Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F000732305.1_202014-07-21] 3,985 sequences; 11,595,011 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq18 114 2e-20 seq3120 87.8 2e-12 >seq18 Length=17773 Score = 114 bits (126), Expect = 2e-20 Identities = 137/186 (74%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 163353 CCAGTAGGTGTGTACGGTCGCGTGGCACCAAGATCTGGTCTCGCTGTGAAGAGCGGTATC 163412 ||||| ||| |||||| | | || |||||||| || || || ||||| | |||||| Sbjct 16930 CCAGTCGGTACCTACGGTAGAATCGCGCCAAGATCAGGCCTAGCAGTGAAAAACGGTATT 16871 Query 163413 CAAGTTGGTGCGGGTGTTGTGGATCCAGACTACACAGGTGAAGTCAAAGTCGTTCTCTTC 163472 ||| ||||| |||||||| || ||||||||| ||||||||||| || | | || Sbjct 16870 CAAACGGGTGCTGGTGTTGTCGACAGAGACTACACCGGTGAAGTCAAGGTTATCTTATTT 16811 Query 163473 AATCACGGACACATGGATTTCCAAATCAAAAAGGGGGATCGCATCGCGCAACTCATCTTA 163532 ||||| || | ||||||| |||||||| || ||||| ||||| ||| | ||||| Sbjct 16810 AATCATTCGCAGAAGGATTTCGCGATCAAAAAAGGTGATCGTATCGCCCAATTGATCTTG 16751 Query 163533 GAGAGG 163538 || ||| Sbjct 16750 GAAAGG 16745 >seq3120 Length=488 Score = 87.8 bits (96), Expect = 2e-12 Identities = 160/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 117018 GTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACT 117077 ||| || || | ||||||||| || || || || || || || ||| | | | | Sbjct 90 GTGAATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAAGT 149 Query 117078 GCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTG 117137 | ||||||| || || || || ||| |||| |||| | ||||| ||| |||||||| Sbjct 150 GTCGTAGATACCTTCAATGGAATCATCCTTCATTGCAACTAGGAAACAGGAGGACATTTG 209 Query 117138 TGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTT-GGG 117196 ||| ||||||||||||||||||| | ||||| | |||| || || || || ||| Sbjct 210 AGGCTTTGGTGTACCAGCGTTGAATAAAGTTGGAGAGGCGT-GAGTAAAGTATTTTAGGG 268 Query 117197 ACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACC 117248 ||||| | ||||| || | | | ||||| || ||||||||||| Sbjct 269 ACATCAAGTTATAGGTTTCTAGAGCGGCCTCAATGTTATCACCGTGAATACC 320 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613476639672600