Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F000732305.1_202014-07-21]
3,985 sequences; 11,595,011 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq2084 264 2e-65
>seq2084
Length=1521
Score = 264 bits (292), Expect = 2e-65
Identities = 591/873 (68%), Gaps = 26/873 (3%)
Strand=Plus/Plus
Query 42285 ATCGAGCACCAGGACATCTGGTCCAT-GTACAAGAAGGCGCAGTTCTCCAACTGGACCGC 42343
||| || |||| || |||||| | || ||||||| || || |||| |||||| ||
Sbjct 351 ATCCAGTACCACGAGATCTGG-CAATCGTACAAGCGTGCCGAGGCCTCCTTCTGGACTGC 409
Query 42344 CGAGGAGATTGACCTGGCCAAGGACACGGCCGGCTGGGAGTC---ACTGTCTGAGAACGA 42400
|||||| || ||| || ||||||||| || |||| | | || || |||||
Sbjct 410 CGAGGAAATCGACTTGTCCAAGGACATCCACGACTGGAACAACAGAATGAACGAAAACGA 469
Query 42401 AAAGTTTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGA 42460
|| || ||| || | | || ||||||||||||||||| ||||| || ||||| ||
Sbjct 470 AAGATTCTTCATCTCCAGAGTGCTTGCCTTCTTCGCCGCCTCCGACGGTATCGTCAACGA 529
Query 42461 GAACCTGGCCACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGG 42520
||| ||| | | ||| | ||||| ||| | ||||| | ||||||||
Sbjct 530 AAACTTGGTCGAGAACTTCTCCACCGAGGTCCAGATCCCGGAGGCCAAGAGTTTCTACGG 589
Query 42521 CTTCCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTA 42580
|||||||| || || |||||| | ||||| || ||| || || || |||| ||
Sbjct 590 GTTCCAGATCGCAATCGAGAACATCCACTCCGAAACCTACTCCTTGTTGATCGACACCTA 649
Query 42581 CATCCTGGATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCAT 42640
|||| ||| ||| || | | ||||||| ||||| || || || || ||
Sbjct 650 CATCAAGGACCCCAAGGAAAGCGAGTTCTTGTTCAACGCCATCGACACCATCCCAGAAAT 709
Query 42641 CAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGA 42700
| ||||||| || ||||| || | |||||| || |||| || |||||| ||
Sbjct 710 CTGCGAGAAGGCCGAATGGGCCCTTAGATGGATCCAGGACGCCGATGCCCTGTTCGGTGA 769
Query 42701 GAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCAT 42760
|| ||||| || || || || |||| || ||||||| || || |||||||||||||
Sbjct 770 AAGACTGGTCGCGTTCGCCTCCATCGAAGGTGTCTTCTTTTCCGGGTCCTTCGCCTCCAT 829
Query 42761 CTTCTGGCTCAAGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCA 42819
||||||| | ||| | | |||| | ||||||||| | |||||||| |||||||| |||
Sbjct 830 CTTCTGGTTGAAGAAAAGAGGTAT-GATGCCCGGTTTGACCTTCTCCAACGAACTGATCT 888
Query 42820 GCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGC 42879
|||| ||||| || |||| | ||||||||||| | ||||| | |||| | |
Sbjct 889 GCAGAGACGAAGGTTTGCACACCGACTTTGCCTGTTTGTTGTTCGC---CCACTTGAAAA 945
Query 42880 ACAAGCCCTCGAAGGAGC--GGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGA--G 42935
||||||| || ||| ||| | ||| |||| |||||||| ||||||||
Sbjct 946 ACAAGCC--GGACCCAGCCATCGTCGAGAAAATCGTCACCGAGGCCGTCGAGATCGAACA 1003
Query 42936 AAG-GAGTTCCTCACGCAGTCGC--TGCCCGTGTCCCTGGTCGGCATGAACCACGACCTC 42992
||| | ||||| || ||| |||| || || || | || |||||| |||| |
Sbjct 1004 AAGATACTTCCT-----AGACGCCTTGCCAGTCGCCTTGCTAGGTATGAACGCCGACTTG 1058
Query 42993 ATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGCCGC 43052
||| | | ||| || ||| |||||| ||| || || | | ||| ||
Sbjct 1059 ATGAACCAATACGTCGAGTTCGTCGCAGACAGACTTTTGGTCGCCTTCGGTAACAAGAAG 1118
Query 43053 CTCTACAA-CACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGAC 43111
|||||| || | ||||||||| || ||||| ||||| || |||| || |||||
Sbjct 1119 TACTACAAGGTCGAC-AACCCCTTCGATTTCATGGAAAACATTTCCTTGGCCGGTAAGAC 1177
Query 43112 CAACTTTTTCGAGAAGCGCGTCGCCGACTACCA 43144
|||||| ||||| ||| | ||| ||||||||||
Sbjct 1178 CAACTTCTTCGAAAAGAGAGTCTCCGACTACCA 1210
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944292160103600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |