Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F000732305.1_202014-07-21]
3,985 sequences; 11,595,011 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq1567 226 4e-54
seq3120 127 3e-24
>seq1567
Length=2367
Score = 226 bits (250), Expect = 4e-54
Identities = 1356/2145 (63%), Gaps = 66/2145 (3%)
Strand=Plus/Plus
Query 61846 CAATG-TGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 61904
||||| | |||||||||| || || |||| || || | | |||||||| ||||| |
Sbjct 6 CAATGGTAAATTGAATGGCTGCAGAAGCGGCTTGTGTTCTCAAGTAGTACATACCCGTCT 65
Query 61905 TTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAACTCG-GATC 61962
| | ||| |||| ||||| ||||||||||| || | ||| || | | |||
Sbjct 66 TCAAACCCTTCTTCCAACCGTAGAAATGCATACTTGTAATTTTACCCATTGATGGTGAT- 124
Query 61963 TGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCAT 62022
|| || | ||||| || || |||||| ||| | | || ||||||||
Sbjct 125 TG-TAGGAACAAATTCAAGGAGTGGGATTGATCAATGTAAATGGAACGATCAGCAGCCAT 183
Query 62023 TTTTATAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTC 62082
|| ||||| |||||||| | |||||||| | ||||||||| | || | |||||
Sbjct 184 GTTGATAATAGTCTTTTGAGAGATTTCCCAGACAGTTTTATATAGATCTTTCAAATCTTG 243
Query 62083 TGGAAGGTTTGT---ATTCTGAATGGATCCACCATCTGCCATAATCC--TATTCTTG-AT 62136
|||| ||||| || | |||||| ||| | | ||||| |||| || ||
Sbjct 244 AGGAACGTTTGGTAAATCTTTAATGGAGCCATTTTGAG---TAATCAAATATTGTTTCAT 300
Query 62137 CTCATCATTCCATAATTTTCTC-TCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTT 62195
||||| ||| ||| | ||| |||| | | || | | ||||| || ||||
Sbjct 301 ACTATCATCCCA-AATGCCCAGATCGACTAAATCACGTAGTAAGTATGGATTGACGACTT 359
Query 62196 GAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACT 62255
| ||||| ||||| || || | |||| ||| || || || ||||| | | |||
Sbjct 360 GGAATTCACCAGATAAGACACGACGAGAGTACATGTTTGAAGTGACTGGTTCGAAACACT 419
Query 62256 CATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTAT 62315
|||| | || | |||||| | ||||| || || ||||| || |||| |||| |
Sbjct 420 CATTGTACCCAAGAATTTGGGATGTTGAAGCGGTTGGCATTGGGGCCATGGTTAAAGAGT 479
Query 62316 TTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACG 62375
|||| | || | | | || | | || | || ||||||| ||| | | | |
Sbjct 480 TTCTTAACCCATGTTTCACAATGTCCTTCTTCAAAGTGTCCCAATCCCACATGCCAAATG 539
Query 62376 GTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATG 62435
| | | |||| |||||| ||| ||| || ||| || | |
Sbjct 540 GCTTAGCATTCCACATGTCGAACTGTAAAATACCCTTAGAGGCAGGAGAGCCTTCAAAAG 599
Query 62436 TATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAA 62495
| ||| |||||||| | ||||| |||||| || || | | | | | ||||
Sbjct 600 TGGAATATTTACCTTCCTTTTGAGCTAACTCACAAGAAGCTTCAAGGGTAGCATGGTAAA 659
Query 62496 TGGTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATGGATAATTTA 62555
| |||||||| || | ||||| || ||| |||| | |||||||| || |
Sbjct 660 TAGTTTCGAAAATTTGTTTATTAAGTATTTGAGCTTTTTCACATTCAAATGGTAAACGCA 719
Query 62556 AGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 62615
| ||| | | || || || |||||||| || | | |||||||||||| || | |
Sbjct 720 GCATCATATAAGTATCGGCCAAACCTTGAACCCCCAGGGCAATAGGTCTATGTTTCATGT 779
Query 62616 TAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTC 62675
||||| || ||| ||||| | |||||||| ||| || || | | |||| | | ||
Sbjct 780 TAGAGTTTCTAGCCTCTGGCACTGGATAATAGTTACGGTCGATGACTCTATTCA-AGTTA 838
Query 62676 TGACA-ATTACTTTGACCACATCCT-TCAGTTTGAGAAAATCAAA-TCGCC-------CA 62725
||| || ||||| | | || | | | || |||| | | ||||| ||
Sbjct 839 TGAGTGATGACTTTAGCAATGTCATGTAAACTTTGGAAATTGTAGGTCGCCGTTTTACCA 898
Query 62726 TCT-----ATTACAAAC--ATGTTC--AATGCAACAGATGCCAGATTACAAACGGCTACC 62776
||| | | ||| ||| | | |||| || || | ||||||||| ||
Sbjct 899 TCTTCCGAAGTCTCAACGAATGCTGGTAGAGCAATGGAAGCTAAATTACAAACAGCAGTT 958
Query 62777 TCATTAGCATCCGCATATTGTATTATCTCAGTGCA-AAGATTACTAC-ACTTGATGGTTC 62834
|||| | | ||| | | || || || ||| || || | |||||||| |
Sbjct 959 TCATCTGGGGAAGAATACTCGACGATTTCGCAACACAAGTTTG--ACGATTTGATGGTAC 1016
Query 62835 CTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTAC 62894
| | || ||||| || ||||| ||||||| ||||||||||||| ||||| || ||||
Sbjct 1017 CCAGGTTCTGTTGGTTGGTCTTTCTGTTACAGGCATCCTTATAAACCATGAAGGGTGTAC 1076
Query 62895 CAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATT 62954
| ||||| | || | || | || || | ||| || | ||||||| || | ||
Sbjct 1077 CGGTTTCTGTTTGTGCTTGCAAGATGGCGTACCATACCTTTTGAGCCTTGAT----GGTT 1132
Query 62955 TGTATCTC--TTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAAC 63012
| || | | |||||||||||| | ||||| | |||||| || || ||||||||
Sbjct 1133 T-TACCACGACCTTCTCTTTCGTAACGGGTATATAGCTCTTCGAATTCTTCACCCCAAAC 1191
Query 63013 ATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCAC 63072
| ||||| || || || || | | || | ||| | || || || | ||
Sbjct 1192 GTCGTCCAAACCTGGGGCAGCACTTGGTGAGAATAAGGTCCAGGCCCCATCCTCTTCGAC 1251
Query 63073 TCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTC 63132
|| ||||| || ||||| |||||||| ||||| || | |||||| | | | |||
Sbjct 1252 ACGCTTCATGAAAAGATCGGGAATCCATAGAGCAGGGAACAAATCTCTTGCACGAATTTC 1311
Query 63133 CTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTC 63192
|| || || | ||||| | | ||||| || | | || || | |||||| || ||
Sbjct 1312 TTCCTTACCATGAGTCTTTCTGATATCGACAAAGTCGAAGATGTCTGCATGCCATGGCTC 1371
Query 63193 CAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGT 63252
|||| | | ||| | | || || | ||||| || || || || | ||| | || ||
Sbjct 1372 CAAGAAAAGGGCAAAGGCACCGGGTCTCTTGTTACCACCTTGGTCCACGTAACGTGCAGT 1431
Query 63253 GTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGAT 63312
||| || | || | | ||| ||||| | || || || ||||| ||||| |||| ||
Sbjct 1432 GTTGTTGAAGACACGGATCATGGGAATCAACCCGTTTGAAGTACCGTTGGTACCTGCAAT 1491
Query 63313 ATAGCTTCCACTGGCACGAATATTACTAAT-TGATAGACCTATTCCCCCTGCCATTTTAG 63371
||| || ||| ||||||||| | || ||| ||||| | || ||||| | || |
Sbjct 1492 ATAAGAGCCTGTGGAACGAATATTGTTGATATGA-AGACCAACACCACCTGCAGTCTTGG 1550
Query 63372 AGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGT 63431
| || | || || ||| || || || || || || || || || ||| |||||
Sbjct 1551 AAATCATGGCACACTCTTTCAAAGTGTCGTAAATACCTTCAATGGAGTCGTCCTTCATGG 1610
Query 63432 TAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAG 63491
|| || ||||| ||||||||| || | || || |||||||||| || || |
Sbjct 1611 CAATCAGGAAACAAGAAGACATTTGAGGATGTGGCGTACCGGCATTAAATAGTGTGGGGG 1670
Query 63492 AAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATAT 63551
||||||| || || || | || | | ||||| |||| | | || || ||||
Sbjct 1671 AAGCGTGGGTGAAGTATCTCAACGACATCAAGTTGTAAGTCTTCAGCACGGACTCGATAT 1730
Query 63552 CCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCT 63611
| | ||||| |||| || |||||||| | || || || || | ||| | | |
Sbjct 1731 CGCTGCCGTGAATACCTAGGGCCACACGCATGACCAAATGTTGGGGACGTTCGGCCACTT 1790
Query 63612 TGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-- 63669
|| || | | | || ||| || ||||| ||| ||||| ||||||||| ||||
Sbjct 1791 CACCGTCTAGTCTTAGCAGGTA-GAACGTTCCAGAGTCTTAAACCCAAAATAGGTGTACT 1849
Query 63670 TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTAC 63729
||||| |||| ||||| | || ||||||| || |||| || | || | || |
Sbjct 1850 TGAAA--TCTCTGTCGTACACGATGGCCGAGTTCAGCGTATCTTTGTTTTCCATGACAAT 1907
Query 63730 ATCCATGGTAATACTT-----GAAATAATAGGAAAATGTTTCCCATTTTTAGGATTGACA 63784
|| || | |||| ||||| ||||| ||| ||||| | ||| |||||
Sbjct 1908 AT---TG--TAGACTTCATCCGAAATCATAGGGGCATGCTTCCCCGTGGCAGGGTTGACC 1962
Query 63785 TAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTT 63844
||| | || ||||| || || | || | ||| | || | || |||| ||
Sbjct 1963 CAGTCGTGCAAGTCCTCAATGACCTTGGAGAACTGCTTTGTGGTCTGCTTATGTAAGTTG 2022
Query 63845 GATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGT-GGC 63903
|| | ||| ||||||||||| | |||| ||||| || || || || || || ||
Sbjct 2023 GAGATGGCAATTCTAGCGGCCAACGTGGCGTAATCAGGGTGCACCGTGGT-CATGTATGC 2081
Query 63904 TGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACACC 63948
| | ||||| ||||| |||||| ||| || || || |||||
Sbjct 2082 ACATGTCTCGGCAGCCAGGTTGTCCAGTTCGACGGTGGTGACACC 2126
>seq3120
Length=488
Score = 127 bits (140), Expect = 3e-24
Identities = 315/470 (67%), Gaps = 6/470 (1%)
Strand=Plus/Plus
Query 63248 GCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCT 63307
|| ||||| || | || | | ||| ||||| | || || || || || || || ||
Sbjct 1 GCAGTGTTGTTGAAGACACGGATCATAGGAATTAACCCGTTAGAAGTCCCGTTCGTACCA 60
Query 63308 GAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATT 63367
| || || || | |||||||| || ||| |||||| || || || || ||
Sbjct 61 GCAATGTAAGAGCCGGTTGCACGAATGTTGTGAATATGTAGACCAATACCACCAGCAGTT 120
Query 63368 TTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATC 63427
|| || || || || ||| || || || || ||||| || || || ||||||| ||
Sbjct 121 TTGGAAATCAAAGCACATTCCTTCAAAGTGTCGTAGATACCTTCAATGGAATCATCCTTC 180
Query 63428 ATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTA 63487
|| || ||| |||||| |||||||| | || || || || ||||| ||
Sbjct 181 ATTGCAACTAGGAAACAGGAGGACATTTGAGGCTTTGGTGTACCAGCGTTGAATAAAGTT 240
Query 63488 GGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCT 63547
||||| ||||||||||| ||||| || | | || || || || | ||| | ||
Sbjct 241 GGAGAGGCGTGAGTAAAGTATTTTAGGGACATCAAGTTATAGGTTTCTAGAGCGGCCTCA 300
Query 63548 ATATCC-CATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAAC 63606
|| | || | ||||| |||| ||||| | ||| | | ||| || || | |||| |
Sbjct 301 ATGTTATCACCG-TGAATACCTAAGGCGACTCTCATGATTAAGTGTTGTGGACGTTCAGC 359
Query 63607 GATCTTGTT-GTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGT 63665
| |||| ||| | | |||| ||||| || ||| |||||||||||||| || ||
Sbjct 360 AA-CTTGACCGTTGACTCTCAATAAGTACGAACGTTCTAAAGTTTTAAAACCGAAGTAAC 418
Query 63666 TGTA-TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTT 63714
|||| |||||| |||| || || | |||| | ||||| |||||||||||
Sbjct 419 TGTACTGAAAA-TCTCTGTCATAGACAATAGCTGAGTTTAGTTTATCCTT 467
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633600437206000
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