Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F000732305.1_202014-07-21] 3,985 sequences; 11,595,011 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq18 111 2e-19 seq3120 95.1 1e-14 >seq18 Length=17773 Score = 111 bits (122), Expect = 2e-19 Identities = 136/186 (73%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 160691 CCAGTAGGTGTCTACGGTCGCGTGGCACCAAGATCTGGTCTCGCTGTGAAGAGTGGTATC 160750 ||||| ||| ||||||| | | || |||||||| || || || ||||| | ||||| Sbjct 16930 CCAGTCGGTACCTACGGTAGAATCGCGCCAAGATCAGGCCTAGCAGTGAAAAACGGTATT 16871 Query 160751 CAAGTTGGTGCGGGTGTTGTGGATCCAGACTACACAGGTGAAGTCAAAGTCGTTCTCTTC 160810 ||| ||||| |||||||| || ||||||||| ||||||||||| || | | || Sbjct 16870 CAAACGGGTGCTGGTGTTGTCGACAGAGACTACACCGGTGAAGTCAAGGTTATCTTATTT 16811 Query 160811 AATCACGGGCACACAGATTTCCAAATCAAAAGGGGGGATCGCATCGCGCAACTCATCTTA 160870 ||||| ||| | |||||| ||||||| || ||||| ||||| ||| | ||||| Sbjct 16810 AATCATTCGCAGAAGGATTTCGCGATCAAAAAAGGTGATCGTATCGCCCAATTGATCTTG 16751 Query 160871 GAGAGG 160876 || ||| Sbjct 16750 GAAAGG 16745 >seq3120 Length=488 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 115058 TGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTG 115117 || || || | ||||||||| || || || || || || || ||| | | | || Sbjct 91 TGAATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAAGTG 150 Query 115118 CCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGT 115177 ||||||| || || || || ||| |||| |||| | ||||| ||| |||||||| Sbjct 151 TCGTAGATACCTTCAATGGAATCATCCTTCATTGCAACTAGGAAACAGGAGGACATTTGA 210 Query 115178 GGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTT-GGGA 115236 ||| ||||||||||||||||||| | ||||| | |||| || || || || |||| Sbjct 211 GGCTTTGGTGTACCAGCGTTGAATAAAGTTGGAGAGGCGT-GAGTAAAGTATTTTAGGGA 269 Query 115237 CATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACC 115287 |||| | ||||| || | |||| ||||| || ||||||||||| Sbjct 270 CATCAAGTTATAGGTTTCTAGAGCGGCCTCAATGTTATCACCGTGAATACC 320 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597323844323800