Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F000732305.1_202014-07-21] 3,985 sequences; 11,595,011 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq714 179 3e-39 seq3164 143 2e-28 seq2882 143 2e-28 seq1291 141 7e-28 seq3230 118 9e-21 seq3413 114 1e-19 seq1898 114 1e-19 seq3193 107 2e-17 seq1976 86.0 5e-11 >seq714 Length=5238 Score = 179 bits (198), Expect = 3e-39 Identities = 376/552 (68%), Gaps = 15/552 (3%) Strand=Plus/Plus Query 368593 ATTTCAAGAAGTAGGTTTTGGGGAACTCCAATTCCAGTATGGAAATCTGATGATGGTGAA 368652 || || |||| ||| | |||||| |||||||| ||| ||||| || || ||| ||| Sbjct 2117 ATCTCCAGAAATAGATATTGGGGTACTCCAATCCCATTATGGGTTTCCGACGATTTCGAA 2176 Query 368653 GAAATTGTTTGTATAGGTTCAATTAAAGAATTGCAAGAATTATCTGGTGTGCAAAATATT 368712 ||| |||||||| | ||||| | ||||||||| ||||| | ||||||| |||| Sbjct 2177 GAAGTTGTTTGTGTTGGTTCTGTCAAAGAATTGGAAGAACTGACTGGTGTCTCCGGTATT 2236 Query 368713 AGTGATTTACATATTGATAAAATTGATCACATTAAAATTCCATCAAAGAAAGGAAAAGGT 368772 | || || ||| ||||| |||||| | || | ||||||||| || |||| || ||| Sbjct 2237 ACAGACTTGCATCGTGATATCATTGATAAGATGACAATTCCATCTAAACAAGGTAAGGGT 2296 Query 368773 TTATTGTCTCGAGTTGAAGGAGTTTTGGATTGCTGGTTTGAATCAGGTTCTATGCCTTAT 368832 ||| || | |||| |||||| || || ||||| ||||||||||| |||||||| Sbjct 2297 GACTTGAAGAGAATCGAAGAAGTTTTTGACTGTTGGTTCGAATCAGGTTCCATGCCTTAC 2356 Query 368833 GGTCAAATACATTATCCATTTGATAACGCAAAATACTTTGATAATGATAAAGATTATGTG 368892 | | |||||||||||| || |||| || | ||| | | | ||| | | Sbjct 2357 GCTTCTCAACATTATCCATTCGAGAACGTTGAAAAATTTAA-----ACAGAGAGT-TCCA 2410 Query 368893 GCTGATTTTGTAACAGAATCAATTGATCAAACACGTGGTTGGTTTTATACCCTATTAGTA 368952 ||| |||| | | ||| | ||||||||| | ||||||||||| || || || Sbjct 2411 GCTAATTTCATTTCTGAAGGTTTAGATCAAACAAGAGGTTGGTTTTACACTTTAAGTGTC 2470 Query 368953 TTATCCA-CAGCTATTTTCGATAAACCGGCTTTTAAAAATGTAATAGTAACTGGTATTGT 369011 || | || || ||| | || ||| || || || || || | |||||||| Sbjct 2471 TTGGGTACCATCTGTTTGGCACTGTCC--CTTACAAGAACGTCATCGTTTCGGGTATTGT 2528 Query 369012 TAATGCATCTGATGGTCAAAAGATGTCAAAA--AGTAAGGGTAATTATTCCGATCCTAAT 369069 | || ||||| ||| ||| ||||| ||| ||| | ||||| ||||||| Sbjct 2529 TCTAGCTTCTGACGGTAGAAAAATGTCCAAATCCTTAAAG--AATTACCCCGATCCACTC 2586 Query 369070 ATTTTAATTGATAAATTTGGTGCTGATACTTTGAGATTATACCT-ATTGTCATCACCTGT 369128 ||| | | || |||| ||||||||| |||||||||| ||| | ||| | |||||||| Sbjct 2587 ATTGTTTTAGACAAATACGGTGCTGATGCTTTGAGATTGTACTTGATTAAC-TCACCTGT 2645 Query 369129 AGTAAAAGCAGA 369140 | ||||| || Sbjct 2646 CTTGAAAGCTGA 2657 >seq3164 Length=471 Score = 143 bits (158), Expect = 2e-28 Identities = 303/446 (68%), Gaps = 6/446 (1%) Strand=Plus/Minus Query 552015 AGGGCCAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAA 552074 || || | ||| ||||| | || ||||| | || ||| |||| | |||||||| ||| Sbjct 443 AGAGCAAGATTCGAAGAACTGTGCGCTGATTTATTCAGATCAACATTAGAACCAGTGGAA 384 Query 552075 CAAGTTTTAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGT 552134 |||| | | ||||| ||| | || |||||| || | |||||||||| || || ||| Sbjct 383 AAAGTGCTGACTGATTCCAAGCTGGACAAATCCCAAATCGATGAAATTGTTCTAGTCGGT 324 Query 552135 GGATCTACAAGAATTCCTAAAATTCGCGAAAT--GTTAAGTTCTTATTTCAATGGTAAAA 552192 |||||||| |||||| | || || | ||| | ||| ||| ||||| |||||| Sbjct 323 GGATCTACTAGAATTTCCAAGATAC-AGAAGTTGGTTTCCAGCTT-CTTCAACGGTAAAG 266 Query 552193 AATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAG 552252 || ||| | || || ||||| ||||||||||| ||||| ||| |||| |||| Sbjct 265 AACCCAATCGTTCCATCAACCCGGATGAAGCTGTTGCCTACGGTGCTGCAGTTCAGGCAG 206 Query 552253 CTATTCTTTCTGGACA-AACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACT 552311 |||| ||| |||| | | | | |||||| ||| || || | | |||||||| | Sbjct 205 CTATCCTTACTGGCGATCAGTCAACAAAAAC-ACAGGATCTTCTTTTACTAGATGTTGCG 147 Query 552312 CCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAAT 552371 || | || | || | ||||| | || ||||| |||||||| || || ||||||| Sbjct 146 CCATTGTCCCAAGGAATTGAAACTGCGGGGGGTATCATGACTAAACTGATTCCTAGAAAT 87 Query 552372 ACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCT 552431 | || || || || ||||| ||||| || || |||| || ||| | | Sbjct 86 TCAACAATCCCAACCAAGAAATCGGAAACTTTTTCGACCTACGCAGACAACCAACCAGGC 27 Query 552432 GTTACAATTCAAATTTTTGAAGGAGA 552457 ||| |||||| | |||||||| || Sbjct 26 GTTTTGATTCAAGTCTTTGAAGGTGA 1 >seq2882 Length=644 Score = 143 bits (158), Expect = 2e-28 Identities = 384/576 (67%), Gaps = 37/576 (6%) Strand=Plus/Minus Query 549967 ATAAGATATAATGTCAAACAAAGTAGCTATAGGTATAGATTTAGGAACCACATATAGTTG 550026 |||| || |||||||||| ||| | ||||| |||||||| || || ||| || Sbjct 623 ATAACAT-TAATGTCAAA------AGCAGTTGGTATCGATTTAGGTACAACCTATTCATG 571 Query 550027 TGTTGGTGTTTGGCAAAATGGTAAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAAC 550086 ||||| | || ||| | || ||| || ||||| || ||||| |||||||||||||| Sbjct 570 TGTTGCTCATTTCTCAAACGATAGAGTGGAGATTATCGCTAATGACCAAGGTAACAGAAC 511 Query 550087 TACTCCATCTTATGTTTCTTTCACGGAAACTGAACATTTAGTTGGTGATGCAGCAAAATA 550146 || || || || || | || || || || ||| || ||||||| || || || | Sbjct 510 GACACCTTCGTACGTAGCATTTACTGACACCGAAAGACTAATTGGTGACGCTGCTAAGAA 451 Query 550147 TCAAGC--CACTGGTAATCCTACCAATACTATTTTTGATGCTAAACGTTTAATTGGAAGA 550204 |||||| || || ||||| |||||| |||| |||||||||||||| || || | Sbjct 450 TCAAGCTGCAATG--AATCCACACAATACGGTTTTCGATGCTAAACGTTTGATAGGTCGT 393 Query 550205 AGTTTTAATGATTCGACTGTTCAGGCAGATATGAAGCATTGGCCTTTCCAA---ATTGTT 550261 | ||| | ||| | || | ||| || |||| || ||| || || | Sbjct 392 AAGTTTGACGATCCAGAAGTAACGAGTGATGCTAAACATTACCCATTCAAAGTGATCGAC 333 Query 550262 AATGTTTCTGGAAAACCTTATATTGAAGCTACT--CAT-GAAGGATCTGTTAAACAA--- 550315 || | || ||||| | || || | | || |||| || |||| | Sbjct 332 AAAG---GAGGCAAACC----AGTGGTGCAAGTGGAATATAAGG----GTGAAACCAAGA 284 Query 550316 --TTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGC-CAGT 550372 ||| | ||||| ||||||| |||||| | |||| || ||||| |||| || || Sbjct 283 CTTTTACTCCAGAGGAAATTTCCTCTATGATCTTAACAAAGATGAAGGAAACTGCTGAGA 224 Query 550373 GCTTTTGTTGGTCA-AGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGA 550431 || | |||| || | |||| | ||||| || |||| || || || ||||| || || Sbjct 223 ACTAT--TTGGGCACAAAAGTAAACGATGCTGTGGTAACGGTTCCGGCTTATTTCAACGA 166 Query 550432 CTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTAT 550491 |||||| | ||||| || || ||||| || ||||| || | ||||| | ||||| Sbjct 165 TTCACAAAGACAAGCAACCAAGGATGCCGGTACAATTGCCGGTTTAAATGTCTTACGTAT 106 Query 550492 TATCAATGAACCTACTGCTGCTGCACTTGCATATGG 550527 ||| ||||||||||| ||||| || |||| || || Sbjct 105 TATTAATGAACCTACCGCTGCCGCTATTGCCTACGG 70 >seq1291 Length=2983 Score = 141 bits (156), Expect = 7e-28 Identities = 367/556 (66%), Gaps = 20/556 (4%) Strand=Plus/Plus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 |||| | ||||| ||||| ||||| || ||| ||||| | | || |||| | Sbjct 2285 AGCTGTCGGTATTGATTTGGGAACAACTTATTCGTGTGTCGCTCATTTTTCCAATGACAG 2344 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 || ||||| ||||| ||||| |||||||| || || || ||||| || || | || || Sbjct 2345 GGTAGAAATCATTGCAAATGACCAAGGTAATAGGACCACCCCATCATACGTGGCGTTTAC 2404 Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAA 550170 || || || ||| |||||||||| || || ||||||| | |||||| ||| Sbjct 2405 TGACACGGAGAGATTAATTGGTGATGCCGCCAAGAATCAAGCTGCAATCAATCCTCACAA 2464 Query 550171 TACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGC 550230 ||| | || ||||| ||||| ||||| || | | ||| | ||| | || | | Sbjct 2465 TACAGTCTTCGATGCAAAACGGTTAATCGGCCGTAAATTTGACGATCCTGAAGTGACGAC 2524 Query 550231 AGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGC 550290 ||| ||||||| || ||| | || | || || || | | || || Sbjct 2525 TGATGCCAAGCATTTTCCGTTCAAGATCATA------TCCAGAGAAGGTAAACCTGTAGT 2578 Query 550291 TACTCATGAAGGATCT----GTTAAACAA-----TTTTCACCAGAACAAATTTCATCTAT 550341 || | || || | || |||||| ||| |||| || |||| || || || Sbjct 2579 C---CAAGTAGAATATAAAGGTGAAACAAAGACCTTTACACCTGAGGAAATATCTTCAAT 2635 Query 550342 GGTTTTAATGAAAATGAAACAAACAGCC-AGTGCTTTTGTTGGTCAAGAAGTTACGGATG 550400 ||| || || || ||||| |||| || || || | || | | || | |||| Sbjct 2636 GGTGTTGATCAAGATGAAGGAAACTGCGGAGAACTATCTGGGGACTACT-GTGAATGATG 2694 Query 550401 CAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTG 550460 | || |||| || || || ||||| ||||| || ||| | ||||| || || ||||| | Sbjct 2695 CTGTGGTAACCGTTCCCGCCTATTTCAATGATTCTCAAAGACAAGCCACCAAGGATGCAG 2754 Query 550461 GACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTG 550520 | |||||| || | |||||||| |||||||| |||||||||||||| |||||| ||| Sbjct 2755 GGACTATTGCAGGTATGAATGTTCTGCGTATTATTAATGAACCTACTGCAGCTGCAATTG 2814 Query 550521 CATATGGACTTGATAA 550536 | || || | ||||| Sbjct 2815 CTTACGGCTTGGATAA 2830 >seq3230 Length=432 Score = 118 bits (130), Expect = 9e-21 Identities = 293/437 (67%), Gaps = 12/437 (3%) Strand=Plus/Plus Query 551799 CATCTTGGTGGCGAAGATTTTGATAATAGACTGGT--ATCATGGTGTGTTGAAGATTTTA 551856 ||| | ||||| |||||||||||||| ||| |||| | || | | |||| || | Sbjct 2 CATTTGGGTGGTGAAGATTTTGATAACAGATTGGTCAACCAC--TTCATCCAAGAATTCA 59 Query 551857 AACGAAAAAACAAAGTTGATCTATCTACATCTGCCAAAGCTCTTCGTC--GTCTAAGAAC 551914 | |||| ||||| || | ||||| | |||||| ||| | | | ||||| Sbjct 60 AGAGAAAGAACAAGAAGGACTTGTCTAC--CAACCAAAGAGCTTTGAGAAGATTGAGAAC 117 Query 551915 TGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAAGTAGA 551974 ||||| ||||||||||| || || | || ||| | |||||||| || | ||| | || Sbjct 118 CGCTTGTGAAAGAGCCAAGAGAACTTTGTCTTCTTCTGCTCAAACCTCTGTGGAAATCGA 177 Query 551975 TTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAAGATAT 552034 || || || || || |||| | | || | || | || |||| ||| ||||| | Sbjct 178 CTCTTTGTTCGAAGGTGTTGACTTCTACACTTCCATCACCAGAGCCAGATTCGAAGAATT 237 Query 552035 TTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGATTCAAA 552094 ||| |||| | || ||| || | || ||||| ||| | || || |||||| | || Sbjct 238 GTGTGCTGACTTATTCAGATCTACTTTGGACCCAGTCGAAAAGGTCTTGAGAGATGCTAA 297 Query 552095 GATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAA 552154 | | || ||||| |||| | ||||| || | |||||||| ||||| |||||||| || Sbjct 298 GTTGGACAAATCACAAGTGGACGAAATCGTCTTGGTTGGTGGTTCTACTAGAATTCC-AA 356 Query 552155 AATTCGCGAAA--TGTTAAGTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTAAT 552212 | || | ||| || | | || ||||| ||||| || ||| | | |||| Sbjct 357 AGGTC-CAAAAGTTGGTTACCGACTACTTCAACGGTAAGGAACCAAACAGATCTATTAAC 415 Query 552213 CCAGATGAGGCTGTTGC 552229 |||||||| || ||||| Sbjct 416 CCAGATGAAGCCGTTGC 432 >seq3413 Length=356 Score = 114 bits (126), Expect = 1e-19 Identities = 141/193 (73%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 ||||| ||||||||||| || |||||||||||||| || ||||||| |||| | ||||| Sbjct 7 GTTGACATTATTGCCAACGACCAAGGTAACAGAACCACCCCATCTTTTGTTGCCTTCACA 66 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171 || |||||| | |||||||||| || || | ||||| || |||||| | || Sbjct 67 GACACTGAAAGACTGATTGGTGATGCCGCTAAGAACCAAGCTGCTATGAATCCTTCGAAC 126 Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231 ||| | || || || || ||||| || || |||| || || || | || || | Sbjct 127 ACTGTGTTCGACGCCAAGCGTTTGATCGGTAGAAACTTCAACGACCCAGAAGTGCAAGGT 186 Query 550232 GATATGAAGCATT 550244 ||||||||||||| Sbjct 187 GATATGAAGCATT 199 >seq1898 Length=1803 Score = 114 bits (126), Expect = 1e-19 Identities = 128/171 (75%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 549994 TATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGT 550053 ||| ||||| ||||| || || || ||| ||||||| |||| | |||| ||||| Sbjct 460 TATTGGTATCGATTTGGGTACTACGTATTCCTGTGTTGCTGTTATGAAAAACGGTAAGAC 401 Query 550054 TGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGA 550113 ||||||| |||||||||| |||||||| |||| |||||||||||||| ||||||| || Sbjct 400 TGAAATTCTTGCCAATGAACAAGGTAATAGAATAACTCCATCTTATGTGGCTTTCACCGA 341 Query 550114 AACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCC 550164 ||| || |||||||||| ||||| | ||| | ||| ||| || Sbjct 340 CGAGGAAAGGTTGATTGGTGATGCTGCAAAGAACCAAATCGCTGCTAACCC 290 >seq3193 Length=455 Score = 107 bits (118), Expect = 2e-17 Identities = 184/263 (70%), Gaps = 7/263 (3%) Strand=Plus/Plus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 ||||| ||||| |||||||| || || || |||||||| | || || | | Sbjct 10 GCTATCGGTATCGATTTAGGTACAACCTACTCTTGTGTTGCTACTTACGAA--TCCTCC- 66 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 ||||||||||||||||| || |||||||||||| || ||||||| || ||||||| Sbjct 67 GTTGAAATTATTGCCAACGAACAAGGTAACAGAGTCACCCCATCTTTCGTCGCTTTCACT 126 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171 | ||| || | |||||||| || || ||||||| || || || | || Sbjct 127 CCAGAAGAAAGATTGATCGGTGATGCTGCCAAGAATCAAGCTGCTTTGAACCCAAGAAAC 186 Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGA--CTGTTCAGG 550229 ||| | || |||||||| ||||| ||||| ||||| || | || ||| |||| || Sbjct 187 ACTGTCTTCGATGCTAAGCGTTTGATTGGTAGAAGATTCGACGA--CGAATCTGTCCAAA 244 Query 550230 CAGATATGAAGCATTGGCCTTTC 550252 ||||||||| ||||||||| Sbjct 245 AGGATATGAAGACCTGGCCTTTC 267 >seq1976 Length=1684 Score = 86.0 bits (94), Expect = 5e-11 Identities = 182/272 (67%), Gaps = 0/272 (0%) Strand=Plus/Minus Query 552303 GATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATC 552362 || || |||||| |||| | || | ||||| | ||||| || | |||| | || Sbjct 954 GACGTCACTCCTTTATCGTTAGGAATTGAAACCCTCGGAGGCGTTTTCACTAGATTAATT 895 Query 552363 GATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAAT 552422 |||||| | || ||||| ||| ||||| | ||||||| || ||| | Sbjct 894 CCAAGAAATTCCACGATTCCCACTAAGAAATCCCAAATATTTTCCACTGCCGCAGCAGGT 835 Query 552423 CAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAAT 552482 ||||| | || | || || ||||| | || || || | || || |||||||| Sbjct 834 CAAACAACAGTAGAAGTTAAAGTTTTTCAGGGCGAGAGGGAGTTAGTCAAGGATAATAAA 775 Query 552483 CAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATT 552542 | |||||| ||| | | ||||| ||||| || || || || || || |||||| Sbjct 774 TTAATTGGTAATTTCTCTCTCGAAGGAATTCCACCAGCACCAAAAGGTGTTCCCCAAATT 715 Query 552543 GAAGTTACTTTCGATATCGATGCCAATGGAAT 552574 ||||| ||||| ||||| |||||||||||||| Sbjct 714 GAAGTCACTTTTGATATTGATGCCAATGGAAT 683 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029085255227650