGATGGTACCCAGGTTCTGTTGGTTGGTCTTTCTGTTACAGGCATCCTTATAAACCATG 1066
Query 71836 AACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTT 71895
|| || ||||| ||||| | || | || | || || | ||| || | |||||||
Sbjct 1067 AAGGGTGTACCGGTTTCTGTTTGTGCTTGCAAGATGGCGTACCATACCTTTTGAGCCTTG 1126
Query 71896 ATTATATT-CTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTC 71954
|| | || | | | |||||||||||| | ||||||| |||||| || ||
Sbjct 1127 ATGGTTTTACCACGACC----TTCTCTTTCGTAACGGGTATATAGCTCTTCGAATTCTTC 1182
Query 71955 TCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATC 72014
|||||| | | ||| || || || || | || | | || | ||| | |||||
Sbjct 1183 ACCCCAAACGTCGTCCAAACCTGGGGCAGCACTTGGTGAGAATAAGGTCCAGGCCCCATC 1242
Query 72015 ATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGT 72074
|| | || || ||||| || ||||| |||||||| ||||| || | |||||| |
Sbjct 1243 CTCTTCGACACGCTTCATGAAAAGATCGGGAATCCATAGAGCAGGGAACAAATCTCTTGC 1302
Query 72075 TCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATG 72134
| | || || || || | ||||| | | ||||| || | | || || | |||
Sbjct 1303 ACGAATTTCTTCCTTACCATGAGTCTTTCTGATATCGACAAAGTCGAAGATGTCTGCATG 1362
Query 72135 CCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTA 72194
||| || |||||| | | ||| | | || || | ||||| || || || || | |||
Sbjct 1363 CCATGGCTCCAAGAAAAGGGCAAAGGCACCGGGTCTCTTGTTACCACCTTGGTCCACGTA 1422
Query 72195 TCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGT 72254
| || ||||| || | || | | ||| ||||| | || || || | ||| |||||
Sbjct 1423 ACGTGCAGTGTTGTTGAAGACACGGATCATGGGAATCAACCCGTTTGAAGTACCGTTGGT 1482
Query 72255 CCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAAT-TGATAGACCTATTCCCCCTG 72313
|| | ||||| || ||| |||||||||| | || ||| ||||| | || ||||
Sbjct 1483 ACCTGCAATATAAGAGCCTGTGGAACGAATATTGTTGATATGA-AGACCAACACCACCTG 1541
Query 72314 CCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCAT 72373
| | || || || | || || ||| || || || || || || || || || |
Sbjct 1542 CAGTCTTGGAAATCATGGCACACTCTTTCAAAGTGTCGTAAATACCTTCAATGGAGTCGT 1601
Query 72374 CCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATA 72433
|| ||||| || || ||||| ||||||||| || | || || ||||||||||
Sbjct 1602 CCTTCATGGCAATCAGGAAACAAGAAGACATTTGAGGATGTGGCGTACCGGCATTAAATA 1661
Query 72434 AGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTG 72493
|| || |||||||| || || || | |||| | ||||| |||| | | |
Sbjct 1662 GTGTGGGGGAAGCGTGGGTGAAGTATCTCAACGACATCAAGTTGTAAGTCTTCAGCACGG 1721
Query 72494 ATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTT 72553
| || ||||| | || || |||| || |||||||| | || ||| || || | ||
Sbjct 1722 ACTCGATATCGCTGCCGTGAATACCTAGGGCCACACGCATGACCAAATGTTGGGGACGTT 1781
Query 72554 CAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAAT 72613
| | | | | || | | | || ||| || ||||| ||| ||||| |||||||
Sbjct 1782 CGGCCACTTCACCGTCTAGTCTTAGCAGGTA-GAACGTTCCAGAGTCTTAAACCCAAAAT 1840
Query 72614 AGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTT 72671
|| |||| ||||| |||| ||||| | || |||| || || |||| || | ||
Sbjct 1841 AGGTGTACTTGAAA--TCTCTGTCGTACACGATGGCCGAGTTCAGCGTATCTTTGTTTTC 1898
Query 72672 GTTAACTATATCCATGGTGA-TACTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGG 72728
| || |||| || || | | | ||||| || || | ||| ||||| | |||
Sbjct 1899 CATGACAATAT---TGTAGACTTCATCCGAAATCATAGGGGCATGCTTCCCCGTGGCAGG 1955
Query 72729 ATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTG 72788
|| || ||| | || ||||| || || | || | ||| | || | ||| ||
Sbjct 1956 GTTGACCCAGTCGTGCAAGTCCTCAATGACCTTGGAGAACTGCTTTGTGGTCTGCTTATG 2015
Query 72789 TAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATG 72836
|| || || | ||| ||||| ||||| | |||| ||||| || ||
Sbjct 2016 TAAGTTGGAGATGGCAATTCTAGCGGCCAACGTGGCGTAATCAGGGTG 2063
>seq3120
Length=488
Score = 116 bits (128), Expect = 5e-21
Identities = 266/394 (68%), Gaps = 10/394 (3%)
Strand=Plus/Plus
Query 72277 GCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCAT 72336
|||||||| ||| ||| |||||| || || || || |||| || || || || |||
Sbjct 79 GCACGAATGTTGTGAATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACAT 138
Query 72337 CGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAG 72396
|| || || || ||||| || || || ||||||| |||| || ||| ||||||
Sbjct 139 TCCTTCAAAGTGTCGTAGATACCTTCAATGGAATCATCCTTCATTGCAACTAGGAAACAG 198
Query 72397 CTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAAC 72456
|||||||| | || || || || ||||| || ||||| ||||| |||||
Sbjct 199 GAGGACATTTGAGGCTTTGGTGTACCAGCGTTGAATAAAGTTGGAGAGGCGTGAGTAAAG 258
Query 72457 CATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTAT---ATCCCATTGATGT 72513
||||| |||| | || || || || | ||| | || || ||| | |||
Sbjct 259 TATTTTAGGGACATCAAGTTATAGGTTTCTAGAGCGGCCTCAATGTTATCACCGTGA--- 315
Query 72514 ATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTT-AT 72572
|| |||| ||||| | ||| | | || || || | |||| | | |||| || |
Sbjct 316 ATACCTAAGGCGACTCTCATGATTAAGTGTTGTGGACGTTCAGCAA-CTTGACCGTTGAC 374
Query 72573 TTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-TGAAAAGTCTC 72631
| |||| ||||| || ||| |||||||||||||| || || |||| |||||| ||||
Sbjct 375 TCTCAATAAGTACGAACGTTCTAAAGTTTTAAAACCGAAGTAACTGTACTGAAAA-TCTC 433
Query 72632 GTTCGTAAATAATAACCGAATTGAGTTTATCCTT 72665
|| || | |||| | || || |||||||||||
Sbjct 434 TGTCATAGACAATAGCTGAGTTTAGTTTATCCTT 467
>seq3620
Length=287
Score = 84.2 bits (92), Expect = 3e-11
Identities = 144/201 (72%), Gaps = 11/201 (5%)
Strand=Plus/Plus
Query 70868 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAGCTAGGATCGGCTATGTGAATA 70926
|||| ||||| ||||||||||| ||||| || || | | || || | |||||
Sbjct 5 TCCAACCGTAGAAATGCATACTTGTTAGCTTACCCATGGTTGGGGCACGCAA---GAATA 61
Query 70927 --TTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCG 70984
|||| || || |||||||||| | | | | ||| || ||||| || ||||| |
Sbjct 62 AATTCAAAGAATGGGATTGATCGATGTAAACGGCACGGTCGGCTGCCATGTTAATGATAG 121
Query 70985 TCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGAAGGTTT 71043
||||||||| ||||||||||| ||| ||||| || || | ||| |||| ||| | ||||
Sbjct 122 TCTTTTGTGAAATTTCCCAAACAGTCTTATACAAATCTTTCAAT-TCTTGTGGTACGTTT 180
Query 71044 -GTATTC--TGAATGGATCCA 71061
||| | |||||||| |||
Sbjct 181 GGTAAACCTTGAATGGAACCA 201
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671105768878600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |