Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F000732305.1_202014-07-21] 3,985 sequences; 11,595,011 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq1291 226 1e-53 seq2882 201 4e-46 seq1976 120 1e-21 seq3050 102 3e-16 seq3827 98.7 4e-15 seq3164 86.0 2e-11 seq203 84.2 9e-11 >seq1291 Length=2983 Score = 226 bits (250), Expect = 1e-53 Identities = 477/696 (69%), Gaps = 23/696 (3%) Strand=Plus/Plus Query 450920 GGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTG--TTTACCAAAATGGAAATGTAG 450977 || |||||| | ||||| || | ||| ||||| | | ||| |||| || | |||| Sbjct 2292 GGTATTGATTTGGGAACAACTTATTCGTGTGTCGCTCATTTTTCCAA--TGACAGGGTAG 2349 Query 450978 AAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTACGGATT 451037 |||| || |||||||||||||| | || || || |||| || ||||| || Sbjct 2350 AAATCATTGCAAATGACCAAGGTAATAGGACCACCCCATCATACGTGGCGTTTACTGACA 2409 Query 451038 CAGAAAGACTTTTAGGGCAAGCTGCTAA--ATCAATGGTAAATTCAAATGCCAAAAACAC 451095 | || ||| | | || | || || || ||||| | | | |||| | | | || || Sbjct 2410 CGGAGAGATTAATTGGTGATGCCGCCAAGAATCAA-GCTGCAATCAA-TCCTCACAATAC 2467 Query 451096 AGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGT-ACAAA--A 451152 ||| | ||||| ||||| ||||| ||||||| | ||| ||| | || || | | Sbjct 2468 AGTCTTCGATGCAAAACGGTTAATCGGCCGTAAATTTGACGATCCTGAAGTGACGACTGA 2527 Query 451153 AGAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAA--AGGAAAGCCCTATATTC-A 451209 | || | ||||| | | | | | ||| | | ||| || || | || || | Sbjct 2528 TGCCAAGCA----TTTTCCGTTCAAG-ATCATATCCAGAGAAGGTAAACC-TGTAGTCCA 2581 Query 451210 AGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCT 451269 |||| | |||||||||||||| || || ||| | ||||| ||||| || || ||||| | Sbjct 2582 AGTAGAATATAAAGGTGAAACAAAGACCTTTACACCTGAGGAAATATCTTCAATGGTGTT 2641 Query 451270 TACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAAT 451329 | || ||||| ||||| || || | ||| | || || | || | |||||| || | Sbjct 2642 GATCAAGATGAAGGAAACTGCGGAGAACTATCTGGGGACTACTGTGAATGATGCTGTGGT 2701 Query 451330 TACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATAT 451389 || |||||||| |||||||||||| | ||| | ||||| || || |||||||| ||| Sbjct 2702 AACCGTTCCCGCCTATTTCAATGATTCTCAAAGACAAGCCACCAAGGATGCAGGGACTAT 2761 Query 451390 TGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGG 451449 ||| ||| | |||||||| || ||||||||||||||||| |||||||| | || || || Sbjct 2762 TGCAGGTATGAATGTTCTGCGTATTATTAATGAACCTACTGCAGCTGCAATTGCTTACGG 2821 Query 451450 ACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGG 451509 || ||| || |||| | | ||| | || | | | |||||||| ||||| || Sbjct 2822 -CTTGGATAA--GAAAGGTAGGGCAGAGCACAACGTCATGATTTTTGATTTGGGTGGCGG 2878 Query 451510 AACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAA 451569 || ||| ||| || | ||||| || || || || |||||||| ||||| || Sbjct 2879 CACCTTCGATGTCTCTCTATTATCAATCGATGAAGGTGTCTTTGAAGTCAAGGCTACTGC 2938 Query 451570 TGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 ||||||||||| | || ||||||||| ||||||| Sbjct 2939 AGGTGATACTCACTTGGGTGGTGAAGATTTTGATAA 2974 >seq2882 Length=644 Score = 201 bits (222), Expect = 4e-46 Identities = 399/579 (69%), Gaps = 29/579 (5%) Strand=Plus/Minus Query 450913 AGCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAA 450972 |||| |||| || ||| | || || |||| ||||||||| | | || | ||| | | Sbjct 606 AGCAGTTGGTATCGATTTAGGTACAACCTATTCATGTGTTGCTCATTTCTCAAACGATAG 547 Query 450973 TGTAGAAATTATAGCAAATGACCAAGGATCAC-GAACTACTCCTTCATGGGTAAGTTTTA 451031 || || ||||| || ||||||||||| | || |||| || ||||| | ||| |||| Sbjct 546 AGTGGAGATTATCGCTAATGACCAAGG-TAACAGAACGACACCTTCGTACGTAGCATTTA 488 Query 451032 CGGATTCAGAAAGACTTTTAGGGCAAGCTGCTAA--ATCAATGGTAAATTCAAATGCCAA 451089 | || | |||||||| | || | |||||||| ||||| ||| ||| | | Sbjct 487 CTGACACCGAAAGACTAATTGGTGACGCTGCTAAGAATCAAGCTGCAATG--AATCCACA 430 Query 451090 AAACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACA 451149 || || || | |||||||||||||| || || |||| || ||| ||| ||| Sbjct 429 CAATACGGTTTTCGATGCTAAACGTTTGATAGGTCGTAAGTTTGACGATCCAGAAGTA-- 372 Query 451150 AAAAGAGA----AAAAATT--CTTTTCTTA-TGATGTAGTAAATCAAAA-AGGAAAGCCC 451201 | || || ||| ||| | ||| | |||| | |||| ||| || || Sbjct 371 ACGAGTGATGCTAAACATTACCCATTCAAAGTGATCGA------CAAAGGAGGCAAACCA 318 Query 451202 TATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCT 451261 | ||||| | ||||| |||||||| || |||||| |||| || |||||||| ||| Sbjct 317 GTGGTGCAAGTGGAATATAAGGGTGAAACCAAGACTTTTACTCCAGAGGAAATTTCCTCT 258 Query 451262 ATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGAT 451321 ||| | | || || ||||| ||||| || || | ||| | || | ||| | ||| Sbjct 257 ATGATCTTAACAAAGATGAAGGAAACTGCTGAGAACTATTTGGGCACAAAAGTAAACGAT 198 Query 451322 GCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCA 451381 || || | || ||||| ||||||||||| ||| ||||| | |||||||| || ||||| Sbjct 197 GCTGTGGTAACGGTTCCGGCTTATTTCAACGATTCACAAAGACAAGCAACCAAGGATGCC 138 Query 451382 GG-ACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCT 451440 || ||| ||||| ||||||||||| | || ||||||||||||||||| || || ||| | Sbjct 137 GGTACA-ATTGCCGGTTTAAATGTCTTACGTATTATTAATGAACCTACCGCTGCCGCTAT 79 Query 451441 AGCATA-----TGGACTAGGAAAATCAAAAGAAACAGAA 451474 || || | ||| || ||| ||||||| |||| || Sbjct 78 TGCCTACGGTTTAGACAAGAAAACTCAAAAGGAACACAA 40 >seq1976 Length=1684 Score = 120 bits (132), Expect = 1e-21 Identities = 188/266 (71%), Gaps = 11/266 (4%) Strand=Plus/Minus Query 451340 GCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTA 451399 ||||| || || ||||| ||| |||| ||||| ||||||||||| || ||| ||| ||| Sbjct 1684 GCTTACTTTAACGATGCTCAAAGGCAGGCAACCAAAGATGCAGGGCAAATTATTGGATTA 1625 Query 451400 AATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAA 451459 || || | || || |||||||||| ||||| || || |||| ||||| | ||| | Sbjct 1624 AACGTATTGCGTGTTGTTAATGAACCCACAGCTGCCGCCTTAGCTTATGG-TTTGGATA- 1567 Query 451460 TCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGAT 451519 || | || |||| | || || ||||| || |||||||| ||| ||| Sbjct 1566 -------AATCTGAGTCAAAAGTTGTTGCGGTTTTTGACTTAGGTGGAGGTACTTTTGAC 1514 Query 451520 ACTTCTGTACTTTCA-ATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATAC 451578 | || | ||| | || || |||| || |||||||| ||| | || |||||||| || Sbjct 1513 ATCTCCAT-CTTGGACATCGATAATGGAGTTTTTGAAGTCAAGTCTACTAATGGTGACAC 1455 Query 451579 TCATCTAGGAGGTGAAGATATTGATA 451604 |||| | || ||||||||| | |||| Sbjct 1454 TCATTTGGGTGGTGAAGATTTCGATA 1429 >seq3050 Length=531 Score = 102 bits (112), Expect = 3e-16 Identities = 266/388 (69%), Gaps = 32/388 (8%) Strand=Plus/Plus Query 451867 TGATTCTAAAATTAGTAAAGATAAA-ATTGATGAAATTGTGCTTGTAGGAGGTTCTACAC 451925 |||||| ||| |||| ||| | | || ||||| || || |||||||| ||||| ||| Sbjct 100 TGATTCGAAA-TTAGACAAGGCACAGATCGATGAGATCGTCCTTGTAGGTGGTTCAACAA 158 Query 451926 GAATTCCTAAAATTCAAGATATGTTGTCTTCTTATTTTGGAGGAAAACAACTATGTAAGA 451985 |||| || ||| | ||| | | | ||| || |||| || || ||| ||| Sbjct 159 GAATCCCAAAAGTGCAAAAACTAGTCTCTGATTTTTTTAATGGTAAGGAACC---TAATC 215 Query 451986 GCGTAA---ATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCTAA 452042 | || ||||||| || ||||| || ||||||||||| |||||||| ||||| ||| Sbjct 216 GTTCAATTAATCCTGACGAGGCTGTCGCTTATGGTGCTGCTGTTCAAGCTGCTATATTAA 275 Query 452043 CAG--GTTCAGATGAT-GAAAAATTAGGAGATATTCTGTTAGTAGATGTAACACCTCTAT 452099 | | | ||| || | || || | | |||| | || || ||||||| | || ||| Sbjct 276 CGGGCGATCA-ATCTTCGACAACTCA--AGATTTGCTATTGTTAGATGTTGCGCCATTAT 332 Query 452100 CTCTTGGAGTTGAAACAGCTGGTGGAATGATGACTAATTTAATTAAACGAGGAACT--TC 452157 |||| || | ||||| || |||||||| ||||| || || ||| | || |||| | Sbjct 333 CTCTGGGTATCGAAACTGCAGGTGGAATCATGACAAAGTTGATT--CCAAGAAACTCAAC 390 Query 452158 TATTCCTTGTAAAAAG-AGTC--AAACATT-TAG---TACAGCAAGTGATAACCAACCAG 452210 |||||| | |||| | || ||| ||| | | ||| || ||||||||||| | Sbjct 391 TATTCC---AACAAAGAAATCGGAAATATTCTCGACTTAC-GC---CGATAACCAACCTG 443 Query 452211 GTGTAACTATTCAAGTGTTTGAAGGAGA 452238 |||| |||||||| |||||||| || Sbjct 444 GTGTTTTAATTCAAGTCTTTGAAGGTGA 471 >seq3827 Length=234 Score = 98.7 bits (108), Expect = 4e-15 Identities = 163/234 (70%), Gaps = 6/234 (3%) Strand=Plus/Minus Query 451364 CAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAA 451423 ||||| || || ||||| || ||||||||||| |||||| | ||||| |||||||| Sbjct 230 CAAGCTACCAAGGATGCTGGTATCATTGCTGGTTTGAATGTTTTGAGAATTGTTAATGAA 171 Query 451424 CCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaT 451483 || || |||||||| | || || || ||| ||||| || | ||||| | | Sbjct 170 CCAACCGCAGCTGCCATTGCCTACGGTTTAGATAAATC---TGACA---AAGAACATCAA 117 Query 451484 ATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGAT 451543 || | || | ||| || ||||| || ||| |||| ||| || | || |||||| | Sbjct 116 ATCATCGTCTATGACTTGGGTGGTGGTACTTTTGATGTTTCCCTATTGTCTATTGAAAAC 57 Query 451544 GGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGAT 451597 || || |||||||| | || || ||||| || ||| | || ||||||||| Sbjct 56 GGTGTCTTTGAAGTGCAAGCCACTTCCGGTGACACCCATTTGGGTGGTGAAGAT 3 >seq3164 Length=471 Score = 86.0 bits (94), Expect = 2e-11 Identities = 110/148 (74%), Gaps = 4/148 (3%) Strand=Plus/Minus Query 451991 AATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAG--GTT 452048 || || |||||||||||||| || |||||||||||||| |||||||| || || | | | Sbjct 248 AACCCGGATGAAGCTGTTGCCTACGGTGCTGCAGTTCAGGCAGCTATCCTTACTGGCGAT 189 Query 452049 CAGATGATGAAAAATTAGGAGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAG 452108 ||| | | ||||| | ||| |||| ||| ||||||| | || | || | ||| Sbjct 188 CAG-TCAACAAAAA-CACAGGATCTTCTTTTACTAGATGTTGCGCCATTGTCCCAAGGAA 131 Query 452109 TTGAAACAGCTGGTGGAATGATGACTAA 452136 ||||||| || || || || |||||||| Sbjct 130 TTGAAACTGCGGGGGGTATCATGACTAA 103 >seq203 Length=9829 Score = 84.2 bits (92), Expect = 9e-11 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 248488 CATGGACAAAAAGGAACAGTTGGTATTACTTTGCCACAAAGAGATATGCCTTTCACATCA 248547 ||||| ||||| || || ||||||| || | | | ||||||||| || ||| || Sbjct 9153 CATGGTCAAAAGGGTACTATTGGTATCACATATCGTAGAGAAGATATGCCATTTACAGCA 9212 Query 248548 GAAGGTATGACTCCAGATTTAATTTTCAATCCACATGGTATGCCTACACGTATGACTATG 248607 |||||||| |||||||||||| ||||||| |||| ||| || | ||||||||| || Sbjct 9213 GAAGGTATCGTACCAGATTTAATTATCAATCCTCATGCTATTCCATCTCGTATGACTGTG 9272 Query 248608 GGACAATTA 248616 | || ||| Sbjct 9273 GCGCATTTA 9281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975617524140380