Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F000732305.1_202014-07-21]
3,985 sequences; 11,595,011 total letters
Query= NC_005902.1
Length=186250
Score E
Sequences producing significant alignments: (Bits) Value
seq203 96.9 4e-15
seq131 91.5 2e-13
seq761 87.8 2e-12
>seq203
Length=9829
Score = 96.9 bits (106), Expect = 4e-15
Identities = 109/146 (75%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 19358 CCTGAAATAGGTGATAAGTTTGCTTCTTTTACTGCTCAAAAAGGCACATGTGGTATGATT 19417
||| |||| ||||| || || |||||| | || |||||| || || |||||| |
Sbjct 9123 CCTCAAATCGGTGACAAATTCGCTTCTCGTCATGGTCAAAAGGGTACTATTGGTATCACA 9182
Query 19418 TATCGTCAAGAAGATATGCCTTTTACTAAAGATGGTATAGTGCCGGATCTTATTATTAAC 19477
|||||| |||||||||||| ||||| ||| ||||| || || ||| | ||||| ||
Sbjct 9183 TATCGTAGAGAAGATATGCCATTTACAGCAGAAGGTATCGTACCAGATTTAATTATCAAT 9242
Query 19478 CCACATGCTTTTCCAAGTCGAATGAC 19503
|| |||||| ||||| ||| |||||
Sbjct 9243 CCTCATGCTATTCCATCTCGTATGAC 9268
>seq131
Length=11630
Score = 91.5 bits (100), Expect = 2e-13
Identities = 290/452 (64%), Gaps = 27/452 (6%)
Strand=Plus/Minus
Query 6810 TTGTTCTTTTATAGCTTTTATATGATCTAAATAAATATGAGCATCTCCTAGCGTATGAAT 6869
|||||| || | |||| | |||||| ||| | ||| ||||| || | ||||||||
Sbjct 9348 TTGTTCCTTCAAGGCTTCAACATGATCCTTATACACATGCGCATCCCCCAAAGTATGAAT 9289
Query 6870 AAATTCACCTGGTTTCATATCAACAGCTTGAGCAATTAAATATGTTAATAATGCATAAGA 6929
|| ||||| |||| |||||| || ||| |||||| | || || | ||||| ||
Sbjct 9288 GAACTCACCCGGTTCCATATCGACGACTTTAGCAATCATTCTGGTCAACAGGGCATATGA 9229
Query 6930 AGCTACATTAAAAGGTACACCTAATCCCATATCTGCTGATCTTTG--ATAACAT---TGA 6984
|| | |||||| || ||||||| |||||||| || | || |||||| |||
Sbjct 9228 GGCAATATTAAATGGCACACCTAGCCCCATATCACAGGAACGCTGGTATAACAAACATGA 9169
Query 6985 CAAGATAA-------------AATATTGTCTATAG---------CATAAAATTGACACAA 7022
| | | | | | ||| | | ||||||| || | ||
Sbjct 9168 AAGGCGAGGCTTACCGCTTCCACTTTCCTCTTTGGGGAAACTGACATAAAACTGTGAAAA 9109
Query 7023 TACATGACATGGAGGTAAAACAGCCTGATCTATATCAGATGGATTCCAAGCAGTCATTAA 7082
| ||| ||||| |||||| | || || | ||| | |||||||||||| |||| |
Sbjct 9108 AATATGGCATGGTGGTAAAGCCATCTTGTCAAAATCTGCAGGATTCCAAGCACTCATGAT 9049
Query 7083 AATACGTCTATCATTTGGATTTGTTTTTAATTTTGTTATAATTATTTGTAATTGATCTAT 7142
|| | |||||| | || |||||||||||||| ||||| | | ||||| ||
Sbjct 9048 GATCCTTCTATCGTAAGGGTTTGTTTTTAATTTGTGTATAACCTGCTTCAGCTGATCGAT 8989
Query 7143 ACCCTGACCTTCATAATTAGTATGACAATTTATATAATTAGCTCCAAAATGTCTCCATTG 7202
|| || || ||| | | || || | | || | || || ||||||||||||||
Sbjct 8988 GCCTTGTCCGGTATAGTCATCATCGCACGTCTTGTATTGGGCACCGAAATGTCTCCATTG 8929
Query 7203 AAACCCATAAATAGGACCTAAATCACCTTCTT 7234
|||||||||| || || | || ||| |||
Sbjct 8928 GAACCCATAAACGGGGCCCAGGTCTCCTACTT 8897
>seq761
Length=5004
Score = 87.8 bits (96), Expect = 2e-12
Identities = 195/289 (67%), Gaps = 3/289 (1%)
Strand=Plus/Plus
Query 164794 GTGGTTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATAATATTTTAATT 164853
|| |||||||| | || ||||||| |||||||| || | ||||||||||| |
Sbjct 265 GTAGTTAATCAACTACTGGCTAAAATGGATGGTGTTGATCAACTGAATAATATTTTGGTC 324
Query 164854 GTAGGTATGACCAACCGACCTGATTTAATTGATGATGCT-TTATTACGACCTGGTCGATT 164912
||||||||||||| || ||||| || ||| |||| || ||||| || ||| ||||
Sbjct 325 ATAGGTATGACCAATCGTAAAGATTTGATCGATATTGCTCTTTTTACGTCCAGGTAGATT 384
Query 164913 AGAATTGAAAATAGAAATAGGATTACCCGACAAAGAAGGACGCCTTCAAATTTTAAAAGT 164972
||| | | | ||||| ||||| ||| || |||| | || || ||||| | |
Sbjct 385 CGAAGTTCAGGTTGAAATTCATTTACCGGACGAAAAAGGTAGACTGCAGATTTTTGACAT 444
Query 164973 TCATGTGGCTAAAATGAAATCCTGTGATAT-ATTATCTCCCGATGTAGATTTAAATAAAA 165031
||| | ||||||| | | |||| || | | |||||| | ||| | ||
Sbjct 445 TCAAACGAAGAAAATGAGAGAAAATAATATGATGAGC-GACGATGTTAACTTAGCTGAAC 503
Query 165032 TAGCTGCCGAAACTAAAAATTATAGTGGTGCTGAATTAGAGGGATTAGT 165080
|||| || |||||| |||| | ||||||||| | || || |||||
Sbjct 504 TAGCAGCTTTAACTAACAATTTTTCCGGTGCTGAAATTGAAGGTTTAGT 552
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595842318126000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |