Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F000732305.1_202014-07-21]
3,985 sequences; 11,595,011 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq2938 140 2e-28
seq3059 104 2e-17
seq1250 86.0 4e-12
>seq2938
Length=607
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 326 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 267
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 266 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 232
>seq3059
Length=527
Score = 104 bits (114), Expect = 2e-17
Identities = 69/77 (90%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||||| |||||||||||||||| |||||| |||| |||||||||||||||||||||| |
Sbjct 465 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCATCACTGTACTTGTTCGCTATCGGTCTCTC 406
Query 20007 GGTAATATTTAGCCTTA 20023
| |||||||||| |||
Sbjct 405 GCCAATATTTAGCTTTA 389
>seq1250
Length=3113
Score = 86.0 bits (94), Expect = 4e-12
Identities = 202/295 (68%), Gaps = 10/295 (3%)
Strand=Plus/Minus
Query 6199 CGTTCTACCGCTACAAAATGCCGCGCATCTGCGCCAAGGTCGAGGGTAAGGGAAACGGTA 6258
|||||||||| ||||||||||| | ||| || |||||||| |||| || |||||||
Sbjct 1807 CGTTCTACCGTTACAAAATGCCTCCAATCCAGGCTAAGGTCGAAGGTAGAGGTAACGGTA 1748
Query 6259 TTAAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGAC-GCCCTGCCACC 6317
| ||||| | || | ||| || |||| |||| | ||| | | || | |||||| |
Sbjct 1747 TCAAAACAGCAATCCTGAACGTGGCTGACATCGCCCATGCG-TTGAACAGACCTGCCCCA 1689
Query 6318 TAC-CCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCA-CAAAA 6375
||| || | || || ||||| | |||||| || ||||| || | | | || | | |
Sbjct 1688 TACATCGTC-AAGTACTTCGGTTTCGAACTGGGTGCTCAAAC-CTCTATCTCCATCGACA 1631
Query 6376 ACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACG 6435
| || || | | |||||||| ||| | |||| ||| |||| ||| | | ||||
Sbjct 1630 AAGATCGTTATTTGGTTAACGGTGTTCATGAACCTGCTAAGTTGCAAGACGTGTTGGACG 1571
Query 6436 GCTTTATTCGCAAGTTTGTGCTGTGTCGGGAA--TGCGATAACCCGGAGACCGAG 6488
| || || || |||||| || ||| |||| || | || || || ||||||
Sbjct 1570 GGTTCATCAACAGGTTTGTTCTTTGT--GGAAGTTGTAAGAATCCAGAAACCGAG 1518
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334930932556535
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |