Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F000732305.1_202014-07-21] 3,985 sequences; 11,595,011 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq2589 181 1e-40 seq3120 82.4 9e-11 >seq2589 Length=927 Score = 181 bits (200), Expect = 1e-40 Identities = 475/713 (67%), Gaps = 24/713 (3%) Strand=Plus/Plus Query 75894 AATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGA 75953 || |||| ||||| ||||| ||||| | | | ||||||||||||||||||||| ||| Sbjct 171 AAGCACAAACGGAAACTGGTACACCCTTTGTTGTTTACAAGGATGCTTGTAACAGGAAAT 230 Query 75954 GTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGT 76013 ||||||||||| ||||| |||||| || || | ||| |||||| | || | Sbjct 231 CCAACCAAAAGAACTTGGGTGTTATCAAGTCGTCTAACTTGTGCTGTGAAATTGTTGAAT 290 Query 76014 ACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCA--AAGTA 76071 || | | | |||||||| |||||||| || ||||| || | || | ||| | || Sbjct 291 ACTCCGCTCCAGATGAGACTGCTGTTTGTAACTTGGCTTCTGTTGCTTTGCCAGCATTTA 350 Query 76072 TGTCAA----TGAAGAG------ACTCGCACTTTTGATTATGAAAAACTTCATGAAATCA 76121 | || |||||| ||| || | | | | |||| || |||||||| Sbjct 351 TTGAAACATCTGAAGACGGCAAAACTTCTACATATAACTTCAAAAAGCTACATGAAATTT 410 Query 76122 CAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCCCGTTGAGA 76181 | || || | || || ||||| || |||||| | || | |||||| || ||| Sbjct 411 CTAAAGTTATCACTCGTAACTTAAACAACGTTATTGACCGTAACTATTATCCTGTCGAGG 470 Query 76182 CTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGG 76241 || ||| ||||||||| ||||||| || |||| ||||||||| |||||| | || | Sbjct 471 AAGCAAGAAGATCTAATATGAGACACAGGCCGATTGCTTTGGGTGTCCAAGGTTTGGCTG 530 Query 76242 ATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGATGAAGCCAAGGAGA-TGAATGCT 76300 | || || |||| || | |||| || || || ||||| | | | | ||| Sbjct 531 ACACTTTCATGTTGTTGCGTTTACCATTCGACTCCGAAGAAGC-ACGCTTACTAAATATA 589 Query 76301 CGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCC 76360 | ||||||||||||||||| || || ||| |||| || |||||| | ||| || Sbjct 590 CAAATCTTTGAAACCATGTACCATGCTTCCATGGAAGCCTCTTGTGAGCTAGCTCAAAGA 649 Query 76361 CAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGAT 76420 | || | || || || || | || ||||| || || ||||| | ||||| || || Sbjct 650 GATGGCCCATACGAAACCTTCCAAGGCTCTCCAGCTTCTCAAGGTATACTTCAATTCGAC 709 Query 76421 ATGTGGGAAGGTGAAACC--AAGCTCAACTACGACTGGGATGTTCTCAAGGAACG-CATC 76477 ||||||| | | ||||| | | | | | || |||||| | | || || | |||| Sbjct 710 ATGTGGG-ACGAAAAACCTTACGGT-ATGTGGGATTGGGATACT-TTGAGAAATGACATC 766 Query 76478 AAGGAGAAGGGTCTTCGTAACAGTCTTT--TGATGGCACCAATGCCAACAGCCTCCACCG 76535 | | || | ||| || | ||| ||||| |||||||| ||||| || || ||||| Sbjct 767 ATGAAGCATGGTGTTAGAAAC--TCTTTGACCATGGCACCTATGCCTACTGCATCCACTT 824 Query 76536 CACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACATCTAC 76588 | || || || ||| | || || || || |||||| || | ||||| ||| Sbjct 825 CCCAGATTTTAGGTTACAACGAGTGTTTCGAACCAGTTACTTCCAACATGTAC 877 >seq3120 Length=488 Score = 82.4 bits (90), Expect = 9e-11 Identities = 169/249 (68%), Gaps = 2/249 (1%) Strand=Plus/Minus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 ||||| || | ||||| | ||||| | || || ||||| || ||||||| | | Sbjct 350 CCACAACACTTAATCATGAGAGTCGCCTTAGGTATTCACGGTGATAACATTGAGGCCGCT 291 Query 75272 TTGGAGACATACGACAAGATGTCCC-AAGGTATGTTCATTCACGCAACACCAACCCTCTT 75330 | || || || || |||||||| || || || | |||||| | ||||| | || Sbjct 290 CTAGAAACCTATAACTTGATGTCCCTAAAATACTTT-ACTCACGCCTCTCCAACTTTATT 232 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 ||| ||||||||||||| || || |||||| || ||||| | || | ||||| || Sbjct 231 CAACGCTGGTACACCAAAGCCTCAAATGTCCTCCTGTTTCCTAGTTGCAATGAAGGATGA 172 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 || || | |||||||| | ||| | | ||| ||||| || || || ||||| Sbjct 171 TTCCATTGAAGGTATCTACGACACTTTGAAGGAATGTGCTTTGATTTCCAAAACTGCTGG 112 Query 75451 GGGTATTGG 75459 |||||||| Sbjct 111 TGGTATTGG 103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596539883376800