Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F000732305.1_202014-07-21]
3,985 sequences; 11,595,011 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq714 179 3e-39
seq3164 143 2e-28
seq2882 143 2e-28
seq1291 141 7e-28
seq3230 118 9e-21
seq3413 114 1e-19
seq1898 114 1e-19
seq3193 107 2e-17
seq1976 86.0 5e-11
>seq714
Length=5238
Score = 179 bits (198), Expect = 3e-39
Identities = 376/552 (68%), Gaps = 15/552 (3%)
Strand=Plus/Plus
Query 368593 ATTTCAAGAAGTAGGTTTTGGGGAACTCCAATTCCAGTATGGAAATCTGATGATGGTGAA 368652
|| || |||| ||| | |||||| |||||||| ||| ||||| || || ||| |||
Sbjct 2117 ATCTCCAGAAATAGATATTGGGGTACTCCAATCCCATTATGGGTTTCCGACGATTTCGAA 2176
Query 368653 GAAATTGTTTGTATAGGTTCAATTAAAGAATTGCAAGAATTATCTGGTGTGCAAAATATT 368712
||| |||||||| | ||||| | ||||||||| ||||| | ||||||| ||||
Sbjct 2177 GAAGTTGTTTGTGTTGGTTCTGTCAAAGAATTGGAAGAACTGACTGGTGTCTCCGGTATT 2236
Query 368713 AGTGATTTACATATTGATAAAATTGATCACATTAAAATTCCATCAAAGAAAGGAAAAGGT 368772
| || || ||| ||||| |||||| | || | ||||||||| || |||| || |||
Sbjct 2237 ACAGACTTGCATCGTGATATCATTGATAAGATGACAATTCCATCTAAACAAGGTAAGGGT 2296
Query 368773 TTATTGTCTCGAGTTGAAGGAGTTTTGGATTGCTGGTTTGAATCAGGTTCTATGCCTTAT 368832
||| || | |||| |||||| || || ||||| ||||||||||| ||||||||
Sbjct 2297 GACTTGAAGAGAATCGAAGAAGTTTTTGACTGTTGGTTCGAATCAGGTTCCATGCCTTAC 2356
Query 368833 GGTCAAATACATTATCCATTTGATAACGCAAAATACTTTGATAATGATAAAGATTATGTG 368892
| | |||||||||||| || |||| || | ||| | | | ||| | |
Sbjct 2357 GCTTCTCAACATTATCCATTCGAGAACGTTGAAAAATTTAA-----ACAGAGAGT-TCCA 2410
Query 368893 GCTGATTTTGTAACAGAATCAATTGATCAAACACGTGGTTGGTTTTATACCCTATTAGTA 368952
||| |||| | | ||| | ||||||||| | ||||||||||| || || ||
Sbjct 2411 GCTAATTTCATTTCTGAAGGTTTAGATCAAACAAGAGGTTGGTTTTACACTTTAAGTGTC 2470
Query 368953 TTATCCA-CAGCTATTTTCGATAAACCGGCTTTTAAAAATGTAATAGTAACTGGTATTGT 369011
|| | || || ||| | || ||| || || || || || | ||||||||
Sbjct 2471 TTGGGTACCATCTGTTTGGCACTGTCC--CTTACAAGAACGTCATCGTTTCGGGTATTGT 2528
Query 369012 TAATGCATCTGATGGTCAAAAGATGTCAAAA--AGTAAGGGTAATTATTCCGATCCTAAT 369069
| || ||||| ||| ||| ||||| ||| ||| | ||||| |||||||
Sbjct 2529 TCTAGCTTCTGACGGTAGAAAAATGTCCAAATCCTTAAAG--AATTACCCCGATCCACTC 2586
Query 369070 ATTTTAATTGATAAATTTGGTGCTGATACTTTGAGATTATACCT-ATTGTCATCACCTGT 369128
||| | | || |||| ||||||||| |||||||||| ||| | ||| | ||||||||
Sbjct 2587 ATTGTTTTAGACAAATACGGTGCTGATGCTTTGAGATTGTACTTGATTAAC-TCACCTGT 2645
Query 369129 AGTAAAAGCAGA 369140
| ||||| ||
Sbjct 2646 CTTGAAAGCTGA 2657
>seq3164
Length=471
Score = 143 bits (158), Expect = 2e-28
Identities = 303/446 (68%), Gaps = 6/446 (1%)
Strand=Plus/Minus
Query 552015 AGGGCCAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAA 552074
|| || | ||| ||||| | || ||||| | || ||| |||| | |||||||| |||
Sbjct 443 AGAGCAAGATTCGAAGAACTGTGCGCTGATTTATTCAGATCAACATTAGAACCAGTGGAA 384
Query 552075 CAAGTTTTAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGT 552134
|||| | | ||||| ||| | || |||||| || | |||||||||| || || |||
Sbjct 383 AAAGTGCTGACTGATTCCAAGCTGGACAAATCCCAAATCGATGAAATTGTTCTAGTCGGT 324
Query 552135 GGATCTACAAGAATTCCTAAAATTCGCGAAAT--GTTAAGTTCTTATTTCAATGGTAAAA 552192
|||||||| |||||| | || || | ||| | ||| ||| ||||| ||||||
Sbjct 323 GGATCTACTAGAATTTCCAAGATAC-AGAAGTTGGTTTCCAGCTT-CTTCAACGGTAAAG 266
Query 552193 AATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAG 552252
|| ||| | || || ||||| ||||||||||| ||||| ||| |||| ||||
Sbjct 265 AACCCAATCGTTCCATCAACCCGGATGAAGCTGTTGCCTACGGTGCTGCAGTTCAGGCAG 206
Query 552253 CTATTCTTTCTGGACA-AACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACT 552311
|||| ||| |||| | | | | |||||| ||| || || | | |||||||| |
Sbjct 205 CTATCCTTACTGGCGATCAGTCAACAAAAAC-ACAGGATCTTCTTTTACTAGATGTTGCG 147
Query 552312 CCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAAT 552371
|| | || | || | ||||| | || ||||| |||||||| || || |||||||
Sbjct 146 CCATTGTCCCAAGGAATTGAAACTGCGGGGGGTATCATGACTAAACTGATTCCTAGAAAT 87
Query 552372 ACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCT 552431
| || || || || ||||| ||||| || || |||| || ||| | |
Sbjct 86 TCAACAATCCCAACCAAGAAATCGGAAACTTTTTCGACCTACGCAGACAACCAACCAGGC 27
Query 552432 GTTACAATTCAAATTTTTGAAGGAGA 552457
||| |||||| | |||||||| ||
Sbjct 26 GTTTTGATTCAAGTCTTTGAAGGTGA 1
>seq2882
Length=644
Score = 143 bits (158), Expect = 2e-28
Identities = 384/576 (67%), Gaps = 37/576 (6%)
Strand=Plus/Minus
Query 549967 ATAAGATATAATGTCAAACAAAGTAGCTATAGGTATAGATTTAGGAACCACATATAGTTG 550026
|||| || |||||||||| ||| | ||||| |||||||| || || ||| ||
Sbjct 623 ATAACAT-TAATGTCAAA------AGCAGTTGGTATCGATTTAGGTACAACCTATTCATG 571
Query 550027 TGTTGGTGTTTGGCAAAATGGTAAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAAC 550086
||||| | || ||| | || ||| || ||||| || ||||| ||||||||||||||
Sbjct 570 TGTTGCTCATTTCTCAAACGATAGAGTGGAGATTATCGCTAATGACCAAGGTAACAGAAC 511
Query 550087 TACTCCATCTTATGTTTCTTTCACGGAAACTGAACATTTAGTTGGTGATGCAGCAAAATA 550146
|| || || || || | || || || || ||| || ||||||| || || || |
Sbjct 510 GACACCTTCGTACGTAGCATTTACTGACACCGAAAGACTAATTGGTGACGCTGCTAAGAA 451
Query 550147 TCAAGC--CACTGGTAATCCTACCAATACTATTTTTGATGCTAAACGTTTAATTGGAAGA 550204
|||||| || || ||||| |||||| |||| |||||||||||||| || || |
Sbjct 450 TCAAGCTGCAATG--AATCCACACAATACGGTTTTCGATGCTAAACGTTTGATAGGTCGT 393
Query 550205 AGTTTTAATGATTCGACTGTTCAGGCAGATATGAAGCATTGGCCTTTCCAA---ATTGTT 550261
| ||| | ||| | || | ||| || |||| || ||| || || |
Sbjct 392 AAGTTTGACGATCCAGAAGTAACGAGTGATGCTAAACATTACCCATTCAAAGTGATCGAC 333
Query 550262 AATGTTTCTGGAAAACCTTATATTGAAGCTACT--CAT-GAAGGATCTGTTAAACAA--- 550315
|| | || ||||| | || || | | || |||| || |||| |
Sbjct 332 AAAG---GAGGCAAACC----AGTGGTGCAAGTGGAATATAAGG----GTGAAACCAAGA 284
Query 550316 --TTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGC-CAGT 550372
||| | ||||| ||||||| |||||| | |||| || ||||| |||| || ||
Sbjct 283 CTTTTACTCCAGAGGAAATTTCCTCTATGATCTTAACAAAGATGAAGGAAACTGCTGAGA 224
Query 550373 GCTTTTGTTGGTCA-AGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGA 550431
|| | |||| || | |||| | ||||| || |||| || || || ||||| || ||
Sbjct 223 ACTAT--TTGGGCACAAAAGTAAACGATGCTGTGGTAACGGTTCCGGCTTATTTCAACGA 166
Query 550432 CTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTAT 550491
|||||| | ||||| || || ||||| || ||||| || | ||||| | |||||
Sbjct 165 TTCACAAAGACAAGCAACCAAGGATGCCGGTACAATTGCCGGTTTAAATGTCTTACGTAT 106
Query 550492 TATCAATGAACCTACTGCTGCTGCACTTGCATATGG 550527
||| ||||||||||| ||||| || |||| || ||
Sbjct 105 TATTAATGAACCTACCGCTGCCGCTATTGCCTACGG 70
>seq1291
Length=2983
Score = 141 bits (156), Expect = 7e-28
Identities = 367/556 (66%), Gaps = 20/556 (4%)
Strand=Plus/Plus
Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050
|||| | ||||| ||||| ||||| || ||| ||||| | | || |||| |
Sbjct 2285 AGCTGTCGGTATTGATTTGGGAACAACTTATTCGTGTGTCGCTCATTTTTCCAATGACAG 2344
Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110
|| ||||| ||||| ||||| |||||||| || || || ||||| || || | || ||
Sbjct 2345 GGTAGAAATCATTGCAAATGACCAAGGTAATAGGACCACCCCATCATACGTGGCGTTTAC 2404
Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAA 550170
|| || || ||| |||||||||| || || ||||||| | |||||| |||
Sbjct 2405 TGACACGGAGAGATTAATTGGTGATGCCGCCAAGAATCAAGCTGCAATCAATCCTCACAA 2464
Query 550171 TACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGC 550230
||| | || ||||| ||||| ||||| || | | ||| | ||| | || | |
Sbjct 2465 TACAGTCTTCGATGCAAAACGGTTAATCGGCCGTAAATTTGACGATCCTGAAGTGACGAC 2524
Query 550231 AGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGC 550290
||| ||||||| || ||| | || | || || || | | || ||
Sbjct 2525 TGATGCCAAGCATTTTCCGTTCAAGATCATA------TCCAGAGAAGGTAAACCTGTAGT 2578
Query 550291 TACTCATGAAGGATCT----GTTAAACAA-----TTTTCACCAGAACAAATTTCATCTAT 550341
|| | || || | || |||||| ||| |||| || |||| || || ||
Sbjct 2579 C---CAAGTAGAATATAAAGGTGAAACAAAGACCTTTACACCTGAGGAAATATCTTCAAT 2635
Query 550342 GGTTTTAATGAAAATGAAACAAACAGCC-AGTGCTTTTGTTGGTCAAGAAGTTACGGATG 550400
||| || || || ||||| |||| || || || | || | | || | ||||
Sbjct 2636 GGTGTTGATCAAGATGAAGGAAACTGCGGAGAACTATCTGGGGACTACT-GTGAATGATG 2694
Query 550401 CAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTG 550460
| || |||| || || || ||||| ||||| || ||| | ||||| || || ||||| |
Sbjct 2695 CTGTGGTAACCGTTCCCGCCTATTTCAATGATTCTCAAAGACAAGCCACCAAGGATGCAG 2754
Query 550461 GACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTG 550520
| |||||| || | |||||||| |||||||| |||||||||||||| |||||| |||
Sbjct 2755 GGACTATTGCAGGTATGAATGTTCTGCGTATTATTAATGAACCTACTGCAGCTGCAATTG 2814
Query 550521 CATATGGACTTGATAA 550536
| || || | |||||
Sbjct 2815 CTTACGGCTTGGATAA 2830
>seq3230
Length=432
Score = 118 bits (130), Expect = 9e-21
Identities = 293/437 (67%), Gaps = 12/437 (3%)
Strand=Plus/Plus
Query 551799 CATCTTGGTGGCGAAGATTTTGATAATAGACTGGT--ATCATGGTGTGTTGAAGATTTTA 551856
||| | ||||| |||||||||||||| ||| |||| | || | | |||| || |
Sbjct 2 CATTTGGGTGGTGAAGATTTTGATAACAGATTGGTCAACCAC--TTCATCCAAGAATTCA 59
Query 551857 AACGAAAAAACAAAGTTGATCTATCTACATCTGCCAAAGCTCTTCGTC--GTCTAAGAAC 551914
| |||| ||||| || | ||||| | |||||| ||| | | | |||||
Sbjct 60 AGAGAAAGAACAAGAAGGACTTGTCTAC--CAACCAAAGAGCTTTGAGAAGATTGAGAAC 117
Query 551915 TGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAAGTAGA 551974
||||| ||||||||||| || || | || ||| | |||||||| || | ||| | ||
Sbjct 118 CGCTTGTGAAAGAGCCAAGAGAACTTTGTCTTCTTCTGCTCAAACCTCTGTGGAAATCGA 177
Query 551975 TTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAAGATAT 552034
|| || || || || |||| | | || | || | || |||| ||| ||||| |
Sbjct 178 CTCTTTGTTCGAAGGTGTTGACTTCTACACTTCCATCACCAGAGCCAGATTCGAAGAATT 237
Query 552035 TTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGATTCAAA 552094
||| |||| | || ||| || | || ||||| ||| | || || |||||| | ||
Sbjct 238 GTGTGCTGACTTATTCAGATCTACTTTGGACCCAGTCGAAAAGGTCTTGAGAGATGCTAA 297
Query 552095 GATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAA 552154
| | || ||||| |||| | ||||| || | |||||||| ||||| |||||||| ||
Sbjct 298 GTTGGACAAATCACAAGTGGACGAAATCGTCTTGGTTGGTGGTTCTACTAGAATTCC-AA 356
Query 552155 AATTCGCGAAA--TGTTAAGTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTAAT 552212
| || | ||| || | | || ||||| ||||| || ||| | | ||||
Sbjct 357 AGGTC-CAAAAGTTGGTTACCGACTACTTCAACGGTAAGGAACCAAACAGATCTATTAAC 415
Query 552213 CCAGATGAGGCTGTTGC 552229
|||||||| || |||||
Sbjct 416 CCAGATGAAGCCGTTGC 432
>seq3413
Length=356
Score = 114 bits (126), Expect = 1e-19
Identities = 141/193 (73%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111
||||| ||||||||||| || |||||||||||||| || ||||||| |||| | |||||
Sbjct 7 GTTGACATTATTGCCAACGACCAAGGTAACAGAACCACCCCATCTTTTGTTGCCTTCACA 66
Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171
|| |||||| | |||||||||| || || | ||||| || |||||| | ||
Sbjct 67 GACACTGAAAGACTGATTGGTGATGCCGCTAAGAACCAAGCTGCTATGAATCCTTCGAAC 126
Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231
||| | || || || || ||||| || || |||| || || || | || || |
Sbjct 127 ACTGTGTTCGACGCCAAGCGTTTGATCGGTAGAAACTTCAACGACCCAGAAGTGCAAGGT 186
Query 550232 GATATGAAGCATT 550244
|||||||||||||
Sbjct 187 GATATGAAGCATT 199
>seq1898
Length=1803
Score = 114 bits (126), Expect = 1e-19
Identities = 128/171 (75%), Gaps = 0/171 (0%)
Strand=Plus/Minus
Query 549994 TATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGT 550053
||| ||||| ||||| || || || ||| ||||||| |||| | |||| |||||
Sbjct 460 TATTGGTATCGATTTGGGTACTACGTATTCCTGTGTTGCTGTTATGAAAAACGGTAAGAC 401
Query 550054 TGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGA 550113
||||||| |||||||||| |||||||| |||| |||||||||||||| ||||||| ||
Sbjct 400 TGAAATTCTTGCCAATGAACAAGGTAATAGAATAACTCCATCTTATGTGGCTTTCACCGA 341
Query 550114 AACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCC 550164
||| || |||||||||| ||||| | ||| | ||| ||| ||
Sbjct 340 CGAGGAAAGGTTGATTGGTGATGCTGCAAAGAACCAAATCGCTGCTAACCC 290
>seq3193
Length=455
Score = 107 bits (118), Expect = 2e-17
Identities = 184/263 (70%), Gaps = 7/263 (3%)
Strand=Plus/Plus
Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051
||||| ||||| |||||||| || || || |||||||| | || || | |
Sbjct 10 GCTATCGGTATCGATTTAGGTACAACCTACTCTTGTGTTGCTACTTACGAA--TCCTCC- 66
Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111
||||||||||||||||| || |||||||||||| || ||||||| || |||||||
Sbjct 67 GTTGAAATTATTGCCAACGAACAAGGTAACAGAGTCACCCCATCTTTCGTCGCTTTCACT 126
Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171
| ||| || | |||||||| || || ||||||| || || || | ||
Sbjct 127 CCAGAAGAAAGATTGATCGGTGATGCTGCCAAGAATCAAGCTGCTTTGAACCCAAGAAAC 186
Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGA--CTGTTCAGG 550229
||| | || |||||||| ||||| ||||| ||||| || | || ||| |||| ||
Sbjct 187 ACTGTCTTCGATGCTAAGCGTTTGATTGGTAGAAGATTCGACGA--CGAATCTGTCCAAA 244
Query 550230 CAGATATGAAGCATTGGCCTTTC 550252
||||||||| |||||||||
Sbjct 245 AGGATATGAAGACCTGGCCTTTC 267
>seq1976
Length=1684
Score = 86.0 bits (94), Expect = 5e-11
Identities = 182/272 (67%), Gaps = 0/272 (0%)
Strand=Plus/Minus
Query 552303 GATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATC 552362
|| || |||||| |||| | || | ||||| | ||||| || | |||| | ||
Sbjct 954 GACGTCACTCCTTTATCGTTAGGAATTGAAACCCTCGGAGGCGTTTTCACTAGATTAATT 895
Query 552363 GATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAAT 552422
|||||| | || ||||| ||| ||||| | ||||||| || ||| |
Sbjct 894 CCAAGAAATTCCACGATTCCCACTAAGAAATCCCAAATATTTTCCACTGCCGCAGCAGGT 835
Query 552423 CAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAAT 552482
||||| | || | || || ||||| | || || || | || || ||||||||
Sbjct 834 CAAACAACAGTAGAAGTTAAAGTTTTTCAGGGCGAGAGGGAGTTAGTCAAGGATAATAAA 775
Query 552483 CAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATT 552542
| |||||| ||| | | ||||| ||||| || || || || || || ||||||
Sbjct 774 TTAATTGGTAATTTCTCTCTCGAAGGAATTCCACCAGCACCAAAAGGTGTTCCCCAAATT 715
Query 552543 GAAGTTACTTTCGATATCGATGCCAATGGAAT 552574
||||| ||||| ||||| ||||||||||||||
Sbjct 714 GAAGTCACTTTTGATATTGATGCCAATGGAAT 683
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4029085255227650
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |