Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F000732305.1_202014-07-21] 3,985 sequences; 11,595,011 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1567 156 1e-32 >seq1567 Length=2367 Score = 156 bits (172), Expect = 1e-32 Identities = 574/882 (65%), Gaps = 23/882 (3%) Strand=Plus/Minus Query 363448 GAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGAT 363507 ||||| || || ||| || | |||||||| || | ||||| || || ||| | || Sbjct 1782 GAACGTCCCCAACATTTGGTCATGCGTGTGGCCCTAGGTATTCACGGCAGCGATATCGAG 1723 Query 363508 GCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTG-TA-TTCACGCACGCCACGCCAA 363565 ||| | | | || || || ||| | || | | | || ||||| ||||| | || | Sbjct 1722 TCCGTGCTGAAGACTTACAA-CTTG-ATGTCGTTGAGATACTTCACCCACGCTTCCCCCA 1665 Query 363566 CAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGA 363625 || | | ||||| || || | |||| || ||||||||||| || || | |||| Sbjct 1664 CACTATTTAATGCCGGTACGCCACATCCTCAAATGTCTTCTTGTTTCCTGATTGCCATGA 1605 Query 363626 AGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGA 363685 ||||||| ||||| || ||||| | ||||| | || | ||||| | |||||||||| Sbjct 1604 AGGACGACTCCATTGAAGGTATTTACGACACTTTGAAAGAGTGTGCCATGATTTCCAAGA 1545 Query 363686 ATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCG-TGCACAGAACAGTTACATTCGC 363744 |||||| || ||||| | ||| ||||| |||| | ||||| | ||| ||| Sbjct 1544 CTGCAGGTGGTGTTGGTCTTCATATCAACAATATTCGTTCCACAG-GCTCTTATATTGCA 1486 Query 363745 GGCACAGGGGGATAC-TCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGC 363803 || || || ||| || || ||| || |||||||| | ||||| || |||| ||||| Sbjct 1485 GGTACCAACGG-TACTTCAAACGGGTTGATTCCCATGATCCGTGTCTTCAACAACACTGC 1427 Query 363804 GAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCC 363863 | ||||| ||||| ||||| ||| | || || ||||| | | | ||||| Sbjct 1426 ACGTTACGTGGACCAAGGTGGTAACAAGAGACCCGGTGCCTTTGCCCTTTTCTTGGAGCC 1367 Query 363864 TCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACAC-GGGAAAAGAGGAAT 363922 ||||| || || || || ||| | || | | |||| || | || || || ||| Sbjct 1366 ATGGCATGCAGACATCTTCGACTTTGTCGATAT-CAGAAAGACTCATGGTAAGGAAGAAA 1308 Query 363923 TGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGG 363982 | |||||| | ||| ||||| ||| || ||| || | || | ||| |||||||| || | Sbjct 1307 TTCGTGCAAGAGATTTGTTCCCTGCTCTATGGATTCCCGATCTTTTCATGAAGCGTGTCG 1248 Query 363983 AGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATG----TCCAGGTCTTTCCGAT 364038 | | | | | ||| | ||| | | ||| | | || |||||| | ||| Sbjct 1247 AAGAGGATGGGGCCTGGAC---CTTATTCTCAC-CAAGTGCTGCCCCAGGTTTGGACGAC 1192 Query 364039 GTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGC-TCG 364097 || |||||||| || | | | ||||| || ||| || ||| | | | | Sbjct 1191 GTTTGGGGTGAAGAATTCGAAGAGCTATATACCCGTTACGAA----AGAGAAGGTCGTGG 1136 Query 364098 TAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGG 364157 ||| || || || || ||| |||||| |||||| || | | || | || || || Sbjct 1135 TAAAACCATCAAGGCTCAAAAGGTATGGTACGCCATCTTGCAAGCACAAACAGAAACCGG 1076 Query 364158 AACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGG 364217 ||||||| ||| | || || ||| | || ||| | ||| ||||||| ||| |||| || Sbjct 1075 TACACCCTTCATGGTTTATAAGGATGCCTGTAACAGAAAGACCAACCAACAGAACCTGGG 1016 Query 364218 TACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGAC 364277 ||| || | | ||| | ||| ||| || | || || | | || || || || Sbjct 1015 TACCATCAAATCGTCAAACTTGTGTTGCGAAATCGTCGAGTATTCTTCCCCAGATGAAAC 956 Query 364278 TGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT 364319 ||| || ||||| | || || || || || || || || || Sbjct 955 TGCTGTTTGTAATTTAGCTTCCATTGCTCTACCAGCATTCGT 914 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303287053616270