Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F000732305.1_202014-07-21]
3,985 sequences; 11,595,011 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq2084 141 2e-28
>seq2084
Length=1521
Score = 141 bits (156), Expect = 2e-28
Identities = 291/428 (68%), Gaps = 21/428 (5%)
Strand=Plus/Plus
Query 268877 GATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAGGTACAGATTCCTGAA 268936
|| |||||||| |||||||| | || ||||| |||| ||||| ||||| || ||
Sbjct 513 GACGGTATCGTCAACGAAAACTTGGTCGAGAACTTCTCCACCGAGGTCCAGATCCCGGAG 572
Query 268937 GCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGAGATGTACAGT 268996
|||| |||| ||||| |||||||| || || || || || || || || | |||
Sbjct 573 GCCAAGAGTTTCTACGGGTTCCAGATCGCAATCGAGAACATCCACTCCGAAACCTACTCC 632
Query 268997 CTATTAATAGATACTTATATAGATGATAACAACGAAAAGAAAAGACTATTTTCTTCTATG 269056
| || || || || || || | || ||| |||| || | | || ||| | |
Sbjct 633 TTGTTGATCGACACCTACATCAAGGACCCCAAGGAAAGC----GAGT-TCTTGTTCAACG 687
Query 269057 AGA-----ACTAT----GGACTGTGTGAGaaaaaaaTCTGAATGGGCTCTGAAATGGATA 269107
| || || | | | || ||||| | |||||||| || | ||||||
Sbjct 688 CCATCGACACCATCCCAGAAATCTGCGAGAAGG----CCGAATGGGCCCTTAGATGGATC 743
Query 269108 AACGATAGCGCG--CCT-TACGGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATA 269164
| || || ||| | ||| ||||| | || || || ||| | | |||||| |
Sbjct 744 CAGGACGCCGATGCCCTGTTCGGTGAAAGACTGGTCGCGTTCGCCTCCATCGAAGGTGTC 803
Query 269165 TTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGA 269224
|||||||| ||||| || ||| | ||||| ||||||||||||||||| | ||||| ||
Sbjct 804 TTCTTTTCCGGGTCCTTCGCCTCCATCTTCTGGTTGAAGAAAAGAGGTATGATGCCCGGT 863
Query 269225 TTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACACTGCGACTTCGCTTGT 269284
|| || ||||| |||||| |||| |||| ||||||||||| ||| |||||| || |||
Sbjct 864 TTGACCTTCTCCAACGAACTGATCTGCAGAGACGAAGGTTTGCACACCGACTTTGCCTGT 923
Query 269285 TTATTATT 269292
|| || ||
Sbjct 924 TTGTTGTT 931
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151339612116380
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |