Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F000732305.1_202014-07-21] 3,985 sequences; 11,595,011 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq2589 145 9e-30 seq1567 141 1e-28 >seq2589 Length=927 Score = 145 bits (160), Expect = 9e-30 Identities = 454/691 (66%), Gaps = 24/691 (3%) Strand=Plus/Minus Query 105953 GGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCC 106012 ||||| || || || || | ||| || || || | ||||| || || ||||| |||||| Sbjct 858 GGTTCGAAACACTCGTTGTAACCTAAAATCTGGGAAGTGGATGCAGTAGGCATAGGTGCC 799 Query 106013 ATCA--AAAGACTGTTACGAAGACCCTTTTCCTTGATG-CGTTCCTTGAGAACATCCCAG 106069 || ||||| ||| | || ||| | | | ||||| | || || | | |||||| Sbjct 798 ATGGTCAAAGA--GTTTCTAACACCATGCTTCATGATGTCATTTCTCAA-AGTATCCCAA 742 Query 106070 TCGTAGTTGAGCTT--GGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACG 106127 || | | | | | ||||| | | ||||||| || |||||||| | ||||| || | Sbjct 741 TCCCACAT-ACCGTAAGGTTTTTCGT-CCCACATGTCGAATTGAAGTATACCTTGAGAAG 684 Query 106128 TGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCT 106187 ||||| || | || || || || | || | || ||| | ||||| || | Sbjct 683 CTGGAGAGCCTTGGAAGGTTTCGTATGGGCCATCTCTTTGAGCTAGCTCACAAGAGGCTT 624 Query 106188 CCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCA-TCTCCTTGGCTTCATCT 106246 ||| ||| || || ||||||||||||||||| | ||| | | | | ||||| || Sbjct 623 CCATGGAAGCATGGTACATGGTTTCAAAGATTTGTATATTTAGTAAGCGT-GCTTCTTCG 565 Query 106247 GAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCA 106306 || || |||| | || |||| || || || || | |||||| ||||||||| || Sbjct 564 GAGTCGAATGGTAAACGCAACAACATGAAAGTGTCAGCCAAACCTTGGACACCCAAAGCA 505 Query 106307 ATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCA 106366 || || ||||||| ||||||||| ||| || ||| || |||||| | || | |||| Sbjct 504 ATCGGCCTGTGTCTCATATTAGATCTTCTTGCTTCCTCGACAGGATAATAGTTACGGTCA 445 Query 106367 ATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCA 106426 || || ||||| || || | || || | |||||||| || |||| | | | Sbjct 444 ATAACGTTGTTTAAGTTACGAGTGATAACTTTAGAAATTTCATGTAGCTTTTTGAAGTTA 385 Query 106427 AAAGTGCGAGT------CTCTTCA----TTGACATACTT--TGGAAGGGCGATTGATGCC 106474 | || ||| |||||| || ||| | ||| | || | || ||| Sbjct 384 TATGTAGAAGTTTTGCCGTCTTCAGATGTTTCAATAAATGCTGGCAAAGCAACAGAAGCC 325 Query 106475 AAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTG 106534 || || |||||||| |||||||| | | | ||| || | |||||| |||||||| Sbjct 324 AAGTTACAAACAGCAGTCTCATCTGGAGCGGAGTATTCAACAATTTCACAGCACAAGTTA 265 Query 106535 GAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAG 106594 || ||| || ||||| ||||||||||| || |||| || ||||||||||| Sbjct 264 GACGACTTGATAACACCCAAGTTCTTTTGGTTGGATTTCCTGTTACAAGCATCCTTGTAA 205 Query 106595 AGCATGTAGGGCGTCCCCGTCTCCGTCTGTG 106625 | | |||| || || || ||||| |||| Sbjct 204 ACAACAAAGGGTGTACCAGTTTCCGTTTGTG 174 >seq1567 Length=2367 Score = 141 bits (156), Expect = 1e-28 Identities = 556/863 (64%), Gaps = 16/863 (2%) Strand=Plus/Plus Query 106456 TGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAA 106515 ||| || || || || || ||||| |||||||| || ||||| | ||||| | Sbjct 922 TGGTAGAGCAATGGAAGCTAAATTACAAACAGCAGTTTCATCTGGGGAAGAATACTCGAC 981 Query 106516 AATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTT 106575 ||||| ||||||||| || || || || |||| |||| |||||| ||||| | Sbjct 982 GATTTCGCAACACAAGTTTGACGATTTGATGGTACCCAGGTTCTGTTGGTTGGTCTTTCT 1041 Query 106576 GTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGA-A 106634 ||| || |||||||| || | |||| |||| || || || || || |||| |||| | | Sbjct 1042 GTTACAGGCATCCTTATAAACCATGAAGGGTGTACCGGTTTCTGTTTGTG-CTTGCAAGA 1100 Query 106635 TTGCCTTCCACACATCG-GCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTAC 106693 | || | ||| || | | | || | |||| || | || || || ||||| Sbjct 1101 TGGCGTACCATACCTTTTGAGCCTTG----ATGGTTTTACCACGACCTTCTCTTTCGTAA 1156 Query 106694 TTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCT 106753 || || || |||| || || |||||| ||||| | |||||| || | Sbjct 1157 CGGGTATATAGCTCTTCGAATTCTTCACCCCAAACGTCGTCCAAACCTGGGGCAGCACTT 1216 Query 106754 GGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATC 106813 || |||| | | ||| ||| |||| || || |||||||||||||| || |||||| Sbjct 1217 GGTGAGAATAAGGTCCAGGCCCCATCCTCTTCGACACGCTTCATGAAAAGATCGGGAATC 1276 Query 106814 CACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAAC 106873 || || | | || | |||||| ||| ||||| | ||| || | || | Sbjct 1277 CATAGAGCAGGGAACAAATCTCTTGCACGAATTTCTTCCTTACCATGAGTCTTTCTGATA 1336 Query 106874 TCAAGGAACTCCATGATATCCGCGTGCCATGGCTC-AAGATAGACTGCGATAGATCC--- 106929 || | || || | ||| || || ||||||||||| |||| | | || | | || Sbjct 1337 TCGACAAAGTCGAAGATGTCTGCATGCCATGGCTCCAAGAAA-AGGGCAAAGGCACCGGG 1395 Query 106930 -CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTG 106988 || | | || | |||| | || || || || ||| ||| || || || | ||| | Sbjct 1396 TCTCTTGTTACC-ACCTTGGTCCACGTAACGTGCAGTGTTGTTGAAGACACGGATCATGG 1454 Query 106989 GAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACAT 107048 |||| | || | ||| ||| || || || |||| ||| ||| | | || Sbjct 1455 GAATCAACCCGTTTGAAGTACCGTTGGTACCTGCAATATAAGAGCCTGTGGAACGAATAT 1514 Query 107049 CATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAG 107108 | ||| || | |||| ||| || || ||| || || |||||||| | | || Sbjct 1515 TGTTGATATGAAGACCAACACCACCTGCAGTCTTGGAAATCATGGCACACTCTTTCAAAG 1574 Query 107109 TTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCT 107168 | | || ||||| | || ||||| ||||| |||| || ||||| ||| ||||| | Sbjct 1575 TGTCGTAAATACCTTCAATGGAGTCGTCCTTCATGGCAATCAGGAAACAAGAAGACATTT 1634 Query 107169 GCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGG- 107227 | || ||| ||||| ||||| || || || || | ||||| |||| || || Sbjct 1635 GAGGATGTGGCGTACCGGCATTAAATAGTGTGGGGGAAGCGTGGGTGAAG-TATCTCAAC 1693 Query 107228 GACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCC 107287 |||||| || ||| |||| || || || || || || ||||| || || | |||| Sbjct 1694 GACATCAAGTTGTAAGTCTTCAGCACGGACTCGATATCGCTGCCGTGAATACCTAGGGCC 1753 Query 107288 ACACGCATAAACATGTATTGGGG 107310 |||||||| | || | |||||| Sbjct 1754 ACACGCATGACCAAATGTTGGGG 1776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589951411581400