Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F000732305.1_202014-07-21] 3,985 sequences; 11,595,011 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq23 111 2e-19 >seq23 Length=17058 Score = 111 bits (122), Expect = 2e-19 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 158443 CAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCATGCTGCATTCTTTGCAACAACA 158502 ||||| || ||| |||||||||| || || |||||||||||||| || || || | Sbjct 4284 CAAAGATTCGGTGTTCCTATGGGTTATGGTGGTCCTCATGCTGCCTTTTTCGCCGTTATT 4343 Query 158503 GACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGATAGCGAAGGT 158562 || ||| || ||||| || |||||||||||||| ||| ||| || || |||| Sbjct 4344 GATAAGCTGAACAGAAAAATCCCTGGCAGAATTGTTGGTGTGTCCAAGGACCGCCTAGGT 4403 Query 158563 AATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAAGCA 158622 |||| || | |||| |||| |||||||| || || |||| | || |||||| Sbjct 4404 AATACTGCCCTGCGTCTAGCTTTACAAACTAGAGAACAACACATCAAGCGTGATAAAGCA 4463 Query 158623 ACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAAT 158661 || ||||| ||||| || ||||| || |||||||| Sbjct 4464 ACTTCAAACATTTGCACCGCTCAAGCCCTTTTGGCTAAT 4502 Score = 104 bits (114), Expect = 3e-17 Identities = 177/257 (69%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 157880 TTATAGGTCAAGGATACTATGGAACCATCACACCCCCAGTCATACAGCGAAACGTTCTTG 157939 |||| ||| | || || || || || || ||| ||||| || || ||||| | | | Sbjct 3700 TTATTGGTAAGGGTTATTACGGCACGATTTTACCGCCAGTAATTCAAAGAAACCTATTGG 3759 Query 157940 AGAATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGAT 157999 | | ||| ||||| || ||||||||||| || || |||| ||||| ||||| |||| Sbjct 3760 AAAGTCCAGAATGGTATACTTCTTACACTCCTTACCAGCCTGAAATATCGCAGGGTAGAT 3819 Query 158000 TGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCGATAGCAA 158059 ||||||||||| | || | ||||| | | | || || || || | || | |||| Sbjct 3820 TGGAAGCTTTACTAAACTTTCAAACAGTGGTTTCCGATCTGACTGGTTTGCCTGTGGCAA 3879 Query 158060 ACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATGCTGTTAGCATATAATT 158119 |||| || | || ||||||| ||||| || | ||||| ||||| | ||| ||| Sbjct 3880 ACGCTTCATTGTTGGATGAAGGTACTGCGGCTGGTGAAGCTATGCTACTGTCATTCAATA 3939 Query 158120 CTACAAGAGATAAGAAG 158136 || | ||| | || ||| Sbjct 3940 CTTCCAGAAAGAAAAAG 3956 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588021907699600