Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F000732305.1_202014-07-21] 3,985 sequences; 11,595,011 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq2084 150 3e-31 >seq2084 Length=1521 Score = 150 bits (166), Expect = 3e-31 Identities = 476/731 (65%), Gaps = 15/731 (2%) Strand=Plus/Minus Query 47840 TGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCC 47899 |||||||| ||||| || || |||||||| ||||| || |||| || ||||| ||| Sbjct 1210 TGGTAGTCGGAGACTCTCTTTTCGAAGAAGTTGGTCTTACCGGCCAAGGAAATGTTTTCC 1151 Query 47900 ATGAAGAGGAAGGGGTTGGGTGTGTTATACACC--CGTGTCAGGCCCATCTGTTCCAGCA 47957 ||||| |||||||||| || || | | ||| | || | ||| | Sbjct 1150 ATGAAATCGAAGGGGTTGTCGACCTTGTAGTACTTCTTGTTA--CCGAAGGCGACCAAAA 1093 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 | || |||||| |||||| ||||| ||| | | | |||||| |||| | || Sbjct 1092 GTCTGTCTGCGACGAACTCGACGTATTGGTTCATCAAGTCGGCGTTCATACCTAGCAAGG 1033 Query 48018 ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCT-CTATCTGCACGGCTTCCCCCACAATC 48076 || ||||| || | | || | || || | | |||| ||||| || || || Sbjct 1032 CGACTGGCAAGGCGTCTAGGAAGTA-TCTTTGTTCGATCTCGACGGCCTCGGTGACGATT 974 Query 48077 TGCTTAACGCGGGACTCTGAG---GGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAG 48133 | || ||| || ||| | || ||||| || ||| ||| | | || ||| Sbjct 973 TTCTCGACGATGG---CTGGGTCCGGCTTGTTTTTCAAGTG---GGCGAACAACAAACAG 920 Query 48134 GCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCA 48193 |||||||| ||||||| |||||||| | || ||| || ||||||||||| | ||| Sbjct 919 GCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAGATCAGTTCGTTGGAGAAGGTCAAACCG 860 Query 48194 GGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATG 48253 ||||| | || || | || | |||||| || | ||||| || || || ||||||| Sbjct 859 GGCATCATACCTCTTTTCTTCAACCAGAAGATGGAGGCGAAGGACCCGGAAAAGAAGACA 800 Query 48254 CCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATC 48313 || || | | ||||||||| || || || ||||| || | ||| |||| Sbjct 799 CCTTCGATGGAGGCGAACGCGACCAGTCTTTCACCGAACAGGGCATCGGCGTCCTGGATC 740 Query 48314 CAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAG 48373 || ||| ||||| || ||||||| ||| ||| || || || ||||| ||| Sbjct 739 CATCTAAGGGCCCATTCGGCCTTCTCGCAGATTTCTGGGATGGTGTCGATGGCGTTGAAC 680 Query 48374 AGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCA 48433 | || || || | |||| | ||||| || || | | ||| | || Sbjct 679 AAGAACTCGCTTTCCTTGGGGTCCTTGATGTAGGTGTCGATCAACAAGGAGTAGGTTTCG 620 Query 48434 GAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGC 48493 ||||| | ||||| || |||||||||||||||||||| | ||||||| | ||| Sbjct 619 GAGTGGATGTTCTCGATTGCGATCTGGAACCCGTAGAAACTCTTGGCCTCCGGGATCTGG 560 Query 48494 ACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAG 48553 || || |||||||| |||| | || || || ||||| || || || || || || ||| Sbjct 559 ACCTCGGTGGAGAAGTTCTCGACCAAGTTTTCGTTGACGATACCGTCGGAGGCGGCGAAG 500 Query 48554 AAGGCAAGGAC 48564 |||||||| || Sbjct 499 AAGGCAAGCAC 489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931486398022400