Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F000732305.1_202014-07-21] 3,985 sequences; 11,595,011 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq1401 111 2e-18 >seq1401 Length=2725 Score = 111 bits (122), Expect = 2e-18 Identities = 274/416 (66%), Gaps = 0/416 (0%) Strand=Plus/Minus Query 18067 ACATTCGGCAAGGTATTTAGGGTCACCACCTTTGGCGAGTCGCACGGGGCGGGCGTCGGC 18126 || || || ||| | || | |||||||| | ||| || ||||| | | |||||| Sbjct 1173 ACGTTTGGAAAGCTGTTCCGTGTCACCACGTATGGTGAATCGCATTGCCGGTCCGTCGGA 1114 Query 18127 TGCATCATCGACGGCGTGCCGCCGTGCATGCCACTGGCCGAGGCCGACATCCAGCCTCAG 18186 ||||| ||||||| || || || | ||| || || | || | || |||||||| ||| Sbjct 1113 TGCATTGTCGACGGTGTCCCCCCAGGAATGTCATTGACTGAAGAAGATATCCAGCCGCAG 1054 Query 18187 TTGGATCGGCGCCGACCGGGCCAGGGCGCACTTTCCACGCCGCGCAACGAGCCCGATCGC 18246 || || | ||||||||||| || ||||| || | ||||| || || Sbjct 1053 TTAACCAGGAGAAGACCGGGCCAGTCTAAGCTGTCCACCCCCAGGGACGAGAAGGACCGA 994 Query 18247 GTCATCATCCAGTCGGGCACGGAGAACGGCCTCACGCTCGGCTCGCCCGTCGGCCTCTTT 18306 || |||||| | || || ||| |||| ||||| ||| ||||| ||| | | | Sbjct 993 GTGGAGATCCAGGCCGGTACCGAGTTCGGCAAGACGCTGGGCACGCCCATCGCCATGATG 934 Query 18307 GTGGCCAACCGCGACCAGCGGCCCGTCGACTATTCCGACATGTGCAAGGTGCCGCGGCCC 18366 | ||| || || ||||| ||||| ||||||||| |||| | || | ||| Sbjct 933 ATCAAGAACGAGGATCACAGGCCCCATGACTACTCCGACATGGACAAGTTCCCCAGACCC 874 Query 18367 TCACACGCCGACTACACCTACATGGCCAAGTACGGCATCAAGGCGTCGTCGGGCGGAGGC 18426 || || || |||| ||| ||| | |||||||| |||||||| || || || || || Sbjct 873 TCTCATGCGGACTTCACGTACTCCGAGAAGTACGGGATCAAGGCCTCTTCCGGTGGTGGT 814 Query 18427 CGGTCGTCTGCCCGCGAGACCCTCATGCGCGTCGCCGCCGGCGCGGTCGCCGAGAA 18482 | |||||||| | || || | || ||||| | || ||| | || ||||| Sbjct 813 AGAGCGTCTGCCAGGGAAACGATTGGACGTGTCGCTTCTGGTGCGATTGCTGAGAA 758 Score = 91.5 bits (100), Expect = 2e-12 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 19045 AGGACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCG 19104 ||||| |||||| || || || || ||| | ||| |||| | || || || | Sbjct 545 AGGACTCCATCGGTGGTGTTGTCACCTGTGTGGTGAGAAACTTGCCCACCGGTCTTGGTG 486 Query 19105 AGCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCA 19164 |||| || ||||||||| | || ||| ||| || |||||||||||||| |||||||| Sbjct 485 AGCCATGTTTTGACAAGTTGGAAGCCATGCTGGCTCACGCCATGCTGTCCATCCCGGCAT 426 Query 19165 CCAAGGGATTCGAGATTGGC 19184 ||||||| |||||||| ||| Sbjct 425 CCAAGGGGTTCGAGATCGGC 406 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106812172238245