Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F000732305.1_202014-07-21] 3,985 sequences; 11,595,011 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq203 96.9 4e-15 seq131 91.5 2e-13 seq761 87.8 2e-12 >seq203 Length=9829 Score = 96.9 bits (106), Expect = 4e-15 Identities = 109/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 19358 CCTGAAATAGGTGATAAGTTTGCTTCTTTTACTGCTCAAAAAGGCACATGTGGTATGATT 19417 ||| |||| ||||| || || |||||| | || |||||| || || |||||| | Sbjct 9123 CCTCAAATCGGTGACAAATTCGCTTCTCGTCATGGTCAAAAGGGTACTATTGGTATCACA 9182 Query 19418 TATCGTCAAGAAGATATGCCTTTTACTAAAGATGGTATAGTGCCGGATCTTATTATTAAC 19477 |||||| |||||||||||| ||||| ||| ||||| || || ||| | ||||| || Sbjct 9183 TATCGTAGAGAAGATATGCCATTTACAGCAGAAGGTATCGTACCAGATTTAATTATCAAT 9242 Query 19478 CCACATGCTTTTCCAAGTCGAATGAC 19503 || |||||| ||||| ||| ||||| Sbjct 9243 CCTCATGCTATTCCATCTCGTATGAC 9268 >seq131 Length=11630 Score = 91.5 bits (100), Expect = 2e-13 Identities = 290/452 (64%), Gaps = 27/452 (6%) Strand=Plus/Minus Query 6810 TTGTTCTTTTATAGCTTTTATATGATCTAAATAAATATGAGCATCTCCTAGCGTATGAAT 6869 |||||| || | |||| | |||||| ||| | ||| ||||| || | |||||||| Sbjct 9348 TTGTTCCTTCAAGGCTTCAACATGATCCTTATACACATGCGCATCCCCCAAAGTATGAAT 9289 Query 6870 AAATTCACCTGGTTTCATATCAACAGCTTGAGCAATTAAATATGTTAATAATGCATAAGA 6929 || ||||| |||| |||||| || ||| |||||| | || || | ||||| || Sbjct 9288 GAACTCACCCGGTTCCATATCGACGACTTTAGCAATCATTCTGGTCAACAGGGCATATGA 9229 Query 6930 AGCTACATTAAAAGGTACACCTAATCCCATATCTGCTGATCTTTG--ATAACAT---TGA 6984 || | |||||| || ||||||| |||||||| || | || |||||| ||| Sbjct 9228 GGCAATATTAAATGGCACACCTAGCCCCATATCACAGGAACGCTGGTATAACAAACATGA 9169 Query 6985 CAAGATAA-------------AATATTGTCTATAG---------CATAAAATTGACACAA 7022 | | | | | | ||| | | ||||||| || | || Sbjct 9168 AAGGCGAGGCTTACCGCTTCCACTTTCCTCTTTGGGGAAACTGACATAAAACTGTGAAAA 9109 Query 7023 TACATGACATGGAGGTAAAACAGCCTGATCTATATCAGATGGATTCCAAGCAGTCATTAA 7082 | ||| ||||| |||||| | || || | ||| | |||||||||||| |||| | Sbjct 9108 AATATGGCATGGTGGTAAAGCCATCTTGTCAAAATCTGCAGGATTCCAAGCACTCATGAT 9049 Query 7083 AATACGTCTATCATTTGGATTTGTTTTTAATTTTGTTATAATTATTTGTAATTGATCTAT 7142 || | |||||| | || |||||||||||||| ||||| | | ||||| || Sbjct 9048 GATCCTTCTATCGTAAGGGTTTGTTTTTAATTTGTGTATAACCTGCTTCAGCTGATCGAT 8989 Query 7143 ACCCTGACCTTCATAATTAGTATGACAATTTATATAATTAGCTCCAAAATGTCTCCATTG 7202 || || || ||| | | || || | | || | || || |||||||||||||| Sbjct 8988 GCCTTGTCCGGTATAGTCATCATCGCACGTCTTGTATTGGGCACCGAAATGTCTCCATTG 8929 Query 7203 AAACCCATAAATAGGACCTAAATCACCTTCTT 7234 |||||||||| || || | || ||| ||| Sbjct 8928 GAACCCATAAACGGGGCCCAGGTCTCCTACTT 8897 >seq761 Length=5004 Score = 87.8 bits (96), Expect = 2e-12 Identities = 195/289 (67%), Gaps = 3/289 (1%) Strand=Plus/Plus Query 164794 GTGGTTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATAATATTTTAATT 164853 || |||||||| | || ||||||| |||||||| || | ||||||||||| | Sbjct 265 GTAGTTAATCAACTACTGGCTAAAATGGATGGTGTTGATCAACTGAATAATATTTTGGTC 324 Query 164854 GTAGGTATGACCAACCGACCTGATTTAATTGATGATGCT-TTATTACGACCTGGTCGATT 164912 ||||||||||||| || ||||| || ||| |||| || ||||| || ||| |||| Sbjct 325 ATAGGTATGACCAATCGTAAAGATTTGATCGATATTGCTCTTTTTACGTCCAGGTAGATT 384 Query 164913 AGAATTGAAAATAGAAATAGGATTACCCGACAAAGAAGGACGCCTTCAAATTTTAAAAGT 164972 ||| | | | ||||| ||||| ||| || |||| | || || ||||| | | Sbjct 385 CGAAGTTCAGGTTGAAATTCATTTACCGGACGAAAAAGGTAGACTGCAGATTTTTGACAT 444 Query 164973 TCATGTGGCTAAAATGAAATCCTGTGATAT-ATTATCTCCCGATGTAGATTTAAATAAAA 165031 ||| | ||||||| | | |||| || | | |||||| | ||| | || Sbjct 445 TCAAACGAAGAAAATGAGAGAAAATAATATGATGAGC-GACGATGTTAACTTAGCTGAAC 503 Query 165032 TAGCTGCCGAAACTAAAAATTATAGTGGTGCTGAATTAGAGGGATTAGT 165080 |||| || |||||| |||| | ||||||||| | || || ||||| Sbjct 504 TAGCAGCTTTAACTAACAATTTTTCCGGTGCTGAAATTGAAGGTTTAGT 552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595842318126000