Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F000732305.1_202014-07-21] 3,985 sequences; 11,595,011 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq2084 102 7e-17 >seq2084 Length=1521 Score = 102 bits (112), Expect = 7e-17 Identities = 348/532 (65%), Gaps = 34/532 (6%) Strand=Plus/Minus Query 104887 CAGGCAAAGTCTGTGTGCAATCCTTCATCTCTAGAAATAAGTTCGTTGCTGTAAGTCAAG 104946 ||||||||||| |||||||| ||||| ||||| | || ||||||||| | | ||||| Sbjct 922 CAGGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAGATCAGTTCGTTGGAGAAGGTCAAA 863 Query 104947 CCAGGTAGAGCCCCtttttttGTGTCTTTAATATAGTAGATGGCAGCAAAACTACCGGAG 105006 || || | ||| ||| |||| || || |||||| || || ||||| Sbjct 862 CCGGGCATCATACCTCTTT-----TCTTCAA-CCAGAAGATGGAGGCGAAGGACCCGGAA 809 Query 105007 AAAAAGACACCTTCGACGATGGCAAACGCGACCATGCGTTCGGCGAATGTAGCAGTTTGA 105066 || ||||||||||||| | ||| |||||||||| | ||| |||| ||| | | Sbjct 808 AAGAAGACACCTTCGATGGAGGCGAACGCGACCAGTCTTTCACCGAACAGGGCA--TCGG 751 Query 105067 CTT--TCAATCCATTTCTGAGCCCATGTTGCCTTCCGTTTGACGCTATC---AATGTGCT 105121 | | | |||||| | | |||||| |||||| | | | | || ||| | Sbjct 750 CGTCCTGGATCCATCTAAGGGCCCATTCGGCCTTC---TCGCAGATTTCTGGGATGGTGT 694 Query 105122 CGATGGCATTCAAAATCCTGTCGCATTCCTGAGGATCTTTAATGTA---TTCGA-CCACA 105177 ||||||| || || | |||| ||||| || || || ||||| |||| | ||| Sbjct 693 CGATGGCGTTGAACAAGAACTCGCTTTCCTTGGGGTCCTTGATGTAGGTGTCGATCAACA 634 Query 105178 AGAATGTTGTACATTTCCGTGTGAACGCACTCGATAGATGTCTGTTGCGCATAGAAAAAA 105237 || | ||| |||| | ||| | | |||||| | |||| | | |||||| Sbjct 633 AGGA----GTAGGTTTCGGAGTGGATGTTCTCGATTGCGATCTGGAACCCGTAGAAACTC 578 Query 105238 GACGCCTCC---ATTTCGGGCACGGCCGACTGCATGTGCTCGATGATATTAGTGTTCACG 105294 |||||| || | | | ||| || | || ||||| | || ||| ||| Sbjct 577 TTGGCCTCCGGGATCTGGACCTCGGTGGA---GAAGTTCTCGACCAAGTTTTCGTTGACG 521 Query 105295 ATGACGTCGGCAGCGGCAAAAAACGCGAGAACGTGCTTCAAA--AAGAATCGTTCTTTAT 105352 || |||||| ||||| || || || || || || | | ||||||| ||| || | Sbjct 520 ATACCGTCGGAGGCGGCGAAGAAGGCAAGCAC--TCTGGAGATGAAGAATCTTTCGTTTT 463 Query 105353 CGTTCAGTTTGTTGTTCCAATCGTCAAAGTCTTTGGACATGTCGATTTCTTC 105404 |||||| | |||||||||| |||| | ||| ||||||| ||||||||| || Sbjct 462 CGTTCATTCTGTTGTTCCAGTCGTGGATGTCCTTGGACAAGTCGATTTCCTC 411 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429915119217675