Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F000732305.1_202014-07-21] 3,985 sequences; 11,595,011 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq1567 176 5e-39 seq2589 125 8e-24 seq3120 84.2 3e-11 >seq1567 Length=2367 Score = 176 bits (194), Expect = 5e-39 Identities = 897/1414 (63%), Gaps = 47/1414 (3%) Strand=Plus/Plus Query 109752 GTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGA 109811 ||| ||||| | ||| ||||||||||||||||||| || || ||||| | || || Sbjct 388 GTACATGTTTGAAGTGACTGGTTCGAAACACTCATTGTACCCAAGAATTTGGGATGTTGA 447 Query 109812 AGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTACCCGCTC 109871 ||| || ||||| || |||||| | | ||||| | |||| | || || || || Sbjct 448 AGCGGTTGGCATTGGGGCCATGGTTAAAGAGTTTCTTA-ACCCAT-GT-TTCACAATGTC 504 Query 109872 ACGCATT---GCGTCCCAATCATAACGACCACTAAATTTAGTCTCACCATCCCACATATC 109928 | | | ||||||||| | ||| ||| | || | ||| |||||| || Sbjct 505 CTTCTTCAAAGTGTCCCAATCCCACATGCCA---AAT---GGCTTAGCATTCCACATGTC 558 Query 109929 TGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAAC 109988 || | | ||||| || |||||||| || | ||| | || || || Sbjct 559 GAACTGTAAAATACCCTTAGAGGCAGGAGAGCCTTCAAAAGTGGAATATTTACCTTCCTT 618 Query 109989 CTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAATATGAGC 110048 | || ||||| | ||||| || || | ||||| || ||||| || ||||| || Sbjct 619 TTGAGCTAACTCACAAGAAGCTTCAAGGGTAGCATGGTAAATAGTTTCGAAAATTTGTTT 678 Query 110049 ATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAGAATAAACACATCCGC 110108 ||| | | ||| | |||||| || || || | || | ||| | ||| || Sbjct 679 ATTAAGTATTTGAGCTTTTTCACATTCAAATGGTAAACGCAGCATCATATAAGTATCGGC 738 Query 110109 TAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTC 110168 | ||| ||||| || || |||| || | ||| |||||||||||| || ||| | Sbjct 739 CAAACCTTGAACCCCCAGGGCAATAGGTCTATGTTTCATGTTAGAGTTTCTAGCCTCTGG 798 Query 110169 TACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGAT 110228 || || ||| |||| ||||||||||| | ||| | || | || | || | || Sbjct 799 CACTGGATAATAGTTACGGTCGATGACTCTATTCAAGTTATGAGTGATGACTTTAGCAAT 858 Query 110229 TTCATGGAGTTTGTCGTAATCGAA------CGTTTT--CGTCTCCTTA----TTGACATA 110276 ||||| | | | | ||| | | |||||| | ||| | | | || | Sbjct 859 GTCATGTAAACTTTGGAAATTGTAGGTCGCCGTTTTACCATCTTCCGAAGTCTCAACGAA 918 Query 110277 TTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTC 110336 | || |||||||| || || | ||| || |||| ||| || ||| | | || || Sbjct 919 TGCTGGTAGAGCAATGGAAGCTAAATTACAAACAGCAGTTTCATCTGGGGAAGAATACTC 978 Query 110337 CAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTT 110396 | ||||| ||||||||| || || ||| ||||| ||||| || || | || Sbjct 979 GACGATTTCGCAACACAAGTTTGACGATTTGATGGTACCCAGGTTCTGTTGGTTGGTCTT 1038 Query 110397 GGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAG 110456 ||| || ||||||||||| | |||| | || ||||| ||||| || |||| |||| Sbjct 1039 TCTGTTACAGGCATCCTTATAAACCATGAAGGGTGTACCGGTTTCTGTTTGTG-CTTGCA 1097 Query 110457 A-ATGGCCTTCCATACATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGT 110515 | ||||| | |||||| | || || ||| ||| | ||||||| |||| Sbjct 1098 AGATGGCGTACCATACCTTTTGAGCCTTGATGGTT---TTACCACGACCTTCTCTTTCGT 1154 Query 110516 ACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGC----C 110571 | ||| || | || || ||||| | || | || || | ||| || | Sbjct 1155 AACGGGTATATAGCTCTTCGAATTCTTCACCCCAAACGTCGTCCAAACCTGGGGCAGCAC 1214 Query 110572 TTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCA 110631 ||| | |||| | || ||| ||| |||| || || | ||||||||| || || Sbjct 1215 TTGGTG----AGAATAAGGTCCAGGCCCCATCCTCTTCGACACGCTTCATGAAAAGATCG 1270 Query 110632 GGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGG 110691 |||||||| | || | ||| | || | |||| ||||| | ||| || | Sbjct 1271 GGAATCCATAGAGCAGGGAACAAATCTCTTGCACGAATTTCTTCCTTACCATGAGTCTTT 1330 Query 110692 CGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGA-GATA--GACA---GCG 110745 | | || | |||||| | ||| || | |||||||| || | || | | || || Sbjct 1331 CTGATATCGACAAAGTCGAAGATGTCTGCATGCCATGGCTCCAAGAAAAGGGCAAAGGCA 1390 Query 110746 ATGGATCCCTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTG 110805 || || ||| || ||| |||| || || ||||| ||| |||||||| | | Sbjct 1391 CCGGGTCTCTTGTTACCACCT---TGGTCCACGTAACGTGCAGTGTTGTTGAAGACACGG 1447 Query 110806 AGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCA 110865 | ||| ||||| | || | || ||| || ||||| ||| || ||| | Sbjct 1448 ATCATGGGAATCAACCCGTTTGAAGTACCGTTGGTACCTGCAATATAAGAGCCTGTGGAA 1507 Query 110866 CGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACACTCT 110925 ||||| | || |||||| | ||||| |||||| || ||| ||| ||||||||| Sbjct 1508 CGAATATTGTTGATATGAAGACCAACACCACCTGCAGTCTTGGAAATCATGGCACACTCT 1567 Query 110926 GTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAA 110985 | | || | |||||||| ||||| || || |||| ||||||| || || |||||| Sbjct 1568 TTCAAAGTGTCGTAAATACCTTCAATGGAGTCGTCCTTCATGGCAATCAGGAAACAAGAA 1627 Query 110986 GACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGA 111045 ||||| |||||| | ||||| || ||||| || ||||| || | || || |||| Sbjct 1628 GACATTTGAGGATGTGGCGTACCGGCATTAAATAGTGTGGGGGAAGCGTGGGTGAAGTAT 1687 Query 111046 CCTTGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATACCA 111105 | |||||| |||||| || | || |||| | ||| | ||||||||||| Sbjct 1688 CTCAACGACATCAAGTTGTAAGTCTTCAGCACGGACTCGATATCGCTGCCGTGAATACCT 1747 Query 111106 ATGGCAACTCGCATGAACATATATTGAGG-CGTT 111138 | ||| || ||||||| || || ||| || |||| Sbjct 1748 AGGGCCACACGCATGACCAAATGTTGGGGACGTT 1781 >seq2589 Length=927 Score = 125 bits (138), Expect = 8e-24 Identities = 481/749 (64%), Gaps = 20/749 (3%) Strand=Plus/Minus Query 109714 TTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGT 109773 ||||| || ||||||||||| || || || ||| ||||| | || ||| Sbjct 915 TTGACGACTTGAAATTCACCAGATAGAACACGACGAGAGTACATGTTGGAAGTAACTGGT 856 Query 109774 TCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATG 109833 ||||||||||| |||| |||| || || | |||||| || || ||||| || |||||| Sbjct 855 TCGAAACACTCGTTGTAACCTAAAATCTGGGAAGTGGATGCAGTAGGCATAGGTGCCATG 796 Query 109834 AGAAGACTGTTTCGGAGACCCTTCGTCTTTACCCGCTCACGCATTGCGTCCCAATCATAA 109893 | | ||||| | ||| | | || | | | | || | |||||||| | Sbjct 795 GTCAAAGAGTTTCTAACACCATGCTTCATGATGTCATTTCTCAAAGTATCCCAATCCCAC 736 Query 109894 CGACCACTAAATTTAGTCTCACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCA 109953 ||| ||| || || |||||||| || |||||||| ||| | || ||| Sbjct 735 ATACCG-TAAGGTTTTTCG-----TCCCACATGTCGAATTGAAGTATACCTTGAGAAGCT 682 Query 109954 GGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCT 110013 ||||| || | ||| | ||||| | || || | || | ||| | || || || Sbjct 681 GGAGAGCCTTGGAAGGTTTCGTATGGGCCATCTCTTTGAGCTAGCTCACAAGAGGCTTCC 622 Query 110014 AGTGCCGCATGATACATAGTCTCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAG 110073 | | ||||| ||||| || ||||| || || ||| | | ||| | ||||| || Sbjct 621 ATGGAAGCATGGTACATGGTTTCAAAGATTTGTATATTTAGTAAGCGTGCTTCTTCGGAG 562 Query 110074 TCGAAGGGAAGACCACAAAGAATAAACACATCCGCTAGACCCTGAACACCGAGACCAATG 110133 ||||| || | || | | || || || || | ||| || ||||| | | |||| Sbjct 561 TCGAATGGTAAACGCAACAACATGAAAGTGTCAGCCAAACCTTGGACACCCAAAGCAATC 502 Query 110134 GGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATG 110193 || | || |||| ||||| | || || || || || ||| |||| ||||| || Sbjct 501 GGCCTGTGTCTCATATTAGATCTTCTTGCTTCCTCGACAGGATAATAGTTACGGTCAATA 442 Query 110194 ACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATTTCATGGAG---TTTGTCGTAATC- 110249 || || | || || | | || | |||||||| || |||| || || Sbjct 441 ACGTTGTTTAAGTTACGAGTGATAACTTTAGAAATTTCATGTAGCTTTTTGAAGTTATAT 382 Query 110250 ---GAACGTTTT--CGTCTCCTTAT--TGACATATTTG--GGGAGAGCAATAGACGCAAG 110300 ||| ||||| ||||| | || | ||| || || | ||||| ||| || | Sbjct 381 GTAGAA-GTTTTGCCGTCTTCAGATGTTTCAATAAATGCTGGCAAAGCAACAGAAGCCAA 323 Query 110301 ATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGA 110360 || || |||| |||||| ||| ||| |||||| | |||||| |||||||| || Sbjct 322 GTTACAAACAGCAGTCTCATCTGGAGCGGAGTATTCAACAATTTCACAGCACAAGTTAGA 263 Query 110361 ACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAG 110420 ||| || |||||||||||||| || || ||||| ||| || |||||||| || | Sbjct 262 CGACTTGATAACACCCAAGTTCTTTTGGTTGGATTTCCTGTTACAAGCATCCTTGTAAAC 203 Query 110421 CATGTATGGGGTACCAGTTTCCGTCTGTG 110449 | | || |||||||||||||| |||| Sbjct 202 AACAAAGGGTGTACCAGTTTCCGTTTGTG 174 >seq3120 Length=488 Score = 84.2 bits (92), Expect = 3e-11 Identities = 174/259 (67%), Gaps = 0/259 (0%) Strand=Plus/Plus Query 110863 GCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACAC 110922 |||||||||| ||| ||||| | |||||||||||| || || ||| ||||| Sbjct 79 GCACGAATGTTGTGAATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACAT 138 Query 110923 TCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAA 110982 || | | || | || ||||| ||||| ||||| |||| | |||| ||| || || Sbjct 139 TCCTTCAAAGTGTCGTAGATACCTTCAATGGAATCATCCTTCATTGCAACTAGGAAACAG 198 Query 110983 GAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAAC 111042 || ||||| ||||| || || || || ||||| | || || | || ||| | || Sbjct 199 GAGGACATTTGAGGCTTTGGTGTACCAGCGTTGAATAAAGTTGGAGAGGCGTGAGTAAAG 258 Query 111043 AGACCTTGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATA 111102 | |||||||| ||| || || || || |||| | | | |||||||||| Sbjct 259 TATTTTAGGGACATCAAGTTATAGGTTTCTAGAGCGGCCTCAATGTTATCACCGTGAATA 318 Query 111103 CCAATGGCAACTCGCATGA 111121 || | ||| |||| ||||| Sbjct 319 CCTAAGGCGACTCTCATGA 337 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588946661633000