Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F000732305.1_202014-07-21] 3,985 sequences; 11,595,011 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq2589 145 9e-30 seq3120 100 4e-16 >seq2589 Length=927 Score = 145 bits (160), Expect = 9e-30 Identities = 453/690 (66%), Gaps = 26/690 (4%) Strand=Plus/Plus Query 112299 CAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAAT 112358 ||||| || ||||||||||| | | | ||||||| || || |||||| || || Sbjct 176 CAAACGGAAACTGGTACACCCTTTGTTGTTTACAAGGATGCTTGTAACAGGAAATCCAAC 235 Query 112359 CAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACA 112418 |||||||| |||||||| |||||| || ||| | || ||||| | |||| | Sbjct 236 CAAAAGAACTTGGGTGTTATCAAGTCGTCTAACTTGTGCTGTGAAATTGTTGAATACTCC 295 Query 112419 GACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCC--CAAGTATGTGG 112476 | ||||||||| ||||| |||||| | || || | ||| | || || ||| || Sbjct 296 GCTCCAGATGAGACTGCTGTTTGTAACTTGGCTTCTGTTGCTTTGCCAGCATTTAT-TGA 354 Query 112477 ATCC-----AGA-GACAAAG-----ACATTTGATTATGAAAAACTCCACGAAGTTACGAA 112525 | | ||| | |||| |||| | | | |||| || || ||| || | || Sbjct 355 AACATCTGAAGACGGCAAAACTTCTACATATAACTTCAAAAAGCTACATGAAATTTCTAA 414 Query 112526 AACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGC 112585 | | |||| ||| |||||| |||||||| | || | ||| || || ||| || Sbjct 415 AGTTATCACTCGTAACTTAAACAACGTTATTGACCGTAACTATTATCCTGTCGAGGAAGC 474 Query 112586 TCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGT 112645 | | |||||||||||||||| | || |||| | | |||||||||||| | || || Sbjct 475 AAGAAGATCTAATATGAGACACAGGCCGATTGCTTTGGGTGTCCAAGGTTTGGCTGACAC 534 Query 112646 ATTCATTCTTTGTCGC---CACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCG 112702 ||||| |||| || || |||| || ||||| ||||| | | ||| | Sbjct 535 TTTCAT--GTTGTTGCGTTTAC-CATTCGACTCCGAAGAAGCACGCTTACTAAATATACA 591 Query 112703 TATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGA 112762 || ||||| || ||||| || || | | || || || ||| | || | || Sbjct 592 AATCTTTGAAACCATGTACCATGCTTCCATGGAAGCCTCTTGTGAGCTAGCTCAAAGAGA 651 Query 112763 TGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATAT 112822 ||| ||||| |||||||| | || ||||||||||| ||||| | |||||||| || || Sbjct 652 TGGCCCATACGAAACCTTCCAAGGCTCTCCAGCTTCTCAAGGTATACTTCAATTCGACAT 711 Query 112823 GTGGGAAGGTGAGACCAAGCTTCACTACGACTGGGACGCTCTCAAGGAACG-CATCAAGG 112881 |||||| | | | | | | || ||||| || | || || | ||||| | Sbjct 712 GTGGGACGAAAAACCTTACGGTATGTGGGATTGGGATACT-TTGAGAAATGACATCATGA 770 Query 112882 AGAAGGGTCTTCGTAACAGTCTTT--TGATGGCACCAATGCCAACAGCCTCCACCGCACA 112939 || | ||| || | ||| ||||| |||||||| ||||| || || ||||| | || Sbjct 771 AGCATGGTGTTAGAAAC--TCTTTGACCATGGCACCTATGCCTACTGCATCCACTTCCCA 828 Query 112940 AATCTTGGGTAATAATGAATGCTTTGAACC 112969 || || ||| | || || || || ||||| Sbjct 829 GATTTTAGGTTACAACGAGTGTTTCGAACC 858 >seq3120 Length=488 Score = 100 bits (110), Expect = 4e-16 Identities = 173/249 (69%), Gaps = 2/249 (1%) Strand=Plus/Minus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 ||||| || | ||||| | ||||| | ||||| || || || | ||||| | | | Sbjct 350 CCACAACACTTAATCATGAGAGTCGCCTTAGGTATTCACGGTGATAACATTGAGGCCGCT 291 Query 111672 TTGGAGACATACGACAAGATGTCCCGTGGTATG-TTCATCCACGCAACACCAACCCTCTT 111730 | || || || || |||||||| | || || | ||||| | ||||| | || Sbjct 290 CTAGAAACCTATAACTTGATGTCCC-TAAAATACTTTACTCACGCCTCTCCAACTTTATT 232 Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790 ||||||||||||||||| || ||||||||| |||||||| |||||| ||||| || Sbjct 231 CAACGCTGGTACACCAAAGCCTCAAATGTCCTCCTGTTTCCTAGTTGCAATGAAGGATGA 172 Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGG 111850 ||| || | || || |||| |||| | | |||||||| || || || ||||| Sbjct 171 TTCCATTGAAGGTATCTACGACACTTTGAAGGAATGTGCTTTGATTTCCAAAACTGCTGG 112 Query 111851 TGGTATCGG 111859 |||||| || Sbjct 111 TGGTATTGG 103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620711479269200