Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F000732305.1_202014-07-21] 3,985 sequences; 11,595,011 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq23 116 4e-21 >seq23 Length=17058 Score = 116 bits (128), Expect = 4e-21 Identities = 180/257 (70%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 153205 TTATAGGTCAAGGATACTATGGAACCATTACACCCCCAGTCATACAGCGAAACGTTCTTG 153264 |||| ||| | || || || || || ||| ||| ||||| || || ||||| | | | Sbjct 3700 TTATTGGTAAGGGTTATTACGGCACGATTTTACCGCCAGTAATTCAAAGAAACCTATTGG 3759 Query 153265 AGAATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGAT 153324 | | ||| ||||| || ||||||||||| || || |||| ||||| ||||| |||| Sbjct 3760 AAAGTCCAGAATGGTATACTTCTTACACTCCTTACCAGCCTGAAATATCGCAGGGTAGAT 3819 Query 153325 TGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTTACAGGATTACCAATAGCAA 153384 ||||||||||| | || | ||||| | | | || || || || || || | |||| Sbjct 3820 TGGAAGCTTTACTAAACTTTCAAACAGTGGTTTCCGATCTGACTGGTTTGCCTGTGGCAA 3879 Query 153385 ACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATGCTATTAGCATATAATT 153444 |||| || | || ||||||| ||||| || | ||||| |||||| | ||| ||| Sbjct 3880 ACGCTTCATTGTTGGATGAAGGTACTGCGGCTGGTGAAGCTATGCTACTGTCATTCAATA 3939 Query 153445 CTACAAGAGATAAGAAG 153461 || | ||| | || ||| Sbjct 3940 CTTCCAGAAAGAAAAAG 3956 Score = 116 bits (128), Expect = 4e-21 Identities = 157/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 153768 CAAAGGTTTGGTATTCCTATGGGATATGGAGGTCCTCATGCTGCATTCTTTGCAACAACA 153827 ||||| || ||| |||||||||| ||||| |||||||||||||| || || || | Sbjct 4284 CAAAGATTCGGTGTTCCTATGGGTTATGGTGGTCCTCATGCTGCCTTTTTCGCCGTTATT 4343 Query 153828 GACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGATAGTGAAGGT 153887 || ||| || ||||| || |||||||||||||| ||| ||| || | |||| Sbjct 4344 GATAAGCTGAACAGAAAAATCCCTGGCAGAATTGTTGGTGTGTCCAAGGACCGCCTAGGT 4403 Query 153888 AATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCA 153947 |||| || | |||| |||| |||||||| || || |||| | | || |||||| Sbjct 4404 AATACTGCCCTGCGTCTAGCTTTACAAACTAGAGAACAACACATCAAGCGTGATAAAGCA 4463 Query 153948 ACCAGTAACATCTGCACAGCTCAGGCACTGCTGGCTAAT 153986 || ||||| ||||| ||||| || || |||||||| Sbjct 4464 ACTTCAAACATTTGCACCGCTCAAGCCCTTTTGGCTAAT 4502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579183947962400