Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F000732305.1_202014-07-21]
3,985 sequences; 11,595,011 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq2589 181 1e-40
seq3120 82.4 9e-11
>seq2589
Length=927
Score = 181 bits (200), Expect = 1e-40
Identities = 475/713 (67%), Gaps = 24/713 (3%)
Strand=Plus/Plus
Query 75894 AATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGA 75953
|| |||| ||||| ||||| ||||| | | | ||||||||||||||||||||| |||
Sbjct 171 AAGCACAAACGGAAACTGGTACACCCTTTGTTGTTTACAAGGATGCTTGTAACAGGAAAT 230
Query 75954 GTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGT 76013
||||||||||| ||||| |||||| || || | ||| |||||| | || |
Sbjct 231 CCAACCAAAAGAACTTGGGTGTTATCAAGTCGTCTAACTTGTGCTGTGAAATTGTTGAAT 290
Query 76014 ACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCA--AAGTA 76071
|| | | | |||||||| |||||||| || ||||| || | || | ||| | ||
Sbjct 291 ACTCCGCTCCAGATGAGACTGCTGTTTGTAACTTGGCTTCTGTTGCTTTGCCAGCATTTA 350
Query 76072 TGTCAA----TGAAGAG------ACTCGCACTTTTGATTATGAAAAACTTCATGAAATCA 76121
| || |||||| ||| || | | | | |||| || ||||||||
Sbjct 351 TTGAAACATCTGAAGACGGCAAAACTTCTACATATAACTTCAAAAAGCTACATGAAATTT 410
Query 76122 CAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCCCGTTGAGA 76181
| || || | || || ||||| || |||||| | || | |||||| || |||
Sbjct 411 CTAAAGTTATCACTCGTAACTTAAACAACGTTATTGACCGTAACTATTATCCTGTCGAGG 470
Query 76182 CTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGG 76241
|| ||| ||||||||| ||||||| || |||| ||||||||| |||||| | || |
Sbjct 471 AAGCAAGAAGATCTAATATGAGACACAGGCCGATTGCTTTGGGTGTCCAAGGTTTGGCTG 530
Query 76242 ATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGATGAAGCCAAGGAGA-TGAATGCT 76300
| || || |||| || | |||| || || || ||||| | | | | |||
Sbjct 531 ACACTTTCATGTTGTTGCGTTTACCATTCGACTCCGAAGAAGC-ACGCTTACTAAATATA 589
Query 76301 CGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCC 76360
| ||||||||||||||||| || || ||| |||| || |||||| | ||| ||
Sbjct 590 CAAATCTTTGAAACCATGTACCATGCTTCCATGGAAGCCTCTTGTGAGCTAGCTCAAAGA 649
Query 76361 CAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGAT 76420
| || | || || || || | || ||||| || || ||||| | ||||| || ||
Sbjct 650 GATGGCCCATACGAAACCTTCCAAGGCTCTCCAGCTTCTCAAGGTATACTTCAATTCGAC 709
Query 76421 ATGTGGGAAGGTGAAACC--AAGCTCAACTACGACTGGGATGTTCTCAAGGAACG-CATC 76477
||||||| | | ||||| | | | | | || |||||| | | || || | ||||
Sbjct 710 ATGTGGG-ACGAAAAACCTTACGGT-ATGTGGGATTGGGATACT-TTGAGAAATGACATC 766
Query 76478 AAGGAGAAGGGTCTTCGTAACAGTCTTT--TGATGGCACCAATGCCAACAGCCTCCACCG 76535
| | || | ||| || | ||| ||||| |||||||| ||||| || || |||||
Sbjct 767 ATGAAGCATGGTGTTAGAAAC--TCTTTGACCATGGCACCTATGCCTACTGCATCCACTT 824
Query 76536 CACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACATCTAC 76588
| || || || ||| | || || || || |||||| || | ||||| |||
Sbjct 825 CCCAGATTTTAGGTTACAACGAGTGTTTCGAACCAGTTACTTCCAACATGTAC 877
>seq3120
Length=488
Score = 82.4 bits (90), Expect = 9e-11
Identities = 169/249 (68%), Gaps = 2/249 (1%)
Strand=Plus/Minus
Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271
||||| || | ||||| | ||||| | || || ||||| || ||||||| | |
Sbjct 350 CCACAACACTTAATCATGAGAGTCGCCTTAGGTATTCACGGTGATAACATTGAGGCCGCT 291
Query 75272 TTGGAGACATACGACAAGATGTCCC-AAGGTATGTTCATTCACGCAACACCAACCCTCTT 75330
| || || || || |||||||| || || || | |||||| | ||||| | ||
Sbjct 290 CTAGAAACCTATAACTTGATGTCCCTAAAATACTTT-ACTCACGCCTCTCCAACTTTATT 232
Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390
||| ||||||||||||| || || |||||| || ||||| | || | ||||| ||
Sbjct 231 CAACGCTGGTACACCAAAGCCTCAAATGTCCTCCTGTTTCCTAGTTGCAATGAAGGATGA 172
Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450
|| || | |||||||| | ||| | | ||| ||||| || || || |||||
Sbjct 171 TTCCATTGAAGGTATCTACGACACTTTGAAGGAATGTGCTTTGATTTCCAAAACTGCTGG 112
Query 75451 GGGTATTGG 75459
||||||||
Sbjct 111 TGGTATTGG 103
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596539883376800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |