Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F000732305.1_202014-07-21]
3,985 sequences; 11,595,011 total letters
Query= NC_021901.1
Length=197693
Score E
Sequences producing significant alignments: (Bits) Value
seq131 102 1e-16
seq203 82.4 1e-10
>seq131
Length=11630
Score = 102 bits (112), Expect = 1e-16
Identities = 237/355 (67%), Gaps = 2/355 (1%)
Strand=Plus/Plus
Query 172400 AGAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGTGT 172459
|||| | |||||| || | ||| | || ||| | || | ||| ||| ||||||
Sbjct 8775 AGAATTATTATGGTTTGTAGCCGGTGCTACAGATGCTAATCTCTTATCTGAGCAAGGTGT 8834
Query 172460 TAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTACTGAAAG 172519
||| | ||| | | |||||| |||||||||| || ||| ||| | || || ||
Sbjct 8835 AAAAATCTGGGACGGTAATGGGTCTCGTGAATACTTGGATAAGATTGGGCTCACGGATAG 8894
Query 172520 AAAAGAAGGTGATTTAGGCCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTCAATA 172579
||||| ||| || | ||||| ||||||| || |||||||||||| || || |||||
Sbjct 8895 AAAAGTAGGAGACCTGGGCCCCGTTTATGGGTTCCAATGGAGACATTTCGGTGCCCAATA 8954
Query 172580 TATCGAC-TGTGATACAGATTACACAGGACAAGGAGTGGACCAATTAAGTCAAACTATTA 172638
| ||| || ||| || || || |||||||| | || || | | || |||
Sbjct 8955 CA-AGACGTGCGATGATGACTATACCGGACAAGGCATCGATCAGCTGAAGCAGGTTATAC 9013
Query 172639 ATACTTTACAAAACAACCCAGAAAGTAGAAGGATGTTAATTGATAGTTGGAATGTACCTC 172698
| | ||| ||| ||||| | ||||||||| | || | ||||||| |
Sbjct 9014 ACAAATTAAAAACAAACCCTTACGATAGAAGGATCATCATGAGTGCTTGGAATCCTGCAG 9073
Query 172699 AACTTGATAAAATGGTTCTTCCTCCTTGCCATACTTTAGCACAATTTTATGTCAG 172753
| |||| || |||| | | || || ||||||| ||| |||| |||||||||||
Sbjct 9074 ATTTTGACAAGATGGCTTTACCACCATGCCATATTTTTTCACAGTTTTATGTCAG 9128
>seq203
Length=9829
Score = 82.4 bits (90), Expect = 1e-10
Identities = 108/147 (73%), Gaps = 2/147 (1%)
Strand=Plus/Plus
Query 194242 CCTGAAATAGGGGATAAATTTTGTTCGGGA-ATGGCTCAAAAAGGAACTTGTGGTATGAT 194300
||| |||| || || ||||| ||| | |||| |||||| || ||| |||||| |
Sbjct 9123 CCTCAAATCGGTGACAAATTCGCTTCTCGTCATGG-TCAAAAGGGTACTATTGGTATCAC 9181
Query 194301 TTATTCACAAGAAGATATGCCATTTACAACTTCAGGTATGGTACCAGATATTATTATCAA 194360
||| ||||||||||||||||||| | |||||| ||||||||| | ||||||||
Sbjct 9182 ATATCGTAGAGAAGATATGCCATTTACAGCAGAAGGTATCGTACCAGATTTAATTATCAA 9241
Query 194361 TCCAAATTGTATTCCGTCCAGAATGAC 194387
||| || |||||| || | |||||
Sbjct 9242 TCCTCATGCTATTCCATCTCGTATGAC 9268
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 632458094111800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |