Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F000732305.1_202014-07-21]
3,985 sequences; 11,595,011 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq1567 237 2e-57
seq3120 136 5e-27
seq2084 132 6e-26
seq3620 82.4 1e-10
>seq1567
Length=2367
Score = 237 bits (262), Expect = 2e-57
Identities = 741/1133 (65%), Gaps = 22/1133 (2%)
Strand=Plus/Plus
Query 62970 TTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATG 63029
||||| || || | || ||||| || ||||| ||||||| ||||||||||||| |||
Sbjct 1007 TTGATGGTACCCAGGTTCTGTTGGTTGGTCTTTCTGTTACAGGCATCCTTATAAACCATG 1066
Query 63030 AATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTT 63089
|| || ||||| ||||| | || | || | || || | ||| || | |||||||
Sbjct 1067 AAGGGTGTACCGGTTTCTGTTTGTGCTTGCAAGATGGCGTACCATACCTTTTGAGCCTTG 1126
Query 63090 ATTATAGATTTGTATCTC--CTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGT 63147
|| | ||| || | | | |||||||||||| | ||||| | |||||| || |
Sbjct 1127 AT----GGTTT-TACCACGACCTTCTCTTTCGTAACGGGTATATAGCTCTTCGAATTCTT 1181
Query 63148 CTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGT 63207
| |||||||| | |||||| || || || || | | || | ||| | || |
Sbjct 1182 CACCCCAAACGTCGTCCAAACCTGGGGCAGCACTTGGTGAGAATAAGGTCCAGGCCCCAT 1241
Query 63208 CATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGG 63267
| || | || || ||||| || ||||| |||||||| ||||| || | |||||| |
Sbjct 1242 CCTCTTCGACACGCTTCATGAAAAGATCGGGAATCCATAGAGCAGGGAACAAATCTCTTG 1301
Query 63268 TTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAAT 63327
| | ||| || || || | ||||| | | ||||| || | | || || | ||
Sbjct 1302 CACGAATTTCTTCCTTACCATGAGTCTTTCTGATATCGACAAAGTCGAAGATGTCTGCAT 1361
Query 63328 GCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGT 63387
|||| || |||||| | | ||| | | || || | ||||| || || || || | ||
Sbjct 1362 GCCATGGCTCCAAGAAAAGGGCAAAGGCACCGGGTCTCTTGTTACCACCTTGGTCCACGT 1421
Query 63388 ATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGG 63447
| | || ||||| || | || | | ||| ||||| | |||||||| |||| ||||
Sbjct 1422 AACGTGCAGTGTTGTTGAAGACACGGATCATGGGAATCAACCCGTTTGAAGTACCGTTGG 1481
Query 63448 TACCGGAGATATAGCTTCCACTGGCACGAATATTACTAAT-TGATAGACCTATTCCCCCT 63506
|||| | ||||| || ||| ||||||||| | || ||| ||||| | || |||
Sbjct 1482 TACCTGCAATATAAGAGCCTGTGGAACGAATATTGTTGATATGA-AGACCAACACCACCT 1540
Query 63507 GCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCA 63566
|| | || || || | || || ||| || ||||| || ||||| || ||| ||
Sbjct 1541 GCAGTCTTGGAAATCATGGCACACTCTTTCAAAGTGTCGTAAATACCTTCAATGGAGTCG 1600
Query 63567 TCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAAT 63626
|| ||||| || || ||||| ||||||||| || | || || |||||||||
Sbjct 1601 TCCTTCATGGCAATCAGGAAACAAGAAGACATTTGAGGATGTGGCGTACCGGCATTAAAT 1660
Query 63627 AAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCT 63686
| || || |||||||| || || || | || | | ||||| |||| | |
Sbjct 1661 AGTGTGGGGGAAGCGTGGGTGAAGTATCTCAACGACATCAAGTTGTAAGTCTTCAGCACG 1720
Query 63687 GAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTT 63746
|| || ||||| | ||||| |||| || |||||||| | || || || || | |
Sbjct 1721 GACTCGATATCGCTGCCGTGAATACCTAGGGCCACACGCATGACCAAATGTTGGGGACGT 1780
Query 63747 TCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAA 63806
|| | | | || || | | | || ||| || ||||| ||| ||||| ||||||
Sbjct 1781 TCGGCCACTTCACCGTCTAGTCTTAGCAGGTA-GAACGTTCCAGAGTCTTAAACCCAAAA 1839
Query 63807 TAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATT 63864
||| |||| ||||| |||| ||||| | || ||||||| || |||| || | ||
Sbjct 1840 TAGGTGTACTTGAAA--TCTCTGTCGTACACGATGGCCGAGTTCAGCGTATCTTTGTTTT 1897
Query 63865 TGTTAACTATATCCATGGTGA-TACTT--GAAATAATCGGAGAATGTTTCCCATTTTTAG 63921
| || |||| || || | | | ||||| || || | ||| ||||| | ||
Sbjct 1898 CCATGACAATAT---TGTAGACTTCATCCGAAATCATAGGGGCATGCTTCCCCGTGGCAG 1954
Query 63922 GATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGT 63981
| || || ||| | || ||||| || || | || | ||| | || | ||| |
Sbjct 1955 GGTTGACCCAGTCGTGCAAGTCCTCAATGACCTTGGAGAACTGCTTTGTGGTCTGCTTAT 2014
Query 63982 GTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTAC 64041
||| || || | ||| ||||| ||||| | |||| ||||| || || || || |
Sbjct 2015 GTAAGTTGGAGATGGCAATTCTAGCGGCCAACGTGGCGTAATCAGGGTGCACCGTGGT-C 2073
Query 64042 AAGT-GGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCC 64093
| || || | | ||||| ||||| |||||| ||| || || || || ||
Sbjct 2074 ATGTATGCACATGTCTCGGCAGCCAGGTTGTCCAGTTCGACGGTGGTGACACC 2126
>seq3120
Length=488
Score = 136 bits (150), Expect = 5e-27
Identities = 317/470 (67%), Gaps = 6/470 (1%)
Strand=Plus/Plus
Query 63393 GCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCG 63452
|| ||||| || | || | | ||| ||||| | ||||| || | || || |||||
Sbjct 1 GCAGTGTTGTTGAAGACACGGATCATAGGAATTAACCCGTTAGAAGTCCCGTTCGTACCA 60
Query 63453 GAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATT 63512
| || || || | |||||||| || ||| |||||| || || || || ||
Sbjct 61 GCAATGTAAGAGCCGGTTGCACGAATGTTGTGAATATGTAGACCAATACCACCAGCAGTT 120
Query 63513 TTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATC 63572
|| || || || || ||| || || ||||| |||||||| || ||| |||||| ||
Sbjct 121 TTGGAAATCAAAGCACATTCCTTCAAAGTGTCGTAGATACCTTCAATGGAATCATCCTTC 180
Query 63573 ATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTA 63632
|| || ||| |||||| |||||||| | || || || || ||||| ||
Sbjct 181 ATTGCAACTAGGAAACAGGAGGACATTTGAGGCTTTGGTGTACCAGCGTTGAATAAAGTT 240
Query 63633 GGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCT 63692
||||| ||||| ||||| ||||| || | | || || || || | ||| | ||
Sbjct 241 GGAGAGGCGTGAGTAAAGTATTTTAGGGACATCAAGTTATAGGTTTCTAGAGCGGCCTCA 300
Query 63693 ATATCC-CATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAAC 63751
|| | || | ||||| |||| ||||| | ||| | | ||| || || | |||| |
Sbjct 301 ATGTTATCACCG-TGAATACCTAAGGCGACTCTCATGATTAAGTGTTGTGGACGTTCAGC 359
Query 63752 GATCTTGTT-GTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGT 63810
| |||| ||| | | |||| ||||| || ||| |||||||||||||| || ||
Sbjct 360 AA-CTTGACCGTTGACTCTCAATAAGTACGAACGTTCTAAAGTTTTAAAACCGAAGTAAC 418
Query 63811 TGTA-TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTT 63859
|||| |||||| |||| || || | |||| | ||||| |||||||||||
Sbjct 419 TGTACTGAAAA-TCTCTGTCATAGACAATAGCTGAGTTTAGTTTATCCTT 467
>seq2084
Length=1521
Score = 132 bits (146), Expect = 6e-26
Identities = 388/590 (66%), Gaps = 12/590 (2%)
Strand=Plus/Minus
Query 33295 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 33354
|||| |||||| || || ||| ||||| ||| |||||||| | || |||||||||||
Sbjct 931 AACAACAAACAGGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAGATCAGTTCGTTGGAG 872
Query 33355 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCA 33414
|| || | |||||||| | || | || || | ||| || ||||| ||||| || ||
Sbjct 871 AAGGTCAAACCGGGCATCATACCTCTTTTCTTCAACCAGAAGATGGAGGCGAAGGACCCG 812
Query 33415 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG----C 33470
|||||||||| ||||| | | || || || | ||||| || || ||| || |
Sbjct 811 GAAAAGAAGACACCTTCGATGGAGGCGAACGCGACCAGTCTTTCACC-GAACAGGGCATC 753
Query 33471 GCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTC 33530
| ||| || ||||| | | ||||| |||||||||| | || || || ||
Sbjct 752 GGCGTCCTGGATCCATCTAAGGGCCCATTCGGCCTTCTCGCAGATTTCTGGGATGGTGTC 693
Query 33531 TATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAG 33590
||||| || || | | | |||| || || || | || || |||||||| |
Sbjct 692 GATGGCGTTGAACAAGAACTCGCTTTCCTTGGGGTCCTTGATGTAGGTGTCGATCAACAA 633
Query 33591 ACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGC 33650
|| |||| || || ||||| || || || ||||| || |||||||||| | ||
Sbjct 632 GGAGTAGGTTTCGGAGTGGATGTTCTCGATTGCGATCTGGAACCCGTAGAAACTCTTGGC 573
Query 33651 CTCGGTAATCTGTACTTCTGTACAAAATCGTTC-CG-CCAAATTTTCATTCACTATTCCG 33708
||| | ||||| || || || | || |||| || |||| ||||| || || || |||
Sbjct 572 CTCCGGGATCTGGACCTCGGTGGAGAA--GTTCTCGACCAAGTTTTCGTTGACGATACCG 515
Query 33709 TCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCG-TCTGGT--GTT 33765
|| ||| || || || || | || || || || ||||| | | || ||
Sbjct 514 TCGGAGGCGGCGAAGAAGGCAAGCACTCTGGAGATGAAGAATCTTTCGTTTTCGTTCATT 455
Query 33766 AGTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGAT 33825
|| ||||| || | ||| || || || | || | ||| || | ||||| || ||
Sbjct 454 CTGTTGTTCCAGTCGTGGATGTCCTTGGACAAGTCGATTTCCTCGGCAGTCCAGAAGGAG 395
Query 33826 GCCTCTGCCTTTTTATACATGTTCCAGATGTCATAATATTGGATTGGGAA 33875
||||| || || ||| | |||||| || | || ||||| |||||
Sbjct 394 GCCTCGGCACGCTTGTACGATTGCCAGATCTCGTGGTACTGGATGGGGAA 345
>seq3620
Length=287
Score = 82.4 bits (90), Expect = 1e-10
Identities = 105/140 (75%), Gaps = 5/140 (4%)
Strand=Plus/Plus
Query 62120 ATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGT 62179
||||| ||| || |||||||||| | | | | ||| || ||||| || ||||| ||
Sbjct 63 ATTCAAAGAATGGGATTGATCGATGTAAACGGCACGGTCGGCTGCCATGTTAATGATAGT 122
Query 62180 CTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGAAGGTTT- 62237
|||||||| ||||||||||| ||| ||||| || || | ||| |||| ||| | ||||
Sbjct 123 CTTTTGTGAAATTTCCCAAACAGTCTTATACAAATCTTTCAAT-TCTTGTGGTACGTTTG 181
Query 62238 GTATTC--TGAATGGATCCA 62255
||| | |||||||| |||
Sbjct 182 GTAAACCTTGAATGGAACCA 201
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622916169442600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |