Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F000732305.1_202014-07-21] 3,985 sequences; 11,595,011 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq2084 95.1 2e-14 seq3485 89.7 9e-13 >seq2084 Length=1521 Score = 95.1 bits (104), Expect = 2e-14 Identities = 282/431 (65%), Gaps = 8/431 (2%) Strand=Plus/Minus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 |||||| || ||||| ||||| || || || | ||||||||||||| ||| || | Sbjct 1226 CATGACACCGGCCTTTTGGTAGTCGGAGACTCTCTTTTCGAAGAAGTTGGTCTTACCGGC 1167 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054 | ||||||| |||||||| || |||||||| ||| | | | ||| || ||| Sbjct 1166 CAAGGAAATGTTTTCCATGAAATCGAAGGGGTTGTCGACCTTGTAGTACTTCTTGTTACC 1107 Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114 || || |||| | ||| || |||||||||| ||| ||| |||||| ||| | ||| Sbjct 1106 GAAGGCGACCAAAAGTCTGTCTGCGACGAACTCGACGTATTGGTTCATCAAGTCGGCGTT 1047 Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGT-CCTT--TTCGTTGGCGAC 10171 ||| || | || | | || | |||||| | ||||| ||| |||| | |||| Sbjct 1046 CATACCTAGCAAGGCGACTGGCAAGGCGTC---TAGGAAGTATCTTTGTTCGATCTCGAC 990 Query 10172 CGCTTCCTCGACGATGCTCTTTACCACGTCAAGGGACAGCTTGTTCTCGAGCTTCGAATA 10231 || || |||||| ||| || | | | || | ||||||| | | | | | Sbjct 989 GGCCTCGGTGACGATTTTCTCGACGATGGCTGGGTCCGGCTTGTTTTTCAAGTGGGCGAA 930 Query 10232 CAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAA 10291 || | |||| | ||| | || ||||| | || ||| | |||||||| || Sbjct 929 CAACAAACAGGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAGATCAGTTCGTTGGAGAA 870 Query 10292 ACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGGA 10351 || ||||||||| | || | || || |||||| |||| | ||| |||||| Sbjct 869 GGTCAAACCGGGCATCATACCTCTTTTCTTCAACCAGAAGATGGAGGCGAAGGACCCG-- 812 Query 10352 GAACAGAAGAC 10362 ||| ||||||| Sbjct 811 GAAAAGAAGAC 801 >seq3485 Length=333 Score = 89.7 bits (98), Expect = 9e-13 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || |||||||||||||||||||| | |||||| || |||||||||| ||||| ||| Sbjct 333 ATACCTTCCTTGTCTTGAATCTTAGACTTGACATTGTCAATGGTGTCTGAAGATTCAACT 274 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||| || || || || || | ||||||||||| || ||||| Sbjct 273 TCAAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921576491684200