Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F000732305.1_202014-07-21]
3,985 sequences; 11,595,011 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq3120 147 6e-30
seq1567 118 3e-21
seq2589 113 1e-19
seq1165 113 1e-19
seq203 93.3 1e-13
seq4 91.5 4e-13
seq1156 87.8 5e-12
>seq3120
Length=488
Score = 147 bits (162), Expect = 6e-30
Identities = 291/431 (68%), Gaps = 0/431 (0%)
Strand=Plus/Plus
Query 156084 GCAGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCG 156143
||||| || |||||||||| | ||||||||| | || || ||||| || || || ||
Sbjct 1 GCAGTGTTGTTGAAGACACGGATCATAGGAATTAACCCGTTAGAAGTCCCGTTCGTACCA 60
Query 156144 CGAATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCAT 156203
||| | || || | || |||| || ||||||||||| ||||||||||| | |
Sbjct 61 GCAATGTAAGAGCCGGTTGCACGAATGTTGTGAATATGTAGACCAATACCACCAGCAGTT 120
Query 156204 TTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCC 156263
|| ||||| ||| |||||||| | ||| | | | ||||||||||| |||||||| | |
Sbjct 121 TTGGAAATCAAAGCACATTCCTTCAAAGTGTCGTAGATACCTTCAATGGAATCATCCTTC 180
Query 156264 ATTGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTA 156323
|||| | ||| | || || | |||||| |||||| ||||||||||||| ||
Sbjct 181 ATTGCAACTAGGAAACAGGAGGACATTTGAGGCTTTGGTGTACCAGCGTTGAATAAAGTT 240
Query 156324 GGTGTTGCATGAATAAAATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCA 156383
|| | || ||| |||| || || ||||| | | || || || | ||||
Sbjct 241 GGAGAGGCGTGAGTAAAGTATTTTAGGGACATCAAGTTATAGGTTTCTAGAGCGGCCTCA 300
Query 156384 AGATTAGACCCGTGAATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACA 156443
| ||| |||||||||| | | ||| ||||| | || || ||||| || ||
Sbjct 301 ATGTTATCACCGTGAATACCTAAGGCGACTCTCATGATTAAGTGTTGTGGACGTTCAGCA 360
Query 156444 ATCACTCCATCAATTCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATAATCA 156503
| || | | || || | ||| | ||||| | ||||||||| ||||| |||
Sbjct 361 ACTTGACCGTTGACTCTCAATAAGTACGAACGTTCTAAAGTTTTAAAACCGAAGTAACTG 420
Query 156504 AACAGAAAATC 156514
|| |||||||
Sbjct 421 TACTGAAAATC 431
>seq1567
Length=2367
Score = 118 bits (130), Expect = 3e-21
Identities = 291/440 (66%), Gaps = 1/440 (0%)
Strand=Plus/Plus
Query 156060 TTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATA 156119
|| ||||| || || || || || ||||| || |||||||||| | ||| ||||| |
Sbjct 1403 TTACCACCTTGGTCCACGTAACGTGCAGTGTTGTTGAAGACACGGATCATGGGAATCAAC 1462
Query 156120 CCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAATA 156179
|| || ||||| || ||||| || ||||| || || | || |||| ||| | |||
Sbjct 1463 CCGTTTGAAGTACCGTTGGTACCTGCAATATAAGAGCCTGTGGAACGAATATTGTTGATA 1522
Query 156180 TGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAA 156239
|| || |||| |||||||| || ||||| || || || || | ||| | | ||
Sbjct 1523 TGAAGACCAACACCACCTGCAGTCTTGGAAATCATGGCACACTCTTTCAAAGTGTCGTAA 1582
Query 156240 ATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCGT 156299
||||||||||| || || || | ||| | | || | || ||| | |||||| ||
Sbjct 1583 ATACCTTCAATGGAGTCGTCCTTCATGGCAATCAGGAAACAAGAAGACATTTGAGGATGT 1642
Query 156300 GGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACATATAA 156359
|| || || || || |||||||| || | || || | || || | ||||| |
Sbjct 1643 GGCGTACCGGCATTAAATAGTGTGGGGGAAGCGTGGGTGAAGTATCTCAACGACATCAAG 1702
Query 156360 TCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAGATAGAGACCCTCATC 156419
| ||| |||| | | ||| | || |||||||||| | | || | |||
Sbjct 1703 TTGTAAGTCTTCAGCACGGACTCGATATCGCTGCCGTGAATACCTAGGGCCACACGCATG 1762
Query 156420 CACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAAGGTATGCGCGTTCC 156479
|| ||| || ||||| || | | | || || | || || ||||| | ||||||
Sbjct 1763 ACCAAATGTTGGGGACGTTCGGCCACTTCACCGTCTAGTCTTAGCAGGTA-GAACGTTCC 1821
Query 156480 AGAGTTTTAAACCCGAAATA 156499
||||| |||||||| |||||
Sbjct 1822 AGAGTCTTAAACCCAAAATA 1841
>seq2589
Length=927
Score = 113 bits (124), Expect = 1e-19
Identities = 128/169 (76%), Gaps = 2/169 (1%)
Strand=Plus/Minus
Query 155587 CAATAGACGCCAGATTACATACCGCAGTCTCCT-TGTCGTCGCTGTATTCTACAATCTCA 155645
||| ||| |||| ||||| || |||||||| | || | || |||||| ||||| |||
Sbjct 335 CAACAGAAGCCAAGTTACAAACAGCAGTCTCATCTGGAG-CGGAGTATTCAACAATTTCA 277
Query 155646 CAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAA 155705
||||||| |||||| |||||| || || ||||| ||||| ||||| |||||||||
Sbjct 276 CAGCACAAGTTAGACGACTTGATAACACCCAAGTTCTTTTGGTTGGATTTCCTGTTACAA 217
Query 155706 GCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCA 155754
||||||||||| | || | || || || || ||| | ||||| ||||
Sbjct 216 GCATCCTTGTAAACAACAAAGGGTGTACCAGTTTCCGTTTGTGCTTCCA 168
>seq1165
Length=3371
Score = 113 bits (124), Expect = 1e-19
Identities = 110/142 (77%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 302539 TTTCTTACGGTCATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGC 302598
|||||| ||| | || ||| || ||| || ||||| | | |||| |||||||||
Sbjct 654 TTTCTTGTGGTGTTGTCGTAATGAACCATGATATCTTCTAGAGCTTTGACTAAACGACGT 713
Query 302599 TGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCC 302658
||||||||||| ||| || ||| || ||||| ||||| || ||||| |||||||||||
Sbjct 714 TGAATATAACCTGTTTCAGCTGTCTTAACAGCAGTATCGATAAGACCTTCACGACCACCC 773
Query 302659 ATAGCATGGAAGAATAGCTCTT 302680
|| ||||||||||| | |||||
Sbjct 774 ATTGCATGGAAGAAAAACTCTT 795
>seq203
Length=9829
Score = 93.3 bits (102), Expect = 1e-13
Identities = 301/461 (65%), Gaps = 10/461 (2%)
Strand=Plus/Minus
Query 233259 TTAAAAATGTTGTAGCACCGTGAGCAATCATACAATCACGTTCCATTTCACCAATACGCA 233318
|||| |||| | |||||||| || |||||||||||||||||||||||||||| | |
Sbjct 9645 TTAAGAATGAAGCGGCACCGTGTGCGATCATACAATCACGTTCCATTTCACCAAATCTTA 9586
Query 233319 GACCACCATCATTTGACCTACCCTGGACTGTTTGACGAGTTAAAACAGTTCTTGGACCCT 233378
|||||| || |||| ||||| | || | ||| | |||||||| |||||||
Sbjct 9585 AACCACCGTCTCTTGATCTACCTTCCACCGGTTGTCTTGTTAAAACTTGCATTGGACCAC 9526
Query 233379 GAGCACGATAATTAATTTTATCTTTAACCATATGCTTCAGTCTCATATAATAACACGGAC 233438
| || | || ||| || || | |||||||| | | | ||||| ||||
Sbjct 9525 GGGCTCTGGCATGAATCTTGTCATCCACCATATGTCTTAAACGTTGGTAATATGTAGGAC 9466
Query 233439 CAATAAATAGTTCTGCGTGTAATTGTTCCCCAGATTCACCGCTGTATAAAACTTCATTAC 233498
||| || | || || ||||| || || | | ||| |||| | ||||||| |
Sbjct 9465 CAAAGAAGATTTGAGCCATTAATTTTTTACCTGTGTGACCATTGTACATAACTTCAAACC 9406
Query 233499 C-CGATGAATTGTAACCAATATCTTTTAATAGAGAACCAAATACCTGATGCTTTGGACCT 233557
| ||| || | ||||||| || ||||| | | ||||| | || |
Sbjct 9405 CACGA-GATTGGTAACCATGTTCACGTAATA-ATTTAGATATACCCTCTACTGT-----A 9353
Query 233558 TTATTAGCAAACGCAGTACAATCACCAAAACCACCATACGTCGCACACGCTTTACCCATT 233617
| | | ||| | || | |||||| |||| | ||| | | |||| || |
Sbjct 9352 ATGTCTGTAAATGGAGAAGCATCACCTTCGTTACCAGATAATGCAGCCACCTTACTCAAT 9293
Query 233618 AAAGTTTCTATCAACTGACCGATAGTCATTCTACTTGGTAGAGCGTGTGGATTGATAATT 233677
||| ||| || || || | | |||||| | | ||| | ||| || ||||||||||||
Sbjct 9292 AAACATTCGATTAAATGCGCCACAGTCATACGAGATGGAATAGCATGAGGATTGATAATT 9233
Query 233678 AAATCTGG-ACGTACTCCCTCCGATGTAAAAGGCATATCTT 233717
|||||||| ||| | || || | |||||| ||||||||||
Sbjct 9232 AAATCTGGTACG-ATACCTTCTGCTGTAAATGGCATATCTT 9193
Score = 91.5 bits (100), Expect = 4e-13
Identities = 370/571 (65%), Gaps = 14/571 (2%)
Strand=Plus/Minus
Query 251424 ACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGACCCTTGGTGAAGCGAGA 251483
||| | ||| || ||| ||||||| ||||| || || | |||| ||| ||
Sbjct 9692 ACAAATATGAACTCTGAAAGCATCGGATGCTTCCATTAATCTTTCCTTTAAGAATGAAGC 9633
Query 251484 TGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCG 251543
|||||||||| |||||||||||||| ||||||||||| || | | |||||| || |
Sbjct 9632 GGCACCGTGTGCGATCATACAATCACGTTCCATTTCACCAAATCTTAAACCACCGTCTCT 9573
Query 251544 AGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATG 251603
| ||||| || | || || | || | | ||| ||||| || | | |||
Sbjct 9572 TGATCTACCTTCCACCGGTTGTCTTGTTAAAACTTGCATTGGACCACGGGCTCTGGCATG 9513
Query 251604 TTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGATGCT 251663
||| |||| |||||||| | | ||| ||||| ||| ||||| | |||||| |
Sbjct 9512 AATCTTGTCATCCACCATATGTCTTAAACGTTGGTAATATGTAGGACCAAAGAAGAT--T 9455
Query 251664 CGAAGGCATTTGCTCT---CCAGTTAGAGCGTTATACATAACTTCGTTTCCATTAGATTC 251720
|| | |||| | | || || || | || ||||||||||| ||| |||||
Sbjct 9454 TGA-GCCATTAATTTTTTACCTGTGTGACCATTGTACATAACTTCAAACCCACGAGATTG 9396
Query 251721 ATAACCAAGTTTCTGTAGCTCTGAAGCAATATCACCAATCTTGAATTTGCTAAAACTGGT 251780
|||||| ||| ||| | || ||| | | | || ||| | || || |||
Sbjct 9395 GTAACCATGTTCACGTAATAATTTAGATATACCCTCTA-CTGTAATGT-CTGTAAATGGA 9338
Query 251781 GCCG--TCTCCGTAAAGACCCATTTGAATCAAC-ACTTTGCCTAAAAGTGTCTCTTTCAG 251837
| | || || | ||| | | | || | || || | || | || | |
Sbjct 9337 GAAGCATCACCTTCGTTACC-AGATAATGCAGCCACCTTACTCAATAAACATTCGATTAA 9279
Query 251838 TTGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAG 251897
|| || | |||||||||| ||||||||||| |||||||| || | || ||| |
Sbjct 9278 ATGCGCCACAGTCATACGAGATGGAATAGCATGAGGATTGATAATTAAATCTGGTACGAT 9219
Query 251898 TCCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATA-ATGTTTCCAATAGTTCCCTTTT 251956
|| || || || || ||||||| ||| || | ||| || | |||||||| |||||||
Sbjct 9218 ACCTTCTGCTGTAAATGGCATAT-CTTCTCTACGATATGTGATACCAATAGTACCCTTTT 9160
Query 251957 GTCCGTGACGAGAACTGAACTTATCACCAAT 251987
| || ||||||||| ||| || ||||| ||
Sbjct 9159 GACCATGACGAGAAGCGAATTTGTCACCGAT 9129
>seq4
Length=23134
Score = 91.5 bits (100), Expect = 4e-13
Identities = 133/188 (71%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 233273 GCACCGTGAGCAATCATACAATCACGTTCCATTTCACCAATACGCAGACCACCATCATTT 233332
||||| | |||||| | |||||| | |||||||||||| | | |||||||||||| |
Sbjct 17322 GCACCATAAGCAATGACACAATCTCTTTCCATTTCACCTAATCTCAGACCACCATCTCTA 17263
Query 233333 GACCTACCCTGGACTGTTTGACGAGTTAAAACAGTTCTTGGACCCTGAGCACGATAATTA 233392
|||||||| | | |||||| || || || | ||| ||||| |||| | |
Sbjct 17262 GACCTACCTTCAGTAGGTTGACGCGTCAAGACCGCTCTAGGACCACGAGCTCTTGCGTGC 17203
Query 233393 ATTTTATCTTTAACCATATGCTTCAGTCTCATATAATAACACGGACCAATAAATAGTTCT 233452
|| |||||| ||||||||||||| | | ||||||| || |||| ||| | | |
Sbjct 17202 ATCTTATCTAAGACCATATGCTTCAATTTTTGATAATAAATTGGCCCAAAAAAGATATAT 17143
Query 233453 GCGTGTAA 233460
|| |||||
Sbjct 17142 GCTTGTAA 17135
>seq1156
Length=3379
Score = 87.8 bits (96), Expect = 5e-12
Identities = 246/377 (65%), Gaps = 3/377 (1%)
Strand=Plus/Plus
Query 288850 CTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCT 288909
|||||||| ||||| | | ||| ||| || | || |||| || || || |
Sbjct 989 CTATCAAATCTACCGGGTCTTAATAAGGCTTTATCAAGGATGTCGGGCCTATTAGTACCA 1048
Query 288910 GCCAATACAACAATAGATTCGGTTTGCTTAAATCCATCCATACTTGTTAAAATTTGATTA 288969
||||| ||||||| | || | | | |||| |||||||| || ||||||||
Sbjct 1049 GCCAAGACAACAACATGATCAGCTGGAGTAAAACCATCCATTTCCACCAACATTTGATTC 1108
Query 288970 AGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCtttttttA 289029
| ||| | ||| ||||||||||| | |||| ||| ||| | || |||
Sbjct 1109 AATGTGTTTTCTCTTTCATCATTAGCACCTGAAAAATTACC---TTTTTGTCTAGCTTTC 1165
Query 289030 CCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGCA 289089
|| | |||||||||||||||||| || | | | |||| |||| || ||| ||
Sbjct 1166 CCGATAGCATCAATTTCGTCAATAAACACAATCGAAGGAGCGTTTTCCCTTGCAGTTTTG 1225
Query 289090 AATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGCG 289149
|| || |||||||| | | || || | ||| ||| ||||||| ||||| || ||| ||
Sbjct 1226 AACAAATCTCTTACCCTTGCAGCACCGACACCTACAAACATTTCAACAAACTCTGAACCG 1285
Query 289150 GATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTA 289209
|| || | ||||| || || || || || ||| |||| || | || |||
Sbjct 1286 GAAACAAAATAGAATGGGACGCCGGCCTCACCGGCGGTAGCCTTCGCAAGCAAGGTTTTA 1345
Query 289210 CCTGTTCCAGGTGGTCC 289226
|| || || ||||| ||
Sbjct 1346 CCGGTACCTGGTGGACC 1362
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471742452212945
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