Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F000732305.1_202014-07-21]
3,985 sequences; 11,595,011 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq18 114 2e-20
seq3120 87.8 2e-12
>seq18
Length=17773
Score = 114 bits (126), Expect = 2e-20
Identities = 137/186 (74%), Gaps = 0/186 (0%)
Strand=Plus/Minus
Query 163353 CCAGTAGGTGTGTACGGTCGCGTGGCACCAAGATCTGGTCTCGCTGTGAAGAGCGGTATC 163412
||||| ||| |||||| | | || |||||||| || || || ||||| | ||||||
Sbjct 16930 CCAGTCGGTACCTACGGTAGAATCGCGCCAAGATCAGGCCTAGCAGTGAAAAACGGTATT 16871
Query 163413 CAAGTTGGTGCGGGTGTTGTGGATCCAGACTACACAGGTGAAGTCAAAGTCGTTCTCTTC 163472
||| ||||| |||||||| || ||||||||| ||||||||||| || | | ||
Sbjct 16870 CAAACGGGTGCTGGTGTTGTCGACAGAGACTACACCGGTGAAGTCAAGGTTATCTTATTT 16811
Query 163473 AATCACGGACACATGGATTTCCAAATCAAAAAGGGGGATCGCATCGCGCAACTCATCTTA 163532
||||| || | ||||||| |||||||| || ||||| ||||| ||| | |||||
Sbjct 16810 AATCATTCGCAGAAGGATTTCGCGATCAAAAAAGGTGATCGTATCGCCCAATTGATCTTG 16751
Query 163533 GAGAGG 163538
|| |||
Sbjct 16750 GAAAGG 16745
>seq3120
Length=488
Score = 87.8 bits (96), Expect = 2e-12
Identities = 160/232 (69%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 117018 GTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACT 117077
||| || || | ||||||||| || || || || || || || ||| | | | |
Sbjct 90 GTGAATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAAGT 149
Query 117078 GCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTG 117137
| ||||||| || || || || ||| |||| |||| | ||||| ||| ||||||||
Sbjct 150 GTCGTAGATACCTTCAATGGAATCATCCTTCATTGCAACTAGGAAACAGGAGGACATTTG 209
Query 117138 TGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTT-GGG 117196
||| ||||||||||||||||||| | ||||| | |||| || || || || |||
Sbjct 210 AGGCTTTGGTGTACCAGCGTTGAATAAAGTTGGAGAGGCGT-GAGTAAAGTATTTTAGGG 268
Query 117197 ACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACC 117248
||||| | ||||| || | | | ||||| || |||||||||||
Sbjct 269 ACATCAAGTTATAGGTTTCTAGAGCGGCCTCAATGTTATCACCGTGAATACC 320
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613476639672600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |