Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F000732305.1_202014-07-21] 3,985 sequences; 11,595,011 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq131 102 1e-16 seq203 82.4 1e-10 >seq131 Length=11630 Score = 102 bits (112), Expect = 1e-16 Identities = 237/355 (67%), Gaps = 2/355 (1%) Strand=Plus/Plus Query 172400 AGAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGTGT 172459 |||| | |||||| || | ||| | || ||| | || | ||| ||| |||||| Sbjct 8775 AGAATTATTATGGTTTGTAGCCGGTGCTACAGATGCTAATCTCTTATCTGAGCAAGGTGT 8834 Query 172460 TAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTACTGAAAG 172519 ||| | ||| | | |||||| |||||||||| || ||| ||| | || || || Sbjct 8835 AAAAATCTGGGACGGTAATGGGTCTCGTGAATACTTGGATAAGATTGGGCTCACGGATAG 8894 Query 172520 AAAAGAAGGTGATTTAGGCCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTCAATA 172579 ||||| ||| || | ||||| ||||||| || |||||||||||| || || ||||| Sbjct 8895 AAAAGTAGGAGACCTGGGCCCCGTTTATGGGTTCCAATGGAGACATTTCGGTGCCCAATA 8954 Query 172580 TATCGAC-TGTGATACAGATTACACAGGACAAGGAGTGGACCAATTAAGTCAAACTATTA 172638 | ||| || ||| || || || |||||||| | || || | | || ||| Sbjct 8955 CA-AGACGTGCGATGATGACTATACCGGACAAGGCATCGATCAGCTGAAGCAGGTTATAC 9013 Query 172639 ATACTTTACAAAACAACCCAGAAAGTAGAAGGATGTTAATTGATAGTTGGAATGTACCTC 172698 | | ||| ||| ||||| | ||||||||| | || | ||||||| | Sbjct 9014 ACAAATTAAAAACAAACCCTTACGATAGAAGGATCATCATGAGTGCTTGGAATCCTGCAG 9073 Query 172699 AACTTGATAAAATGGTTCTTCCTCCTTGCCATACTTTAGCACAATTTTATGTCAG 172753 | |||| || |||| | | || || ||||||| ||| |||| ||||||||||| Sbjct 9074 ATTTTGACAAGATGGCTTTACCACCATGCCATATTTTTTCACAGTTTTATGTCAG 9128 >seq203 Length=9829 Score = 82.4 bits (90), Expect = 1e-10 Identities = 108/147 (73%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 194242 CCTGAAATAGGGGATAAATTTTGTTCGGGA-ATGGCTCAAAAAGGAACTTGTGGTATGAT 194300 ||| |||| || || ||||| ||| | |||| |||||| || ||| |||||| | Sbjct 9123 CCTCAAATCGGTGACAAATTCGCTTCTCGTCATGG-TCAAAAGGGTACTATTGGTATCAC 9181 Query 194301 TTATTCACAAGAAGATATGCCATTTACAACTTCAGGTATGGTACCAGATATTATTATCAA 194360 ||| ||||||||||||||||||| | |||||| ||||||||| | |||||||| Sbjct 9182 ATATCGTAGAGAAGATATGCCATTTACAGCAGAAGGTATCGTACCAGATTTAATTATCAA 9241 Query 194361 TCCAAATTGTATTCCGTCCAGAATGAC 194387 ||| || |||||| || | ||||| Sbjct 9242 TCCTCATGCTATTCCATCTCGTATGAC 9268 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632458094111800