Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F000732305.1_202014-07-21]
3,985 sequences; 11,595,011 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq1567 156 1e-32
>seq1567
Length=2367
Score = 156 bits (172), Expect = 1e-32
Identities = 574/882 (65%), Gaps = 23/882 (3%)
Strand=Plus/Minus
Query 363448 GAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGAT 363507
||||| || || ||| || | |||||||| || | ||||| || || ||| | ||
Sbjct 1782 GAACGTCCCCAACATTTGGTCATGCGTGTGGCCCTAGGTATTCACGGCAGCGATATCGAG 1723
Query 363508 GCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTG-TA-TTCACGCACGCCACGCCAA 363565
||| | | | || || || ||| | || | | | || ||||| ||||| | || |
Sbjct 1722 TCCGTGCTGAAGACTTACAA-CTTG-ATGTCGTTGAGATACTTCACCCACGCTTCCCCCA 1665
Query 363566 CAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGA 363625
|| | | ||||| || || | |||| || ||||||||||| || || | ||||
Sbjct 1664 CACTATTTAATGCCGGTACGCCACATCCTCAAATGTCTTCTTGTTTCCTGATTGCCATGA 1605
Query 363626 AGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGA 363685
||||||| ||||| || ||||| | ||||| | || | ||||| | ||||||||||
Sbjct 1604 AGGACGACTCCATTGAAGGTATTTACGACACTTTGAAAGAGTGTGCCATGATTTCCAAGA 1545
Query 363686 ATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCG-TGCACAGAACAGTTACATTCGC 363744
|||||| || ||||| | ||| ||||| |||| | ||||| | ||| |||
Sbjct 1544 CTGCAGGTGGTGTTGGTCTTCATATCAACAATATTCGTTCCACAG-GCTCTTATATTGCA 1486
Query 363745 GGCACAGGGGGATAC-TCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGC 363803
|| || || ||| || || ||| || |||||||| | ||||| || |||| |||||
Sbjct 1485 GGTACCAACGG-TACTTCAAACGGGTTGATTCCCATGATCCGTGTCTTCAACAACACTGC 1427
Query 363804 GAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCC 363863
| ||||| ||||| ||||| ||| | || || ||||| | | | |||||
Sbjct 1426 ACGTTACGTGGACCAAGGTGGTAACAAGAGACCCGGTGCCTTTGCCCTTTTCTTGGAGCC 1367
Query 363864 TCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACAC-GGGAAAAGAGGAAT 363922
||||| || || || || ||| | || | | |||| || | || || || |||
Sbjct 1366 ATGGCATGCAGACATCTTCGACTTTGTCGATAT-CAGAAAGACTCATGGTAAGGAAGAAA 1308
Query 363923 TGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGG 363982
| |||||| | ||| ||||| ||| || ||| || | || | ||| |||||||| || |
Sbjct 1307 TTCGTGCAAGAGATTTGTTCCCTGCTCTATGGATTCCCGATCTTTTCATGAAGCGTGTCG 1248
Query 363983 AGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATG----TCCAGGTCTTTCCGAT 364038
| | | | | ||| | ||| | | ||| | | || |||||| | |||
Sbjct 1247 AAGAGGATGGGGCCTGGAC---CTTATTCTCAC-CAAGTGCTGCCCCAGGTTTGGACGAC 1192
Query 364039 GTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGC-TCG 364097
|| |||||||| || | | | ||||| || ||| || ||| | | | |
Sbjct 1191 GTTTGGGGTGAAGAATTCGAAGAGCTATATACCCGTTACGAA----AGAGAAGGTCGTGG 1136
Query 364098 TAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGG 364157
||| || || || || ||| |||||| |||||| || | | || | || || ||
Sbjct 1135 TAAAACCATCAAGGCTCAAAAGGTATGGTACGCCATCTTGCAAGCACAAACAGAAACCGG 1076
Query 364158 AACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGG 364217
||||||| ||| | || || ||| | || ||| | ||| ||||||| ||| |||| ||
Sbjct 1075 TACACCCTTCATGGTTTATAAGGATGCCTGTAACAGAAAGACCAACCAACAGAACCTGGG 1016
Query 364218 TACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGAC 364277
||| || | | ||| | ||| ||| || | || || | | || || || ||
Sbjct 1015 TACCATCAAATCGTCAAACTTGTGTTGCGAAATCGTCGAGTATTCTTCCCCAGATGAAAC 956
Query 364278 TGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT 364319
||| || ||||| | || || || || || || || || ||
Sbjct 955 TGCTGTTTGTAATTTAGCTTCCATTGCTCTACCAGCATTCGT 914
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303287053616270
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |